##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527829_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7998891 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31990747217333 33.0 31.0 34.0 31.0 34.0 2 32.689183163015976 34.0 31.0 34.0 31.0 34.0 3 32.95254879707699 34.0 31.0 34.0 31.0 34.0 4 36.38836471205821 37.0 37.0 37.0 35.0 37.0 5 36.43852891607099 37.0 37.0 37.0 35.0 37.0 6 36.1467829727896 37.0 37.0 37.0 35.0 37.0 7 36.55565952830211 37.0 37.0 37.0 35.0 37.0 8 36.62822921327469 37.0 37.0 37.0 35.0 37.0 9 38.55554538747934 39.0 39.0 39.0 37.0 39.0 10 37.89581630753563 39.0 38.0 39.0 35.0 39.0 11 36.81250650871477 39.0 35.0 39.0 33.0 39.0 12 36.55235019454572 39.0 35.0 39.0 33.0 39.0 13 36.349529703555156 39.0 35.0 39.0 33.0 39.0 14 37.204008280647905 40.0 35.0 40.0 33.0 40.0 15 37.31731411266887 40.0 35.0 40.0 33.0 40.0 16 37.40334441361934 40.0 35.0 40.0 33.0 40.0 17 37.2819653374449 40.0 35.0 40.0 33.0 40.0 18 37.30619832174235 40.0 35.0 40.0 33.0 40.0 19 37.27246051983956 40.0 35.0 40.0 33.0 40.0 20 37.24691022793035 40.0 35.0 40.0 33.0 40.0 21 37.286876768292004 40.0 35.0 40.0 33.0 40.0 22 37.19416679137145 40.0 35.0 40.0 33.0 40.0 23 37.224616887516035 40.0 35.0 40.0 33.0 40.0 24 37.258585596428304 40.0 35.0 40.0 33.0 40.0 25 37.20984471472358 39.0 35.0 40.0 33.0 40.0 26 37.04693088079335 39.0 35.0 40.0 33.0 40.0 27 36.97871492435639 39.0 35.0 40.0 33.0 40.0 28 36.885782416587496 39.0 35.0 40.0 33.0 40.0 29 36.839238964501455 39.0 35.0 40.0 32.0 40.0 30 36.67380265589318 39.0 35.0 40.0 32.0 40.0 31 36.58852370909917 39.0 35.0 40.0 31.0 40.0 32 36.54021076171684 38.0 35.0 40.0 32.0 40.0 33 36.28420427281732 38.0 35.0 40.0 31.0 40.0 34 36.04009055755354 38.0 35.0 40.0 30.0 40.0 35 36.070857322596346 38.0 35.0 40.0 30.0 40.0 36 36.04712090713575 38.0 35.0 40.0 30.0 40.0 37 36.13527637768786 38.0 35.0 40.0 31.0 40.0 38 35.81195318200986 38.0 35.0 40.0 30.0 40.0 39 35.88670729479874 38.0 35.0 40.0 30.0 40.0 40 35.78769431912499 38.0 34.0 40.0 30.0 40.0 41 35.47439751335529 37.0 34.0 40.0 29.0 40.0 42 35.56378065409317 37.0 34.0 40.0 30.0 40.0 43 35.588454699532726 37.0 34.0 40.0 30.0 40.0 44 35.48556731176859 37.0 34.0 40.0 30.0 40.0 45 35.363328991481445 37.0 34.0 40.0 29.0 40.0 46 35.02403970750445 36.0 34.0 40.0 28.0 40.0 47 34.76913262100959 36.0 34.0 40.0 27.0 40.0 48 34.789042506017395 36.0 34.0 40.0 27.0 40.0 49 34.81106380872048 35.0 34.0 40.0 28.0 40.0 50 34.687623446800316 35.0 34.0 39.0 28.0 40.0 51 35.01720501004452 35.0 34.0 40.0 29.0 40.0 52 34.78629274983245 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 6.0 14 16.0 15 100.0 16 316.0 17 911.0 18 1894.0 19 3499.0 20 6057.0 21 9493.0 22 14520.0 23 21187.0 24 29904.0 25 41167.0 26 53748.0 27 69562.0 28 89858.0 29 114820.0 30 148329.0 31 195329.0 32 265428.0 33 413650.0 34 902186.0 35 674392.0 36 669138.0 37 1093818.0 38 2190006.0 39 989553.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.46060022570629 0.44036104504987006 0.07321014875687142 0.025828580486970006 8 99.22766793546755 0.6057339698715735 0.07752324666006825 0.08907484800080412 9 93.16018933124604 3.525888776331619 2.035057109791845 1.2788647826304922 10 48.47314458966874 38.10730762551959 6.1959964200037225 7.223551364807947 11 38.180755307204464 21.278774770152513 24.45043944216767 16.090030480475356 12 34.29155366662703 16.660046999015236 24.55781682735769 24.490582507000035 13 27.03060961825833 17.03139847761396 27.461869401645806 28.476122502481903 14 25.627502612549662 18.991870248013132 29.590439474672177 25.79018766476503 15 28.609265959493634 20.321179523511447 26.885151954189652 24.184402562805268 16 34.40928248678473 21.020288937553968 23.38541680340437 21.185011772256928 17 31.201937868637042 21.148094154552176 24.776797183509565 22.87317079330122 18 30.65192412298155 20.73496188409118 24.721539523416432 23.891574469510836 19 28.995894555882813 24.98918912634264 23.136132246332647 22.878784071441906 20 30.93653857766033 23.84275520193987 23.351324577369535 21.869381643030263 21 29.656523635588982 24.051559147386804 24.594821957193815 21.697095259830395 22 27.21613533676106 21.439722081473544 27.708391075712868 23.63575150605253 23 28.41412640827335 21.682755772018897 26.904092079764556 22.9990257399432 24 30.153892583359372 21.85888018726596 24.036657081587933 23.95057014778674 25 27.919557848706777 23.01984112547602 22.74329028861626 26.317310737200945 26 25.149286319816085 23.529874328828836 25.869823704311013 25.451015647044073 27 24.73690415333826 21.00634950520016 25.16252565511894 29.09422068634264 28 25.324135558291765 24.852870229135515 23.508433856643375 26.314560355929338 29 29.420703445015068 23.965784756911926 22.31418080331386 24.29933099475915 30 28.207072705453797 21.486741099484917 25.9822892948535 24.323896900207792 31 30.701080937344937 21.80320996998209 24.34645002663494 23.14925906603803 32 32.54224866922177 21.985697767353 23.216843434921167 22.255210128504064 33 32.52020811384978 21.808023137207392 23.45341372947825 22.21835501946457 34 27.424364202487574 22.96222063783592 28.192845733239768 21.42056942643674 35 25.32127266142269 27.67286115037697 26.000016752322292 21.005849435878048 36 25.986264845964275 29.078280976700395 23.245947469467957 21.68950670786738 37 29.049389471615505 26.696788342283952 21.608232941291487 22.64558924480906 38 28.095719769153 27.78172624180027 21.89819813771684 22.22435585132989 39 29.875916548931595 24.697536195955163 22.067221568589947 23.359325686523295 40 27.486222777632552 23.760718829647757 22.00425033920327 26.74880805351642 41 24.526224947933407 26.69126257627464 22.482104081678322 26.300408394113635 42 23.45213855270687 24.105954187899297 23.353287349458817 29.088619909935016 43 23.732077359223922 22.761930372597902 24.31805859087216 29.187933677306017 44 24.896638796553173 22.510958081564056 23.8119259282318 28.78047719365097 45 27.548168864908902 23.558903352977307 22.88099687819224 26.011930903921552 46 26.047385818859137 26.547942708557976 22.31226803815679 25.092403434426096 47 24.263588539961354 24.927380558129872 24.516748634279427 26.292282267629353 48 25.252475624433433 23.307893556744304 26.70017631194124 24.739454506881017 49 28.513852732835087 22.686132365099112 24.569718477223905 24.230296424841892 50 24.839705904230975 23.45535149810142 24.42359822130343 27.281344376364174 51 23.51120924138109 23.60480971674698 26.570070776061332 26.3139102658106 52 23.58114393607814 23.658617175805997 25.65350621729937 27.10673267081649 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 5.0 8 10.0 9 86.5 10 163.0 11 399.0 12 635.0 13 3010.0 14 11495.0 15 17605.0 16 21180.5 17 24756.0 18 21244.5 19 17733.0 20 17588.5 21 17444.0 22 18929.0 23 20414.0 24 20355.0 25 20296.0 26 22775.5 27 25255.0 28 30627.0 29 35999.0 30 43256.5 31 50514.0 32 59314.0 33 68114.0 34 78580.0 35 89046.0 36 100562.5 37 112079.0 38 123820.0 39 152518.0 40 169475.0 41 185412.0 42 201349.0 43 208879.0 44 216409.0 45 238955.0 46 261501.0 47 274581.0 48 287661.0 49 309294.0 50 330927.0 51 350922.5 52 370918.0 53 395442.0 54 419966.0 55 439972.0 56 459978.0 57 495768.0 58 531558.0 59 570084.5 60 608611.0 61 635394.5 62 662178.0 63 689164.5 64 739010.0 65 761869.0 66 625044.0 67 488219.0 68 402318.0 69 316417.0 70 260084.0 71 203751.0 72 169376.5 73 135002.0 74 113642.5 75 92283.0 76 79338.0 77 66393.0 78 51423.5 79 36454.0 80 24259.0 81 12064.0 82 8542.0 83 5020.0 84 3947.5 85 2875.0 86 1769.0 87 663.0 88 384.0 89 71.5 90 38.0 91 25.5 92 13.0 93 15.5 94 18.0 95 17.0 96 16.0 97 8.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 7998891.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.0656220194135 #Duplication Level Percentage of deduplicated Percentage of total 1 69.22964291574928 5.58380132297401 2 9.558676346920834 1.541933408403433 3 3.982725230504313 0.9636946894928787 4 1.9681770768207998 0.6349828947564294 5 1.0991612201922116 0.44327094702338543 6 0.6632716148615649 0.32098188850076326 7 0.4385830154271769 0.24762113785991458 8 0.3460234013120807 0.22327151718840574 9 0.25997349542249143 0.1887163154229187 >10 5.366723566194789 12.788605952921495 >50 4.366467073347221 25.065558704472444 >100 2.5964272170208647 36.77615732615927 >500 0.0849687070409541 4.559508094049401 >1k 0.034987114663535115 5.278215551261447 >5k 0.002740926033548834 1.5168320430140863 >10k+ 0.0014510784883493828 3.866848206499641 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 117320 1.4667033217479772 No Hit CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 55684 0.6961465033090212 No Hit CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 30028 0.3754020401078099 No Hit CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 20846 0.2606111272175105 No Hit CGCTTGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 20313 0.25394770350039775 No Hit CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 15483 0.19356433285564212 No Hit CGCTTGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 14153 0.176937027895492 No Hit CGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 13390 0.167398205576248 No Hit CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 10135 0.12670506448956487 No Hit CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 9556 0.11946656105202584 No Hit CGCTTGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 9020 0.11276563213575481 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0011626611739052326 0.0 0.0 0.0 0.0 8 0.00420058230572213 0.0 0.0 0.0 0.0 9 0.012939293709590492 0.0 0.0 0.0 0.0 10 0.03718015409886195 0.0 0.0 0.0 0.0 11 0.04755659253263984 0.0 0.0 0.0 0.0 12 0.05658284379672132 0.0 0.0 0.0 0.0 13 0.06240865139930023 0.0 0.0 0.0 0.0 14 0.07263506903644518 0.0 0.0 0.0 0.0 15 0.08514930382224235 0.0 0.0 0.0 0.0 16 0.09681342076045292 0.0 0.0 0.0 0.0 17 0.10810248570708114 0.0 0.0 0.0 0.0 18 0.11871645706886116 0.0 0.0 0.0 0.0 19 0.13353101073636334 0.0 0.0 0.0 0.0 20 0.1461827645857407 0.0 0.0 0.0 0.0 21 0.15665921688394055 0.0 0.0 0.0 0.0 22 0.16642307039813395 0.0 0.0 0.0 0.0 23 0.17787465787444784 0.0 0.0 0.0 0.0 24 0.18850113096928062 0.0 0.0 0.0 0.0 25 0.19915260753021888 0.0 0.0 0.0 0.0 26 0.20974157542589342 0.0 0.0 0.0 0.0 27 0.2198054705333527 0.0 0.0 0.0 0.0 28 0.2319071481284093 0.0 0.0 0.0 0.0 29 0.24244610909187286 0.0 0.0 0.0 0.0 30 0.25308508391975837 0.0 0.0 0.0 0.0 31 0.26317398249332313 0.0 0.0 0.0 0.0 32 0.27381295732120864 0.0 0.0 0.0 0.0 33 0.2840893818905646 0.0 0.0 0.0 0.0 34 0.29501589657866323 0.0 0.0 0.0 0.0 35 0.3088303116019458 0.0 0.0 0.0 0.0 36 0.32249470582859546 0.0 0.0 0.0 0.0 37 0.3351339579449201 0.0 0.0 0.0 0.0 38 0.346535538489023 0.0 0.0 0.0 0.0 39 0.35687447172364267 0.0 0.0 0.0 0.0 40 0.368501083462695 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTTGG 826180 0.0 44.290127 1 GCTTGGG 822050 0.0 44.17382 2 CTTGGGG 768020 0.0 44.088776 3 TTGGGGG 381205 0.0 43.78269 4 TGGGGGG 175640 0.0 43.501476 5 TTGGGGA 304035 0.0 43.220646 4 TGGGGGA 91260 0.0 42.675762 5 TGGGGAG 100570 0.0 42.592422 5 TGGGGAC 56215 0.0 42.43227 5 TGGGGGT 67070 0.0 42.316986 5 TTGGGGC 54575 0.0 42.135406 4 TGGGGGC 55055 0.0 42.081375 5 TTGGGGT 41295 0.0 41.911854 4 TGGGGAT 106195 0.0 41.025093 5 TGGGGAA 51590 0.0 40.99787 5 CTTGGGA 31760 0.0 40.53243 3 TTGGGTA 7420 0.0 40.296497 4 TGGGGTA 11640 0.0 39.281788 5 TGGGGCA 20370 0.0 39.08984 5 CTTGGGT 18710 0.0 38.956173 3 >>END_MODULE