##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527827_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4279473 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35502525661454 33.0 31.0 34.0 31.0 34.0 2 32.466827340656195 34.0 31.0 34.0 31.0 34.0 3 32.868683597256016 34.0 31.0 34.0 31.0 34.0 4 36.341993278144294 37.0 37.0 37.0 35.0 37.0 5 36.34988209996885 37.0 37.0 37.0 35.0 37.0 6 36.317593544812645 37.0 37.0 37.0 35.0 37.0 7 36.44092321648016 37.0 37.0 37.0 35.0 37.0 8 36.61005665884561 37.0 37.0 37.0 35.0 37.0 9 38.70457554002561 39.0 39.0 39.0 39.0 39.0 10 38.10752468820343 39.0 38.0 39.0 37.0 39.0 11 37.78032902649462 39.0 38.0 39.0 35.0 39.0 12 37.07898028565667 39.0 35.0 39.0 34.0 39.0 13 36.932791023567624 39.0 35.0 39.0 33.0 39.0 14 37.65687317106569 40.0 36.0 40.0 33.0 40.0 15 37.70935907295127 40.0 36.0 40.0 33.0 40.0 16 37.736136201817374 40.0 36.0 40.0 33.0 40.0 17 37.54940900433301 40.0 36.0 40.0 33.0 40.0 18 37.55321040698235 40.0 36.0 40.0 33.0 40.0 19 37.539154003308354 40.0 36.0 40.0 33.0 40.0 20 37.53731195406537 40.0 36.0 40.0 33.0 40.0 21 37.52555022546 40.0 36.0 40.0 33.0 40.0 22 37.529126133054234 40.0 36.0 40.0 33.0 40.0 23 37.52561284999344 40.0 36.0 40.0 33.0 40.0 24 37.49716916078218 40.0 35.0 40.0 33.0 40.0 25 37.46355053531124 40.0 35.0 40.0 33.0 40.0 26 37.31926781638767 40.0 35.0 40.0 33.0 40.0 27 37.24404126395937 40.0 35.0 40.0 33.0 40.0 28 37.090760708152615 39.0 35.0 40.0 33.0 40.0 29 37.01092517700194 39.0 35.0 40.0 32.0 40.0 30 36.841827486702215 39.0 35.0 40.0 32.0 40.0 31 36.7437957898087 39.0 35.0 40.0 31.0 40.0 32 36.655611333451574 39.0 35.0 40.0 31.0 40.0 33 36.54538771479572 39.0 35.0 40.0 31.0 40.0 34 36.11007149712126 39.0 35.0 40.0 30.0 40.0 35 36.00901466138471 38.0 35.0 40.0 30.0 40.0 36 36.12933041054354 38.0 35.0 40.0 30.0 40.0 37 36.11515156188624 38.0 35.0 40.0 30.0 40.0 38 36.05147713281519 38.0 35.0 40.0 30.0 40.0 39 35.943974643606815 38.0 35.0 40.0 30.0 40.0 40 35.71243935877151 38.0 34.0 40.0 30.0 40.0 41 35.59423672026906 38.0 34.0 40.0 30.0 40.0 42 35.492290289014555 37.0 34.0 40.0 29.0 40.0 43 35.3492708097469 37.0 34.0 40.0 29.0 40.0 44 35.24483318389905 37.0 34.0 40.0 29.0 40.0 45 35.06499258203054 36.0 34.0 40.0 28.0 40.0 46 34.87042867194162 36.0 34.0 40.0 27.0 40.0 47 34.70687769265047 36.0 33.0 40.0 27.0 40.0 48 34.53152011941657 35.0 33.0 40.0 26.0 40.0 49 34.86194865582748 35.0 34.0 40.0 28.0 40.0 50 34.92826149388021 35.0 34.0 40.0 29.0 40.0 51 34.93535909678598 35.0 34.0 40.0 29.0 40.0 52 34.48440847739897 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 7.0 15 30.0 16 120.0 17 306.0 18 684.0 19 1303.0 20 2417.0 21 4236.0 22 7138.0 23 10939.0 24 15928.0 25 22147.0 26 29673.0 27 38802.0 28 49844.0 29 63207.0 30 79348.0 31 99332.0 32 127953.0 33 180334.0 34 396835.0 35 382544.0 36 396365.0 37 619361.0 38 1190016.0 39 560602.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.55024836002003 0.3663768879953209 0.07040586539510824 0.012968886589540348 8 99.45554043687154 0.4323429543777937 0.07391096987876779 0.03820563887188913 9 98.54038102355126 0.7305338764843241 0.2793801947108908 0.44970490525352075 10 60.72313109581483 24.07420259457181 5.186947084372305 10.015719225241051 11 40.85147867506116 23.063610869843085 18.96446127829291 17.120449176802843 12 36.6120314347117 15.3066277085987 24.277895899798878 23.803444956890722 13 27.631930380212705 15.171447512345562 26.02717671077724 31.169445396664496 14 24.840254863157217 17.159869918562404 30.931098291775644 27.068776926504732 15 29.48068605643732 16.953956713829015 27.37545020146172 26.189907028271943 16 33.96329407849985 18.49445013439739 23.672097008206382 23.870158778896375 17 31.450928654065578 18.607548172403472 23.51130618185931 26.43021699167164 18 32.42595525196677 20.256676464602066 22.615448210562374 24.701920072868784 19 30.87777396889757 22.381073557421676 21.511013155124477 25.230139318556283 20 33.427223398768966 21.250023075271184 21.779457423846345 23.54329610211351 21 33.59780515030706 22.41364766175648 22.158335851166722 21.830211336769736 22 30.97876771275342 19.442604264590525 25.456615802927136 24.122012219728926 23 31.855557915659244 20.174727121774104 24.276774266364107 23.692940696202548 24 33.67031407839236 19.753647236470474 22.028646985271315 24.547391699865848 25 29.594064502802098 19.694200664427605 21.59469168283104 29.11704314993926 26 27.20622375699064 19.19972389123614 24.44728591581253 29.146766435960693 27 25.216749819428703 17.862760204352266 23.977414976096355 32.943075000122676 28 27.32049016315794 23.17152135321335 21.440373616097123 28.06761486753159 29 31.932530010120402 21.616867310530992 20.961973588804042 25.488629090544563 30 30.13312620502571 19.537218718286105 24.378211990121212 25.951443086566968 31 34.2064314928497 19.323687753141567 21.776746809712318 24.69313394429641 32 36.10295005950499 19.49462001512803 21.131550543723492 23.270879381643486 33 36.443389174321226 19.122751796774974 21.64060855156698 22.793250477336812 34 31.164421413571255 21.031491494396622 26.478540698819693 21.325546393212434 35 28.16323411784582 25.30725161719679 25.77417826914669 20.7553359958107 36 27.90584261192909 27.743743213241444 21.93896304521608 22.41145112961339 37 31.38631789475013 26.09101634710629 19.79668991952981 22.725975838613774 38 31.332806632966253 26.020330073352486 20.332877436076828 22.31398585760443 39 32.64862285613205 23.043398100653985 19.697004748014535 24.61097429519943 40 29.382473028805183 21.924218239021485 20.035691310588945 28.657617421584387 41 26.88057618309544 24.385385770631103 20.759775794823334 27.97426225145012 42 25.07112441181426 22.302442380171577 21.179336801517383 31.447096406496783 43 24.938351053973236 20.372999198733115 23.138433166887605 31.550216580406044 44 25.91323744769508 19.085106974620473 22.94579262446568 32.05586295321877 45 30.17415929484775 19.67954932768591 22.222432528491243 27.923858848975097 46 27.287542181011542 24.255883843641495 21.657292848909197 26.799281126437762 47 26.141139341222626 22.158312483803495 23.01872216508902 28.681826009884865 48 27.597650458362516 20.499907348404815 26.252064214448833 25.650377978783833 49 30.12634966969064 19.502868694346244 24.64263707236849 25.72814456359463 50 26.67835502175151 20.41008320417023 24.032188075494343 28.879373698583915 51 24.999246402536013 20.830952783204847 26.528196345671535 27.641604468587605 52 24.77438226622764 20.54005247842433 25.088790138411905 29.596775116936126 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 48.5 6 97.0 7 65.5 8 34.0 9 158.0 10 282.0 11 894.0 12 1506.0 13 4437.5 14 8758.0 15 10147.0 16 9214.5 17 8282.0 18 7449.0 19 6616.0 20 7153.5 21 7691.0 22 7884.5 23 8078.0 24 8494.0 25 8910.0 26 10456.5 27 12003.0 28 14991.0 29 17979.0 30 19339.5 31 20700.0 32 22136.5 33 23573.0 34 29693.5 35 35814.0 36 39090.5 37 42367.0 38 47405.5 39 60506.0 40 68568.0 41 72404.0 42 76240.0 43 82132.5 44 88025.0 45 93145.5 46 98266.0 47 111710.5 48 125155.0 49 134331.0 50 143507.0 51 155789.5 52 168072.0 53 187748.5 54 207425.0 55 226115.5 56 244806.0 57 279166.5 58 313527.0 59 355941.5 60 398356.0 61 429188.5 62 460021.0 63 488251.5 64 424841.0 65 333200.0 66 295524.5 67 257849.0 68 210240.5 69 162632.0 70 142002.0 71 121372.0 72 102369.5 73 83367.0 74 80589.5 75 77812.0 76 61050.0 77 44288.0 78 30365.0 79 16442.0 80 11194.0 81 5946.0 82 4526.5 83 3107.0 84 1889.5 85 672.0 86 459.0 87 246.0 88 164.0 89 58.5 90 35.0 91 33.5 92 32.0 93 40.5 94 49.0 95 24.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 4279473.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.541456743813016 #Duplication Level Percentage of deduplicated Percentage of total 1 68.00609872653658 5.1286505186165305 2 9.896948270356974 1.4927481455330431 3 4.248973937440118 0.9613035946438055 4 2.222846866130007 0.6705401395615906 5 1.2550368078833771 0.47324028992728273 6 0.7553077384918897 0.3417672382862291 7 0.5462235952937581 0.2883525131450532 8 0.39711565661944787 0.23958644373491753 9 0.3295307527703503 0.22366277259963643 >10 5.292975191301197 11.224653311173556 >50 4.180938251434868 22.66874386728847 >100 2.702429343691396 35.3607442630386 >500 0.1021302887411046 5.145944103169994 >1k 0.05725485883971014 8.25330265777649 >5k 0.003404342958036819 1.7906475759221023 >10k+ 0.002785371511121034 5.736112565582714 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GACACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 77764 1.81713963378201 No Hit GACACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 47542 1.1109311824142831 No Hit GACACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 29208 0.6825139450581883 No Hit GACACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 23155 0.541071295460913 No Hit GACACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 18652 0.4358480588614533 No Hit GACACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 14387 0.33618625470939995 No Hit GACACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 12534 0.2928865306545923 No Hit GACACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 11283 0.26365395926087165 No Hit GACACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 11241 0.26267253000544694 No Hit GACACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 9346 0.21839137669521458 No Hit GACACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8275 0.19336493068188537 No Hit GACACTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 7424 0.1734793045779235 No Hit GACACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 7294 0.17044154735875186 No Hit GACACTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 7027 0.16420246137783787 No Hit GACACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6731 0.15728572186341636 No Hit GACACTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 6702 0.15660806832990884 No Hit GACACTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 6551 0.1530795964830249 No Hit GACACTGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 6345 0.1482659196587991 No Hit GACACTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 5556 0.12982907007474986 No Hit GACACTGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 5470 0.1278194768374517 No Hit GACACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 4620 0.10795721809671426 No Hit GACACTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 4553 0.10639160476067963 No Hit GACACTGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTCAATGGCTG 4451 0.10400813371179114 No Hit GACACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 4430 0.10351741908407881 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.009089904294290442 0.0 0.0 0.0 0.0 8 0.011683681612198512 0.0 0.0 0.0 0.0 9 0.014487765199126154 0.0 0.0 0.0 0.0 10 0.03135900144714081 0.0 0.0 0.0 0.0 11 0.04505227629663746 0.0 0.0 0.0 0.0 12 0.05271677143423968 0.0 0.0 0.0 0.0 13 0.05771738716426065 0.0 0.0 0.0 0.0 14 0.06636331155728754 0.0 0.0 0.0 0.0 15 0.07521954221933401 0.0 0.0 0.0 0.0 16 0.08821179617209876 0.0 0.0 0.0 0.0 17 0.09996557987397046 0.0 0.0 0.0 0.0 18 0.11050426068817353 0.0 0.0 0.0 0.0 19 0.12653427186010988 0.0 0.0 0.0 0.0026405120443568635 20 0.13856846392067435 0.0 0.0 0.0 0.0026405120443568635 21 0.14873326692328706 0.0 0.0 0.0 0.0026872467708056575 22 0.15728572186341636 0.0 0.0 0.0 0.0026872467708056575 23 0.1688058319330441 0.0 0.0 0.0 0.0026872467708056575 24 0.18226543315029678 0.0 0.0 0.0 0.0026872467708056575 25 0.19238350142646068 0.0 0.0 0.0 0.0026872467708056575 26 0.20864718623064102 0.0 0.0 0.0 0.0026872467708056575 27 0.22098515401312263 0.0 0.0 0.0 0.0026872467708056575 28 0.24383843524658294 0.0 0.0 0.0 0.0026872467708056575 29 0.25519497377363987 0.0 0.0 0.0 0.0026872467708056575 30 0.26783671727803865 0.0 0.0 0.0 0.0026872467708056575 31 0.27737060147359266 0.0 0.0 0.0 0.0026872467708056575 32 0.2897786713457475 0.0 0.0 0.0 0.0026872467708056575 33 0.2996630659896674 0.0 0.0 0.0 0.0026872467708056575 34 0.31214123795149545 0.0 0.0 0.0 0.0026872467708056575 35 0.33396635520308227 0.0 0.0 0.0 0.0026872467708056575 36 0.35037024418660895 0.0 0.0 0.0 0.0026872467708056575 37 0.3649982135650815 0.0 0.0 0.0 0.0026872467708056575 38 0.37633138472891403 0.0 0.0 0.0 0.0026872467708056575 39 0.38743088226050265 0.0 0.0 0.0 0.0026872467708056575 40 0.3994183395946183 0.0 0.0 0.0 0.0026872467708056575 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATACG 25 3.4187276E-5 46.0 11 ACTGGGA 106725 0.0 43.575546 4 ACACTGG 447615 0.0 43.544384 2 CACTGGG 442395 0.0 43.44834 3 GACACTG 451565 0.0 43.39575 1 ACTGGGG 271695 0.0 43.246216 4 ACTGGGC 43855 0.0 43.220383 4 CTGGGGG 124315 0.0 42.81961 5 TGGGGGG 67705 0.0 42.27339 6 CTGGGAT 31800 0.0 42.217297 5 CACTAGG 1640 0.0 42.213413 3 CTGGGGC 47560 0.0 42.10702 5 CTGGGGA 67285 0.0 42.058704 5 ACTGGGT 22140 0.0 41.803074 4 TGGGATT 10715 0.0 41.621094 6 CTGGGAC 18960 0.0 41.58439 5 CTGGGGT 38475 0.0 41.43288 5 TGGGGCT 26660 0.0 41.298203 6 CTGGGAG 39430 0.0 41.19351 5 TGGGGGT 18155 0.0 40.945194 6 >>END_MODULE