##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527824_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2966322 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.159660009938236 33.0 31.0 34.0 31.0 34.0 2 32.59578326290942 34.0 31.0 34.0 31.0 34.0 3 33.00939850764684 34.0 31.0 34.0 31.0 34.0 4 35.21989386182619 35.0 35.0 37.0 33.0 37.0 5 35.8646927069954 37.0 35.0 37.0 35.0 37.0 6 36.19449270847871 37.0 37.0 37.0 35.0 37.0 7 36.60464474187226 37.0 37.0 37.0 35.0 37.0 8 36.661395155347265 37.0 37.0 37.0 35.0 37.0 9 38.591998778285024 39.0 39.0 39.0 37.0 39.0 10 37.980286024241465 39.0 38.0 39.0 35.0 39.0 11 36.79392156347153 39.0 35.0 39.0 33.0 39.0 12 36.62296574680699 39.0 35.0 39.0 33.0 39.0 13 36.51254145706366 39.0 35.0 39.0 33.0 39.0 14 37.19297635253354 40.0 35.0 40.0 33.0 40.0 15 37.282885674582865 40.0 35.0 40.0 33.0 40.0 16 37.322991907149664 40.0 35.0 40.0 33.0 40.0 17 37.0976825846958 40.0 35.0 40.0 32.0 40.0 18 37.095155886650204 40.0 35.0 40.0 32.0 40.0 19 37.10876331025425 40.0 35.0 40.0 32.0 40.0 20 37.09624511432002 39.0 35.0 40.0 32.0 40.0 21 37.10695029062927 39.0 35.0 40.0 33.0 40.0 22 37.14896595851698 39.0 35.0 40.0 33.0 40.0 23 37.12650413542427 39.0 35.0 40.0 33.0 40.0 24 37.105313920740905 39.0 35.0 40.0 33.0 40.0 25 37.05591773246465 39.0 35.0 40.0 33.0 40.0 26 36.920021157514256 39.0 35.0 40.0 33.0 40.0 27 36.8376204606243 39.0 35.0 40.0 33.0 40.0 28 36.69478364115561 39.0 35.0 40.0 32.0 40.0 29 36.62346602964884 38.0 35.0 40.0 32.0 40.0 30 36.422162192776106 38.0 35.0 40.0 31.0 40.0 31 36.31220615968192 38.0 35.0 40.0 31.0 40.0 32 36.22783905455982 38.0 35.0 40.0 31.0 40.0 33 36.1202532968437 38.0 35.0 40.0 31.0 40.0 34 35.58069993749836 38.0 34.0 40.0 27.0 40.0 35 35.54073832847546 38.0 34.0 40.0 29.0 40.0 36 35.752440901560924 38.0 34.0 40.0 30.0 40.0 37 35.73409360143639 38.0 34.0 40.0 30.0 40.0 38 35.662610465081 38.0 34.0 40.0 30.0 40.0 39 35.50324172493748 37.0 34.0 40.0 30.0 40.0 40 35.32202808730812 37.0 34.0 40.0 29.0 40.0 41 35.21277797892474 37.0 34.0 40.0 29.0 40.0 42 35.13880927289755 37.0 34.0 40.0 29.0 40.0 43 35.02133820940545 36.0 34.0 40.0 29.0 40.0 44 34.91688663604288 36.0 34.0 40.0 28.0 40.0 45 34.766991580819614 36.0 34.0 40.0 27.0 40.0 46 34.53271020475862 35.0 33.0 40.0 26.0 40.0 47 34.37385084963804 35.0 33.0 40.0 26.0 40.0 48 34.22400467649837 35.0 33.0 39.0 25.0 40.0 49 34.57644348792882 35.0 34.0 40.0 27.0 40.0 50 34.671794228677804 35.0 34.0 40.0 28.0 40.0 51 34.69330672799514 35.0 34.0 40.0 28.0 40.0 52 34.24928750149174 35.0 34.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 2.0 14 14.0 15 56.0 16 126.0 17 366.0 18 794.0 19 1632.0 20 2723.0 21 4217.0 22 6668.0 23 9999.0 24 13921.0 25 18993.0 26 25348.0 27 32676.0 28 40842.0 29 49197.0 30 60140.0 31 76733.0 32 102017.0 33 156279.0 34 371540.0 35 246784.0 36 251264.0 37 388095.0 38 770300.0 39 335594.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.78401603062647 1.0444247118148333 0.12405935700844345 0.0474999005502437 8 98.62088471851673 1.177485114562748 0.1172158653039016 0.08441430161661478 9 93.3028174284518 3.5427374371359552 1.94719251652383 1.2072526178884153 10 52.36417354555574 33.10355382861335 5.968030443087432 8.56424218274348 11 38.076715879125736 22.013388971258006 21.604026804911943 18.30586834470432 12 35.907598703040335 16.69916482431779 25.221806668325286 22.171429804316592 13 25.90376230227197 17.20271770900125 27.54185149151036 29.351668497216416 14 23.70976583122129 19.024569820808395 32.71307026007291 24.552594087897404 15 29.38005381748846 19.06239443998325 28.657846316077624 22.899705426450666 16 35.19705547813083 20.575042089159574 23.983033534457824 20.244868898251774 17 32.01820301369844 21.236028994829287 25.137695772744834 21.608072218727433 18 32.4523770514462 21.171032679527038 23.61678873702855 22.75980153199821 19 28.949284669702074 25.740428719471453 22.918145771092956 22.392140839733514 20 31.8439131018143 24.39333963069417 22.592557382509384 21.170189884982143 21 30.47393371319769 25.29937747823736 23.606607778926225 20.620081029638722 22 28.71653852818406 21.98139649033382 27.594711565366133 21.707353416115986 23 31.52038113192027 21.35331228369678 25.448113859520312 21.67819272486264 24 33.85620306898577 20.819857048560472 23.253240882142936 22.070699000310825 25 29.72613896940386 21.82692910614559 20.741477155885303 27.705454768565247 26 26.548634976243306 21.331736743347484 25.687433798488495 26.432194481920707 27 25.065249153665718 20.800540197591495 23.844983788004136 30.28922686073865 28 25.661846556105505 26.172917168129423 21.55565039803501 26.609585877730062 29 31.722651822694907 24.344727241344668 20.552927160301547 23.37969377565888 30 29.27837908359241 21.00179953491226 25.521470696707908 24.198350684787425 31 32.82893765410498 21.444468941672547 22.772679432644196 22.95391397157827 32 35.90729529700417 21.029948872711728 22.318952561454893 20.74380326882921 33 35.90513774296924 20.583571169953903 21.888925072868016 21.62236601420884 34 28.639237412526352 22.49068037792256 28.46373387649756 20.406348333053526 35 25.74474382754131 28.581961095255338 26.50339376507338 19.169901312129973 36 26.358669085824125 30.623917430407083 22.392511669333267 20.62490181443552 37 31.16000218452346 27.664933206846726 20.597055882672212 20.5780087259576 38 29.782572492129983 28.509817882212385 20.552724889610772 21.15488473604686 39 31.163440786266627 24.75189814187401 21.186978352316437 22.89768271954292 40 28.376184379173942 23.206786046828363 20.494403507104085 27.922626066893613 41 23.917868660246594 27.133062425454824 21.74686362438063 27.202205289917952 42 23.50577583957507 23.973459388427823 21.971957191431006 30.548807580566102 43 24.687137809044334 21.7766311277063 22.840102996235743 30.69612806701363 44 25.41858233866721 21.16112141567908 22.364160060843023 31.056136184810683 45 29.370412247894865 22.11803034195209 21.85045992983904 26.661097480314005 46 26.914711214763603 27.074606195820955 21.23521991206619 24.775462677349257 47 24.339232220911956 24.007474576259757 23.65002855387918 28.0032646489491 48 25.417368714522564 22.219974770102503 27.02808393694279 25.334572578432144 49 29.298134187724735 21.6195005127562 24.676417462433275 24.405947837085794 50 25.427650807970277 21.730243715955314 24.589441065400184 28.252664410674228 51 23.416169923561906 22.006073514608325 27.575293579051767 27.002462982778 52 23.373726790281026 21.955606977260057 26.211112616904032 28.459553615554885 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 7.0 6 14.0 7 53.5 8 93.0 9 464.0 10 835.0 11 2019.5 12 3204.0 13 3718.5 14 5144.5 15 6056.0 16 6031.5 17 6007.0 18 5813.0 19 5619.0 20 6216.5 21 6814.0 22 6794.5 23 6775.0 24 8163.0 25 9551.0 26 11672.5 27 13794.0 28 16255.5 29 18717.0 30 21529.5 31 24342.0 32 29886.5 33 35431.0 34 38661.0 35 41891.0 36 48148.5 37 54406.0 38 59339.0 39 65462.5 40 66653.0 41 72112.0 42 77571.0 43 84088.0 44 90605.0 45 97182.0 46 103759.0 47 104927.0 48 106095.0 49 114491.5 50 122888.0 51 127883.5 52 132879.0 53 144387.0 54 155895.0 55 164459.0 56 173023.0 57 190100.5 58 207178.0 59 226040.0 60 244902.0 61 262063.5 62 279225.0 63 304162.0 64 253658.5 65 178218.0 66 156670.5 67 135123.0 68 111142.0 69 87161.0 70 73135.0 71 59109.0 72 50607.0 73 42105.0 74 39955.0 75 37805.0 76 28600.0 77 19395.0 78 14817.5 79 10240.0 80 6923.5 81 3607.0 82 2352.5 83 1098.0 84 694.5 85 291.0 86 256.0 87 221.0 88 165.5 89 59.5 90 9.0 91 6.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2966322.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.932041047718725 #Duplication Level Percentage of deduplicated Percentage of total 1 70.83085656891855 6.326641183186581 2 9.161035815385304 1.6365349588528584 3 4.050203476988694 1.0852975112422834 4 2.01640340970409 0.7204239209694773 5 1.1568411148551034 0.5166476161787239 6 0.7149986652094854 0.3831838456029134 7 0.5061361473701502 0.3164580190831076 8 0.36320745390774817 0.25953471097131303 9 0.28325310480895216 0.22770255231426015 >10 4.8667905014523996 12.251272902593861 >50 3.659190633606297 23.378263901870607 >100 2.2632922874335213 35.95176781014725 >500 0.08594780838354533 5.161128377656354 >1k 0.037696407185765494 5.577566180771206 >5k 0.0022617844311459295 1.3614701300896688 >10k+ 0.0018848203592882746 4.846106378469537 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 68746 2.317550151332189 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 34213 1.1533811905787708 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 19416 0.6545479553467224 No Hit TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10923 0.3682337925552249 No Hit TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10629 0.3583225287072678 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 8831 0.2977087450384685 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 7441 0.2508493683423445 No Hit TGGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6656 0.22438561963266293 No Hit TGGATGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 6397 0.21565426814755784 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 5924 0.19970859535815735 No Hit TGGATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5186 0.1748293003928771 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 4887 0.16474947763594108 No Hit TGGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4585 0.15456851953361772 No Hit TGGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4105 0.13838686427164684 No Hit TGGATGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 3161 0.10656294225643743 No Hit TGGATGGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 3065 0.10332661120404327 No Hit TGGATGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 3057 0.10305691694967709 No Hit TGGATGGGGGGGGCTGGAGAGATGGCTCAGAGGTTAGGAGCACTGACTGCTC 3004 0.10127019251450112 No Hit TGGATGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2971 0.10015770371524062 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.012507071046231664 0.0 0.0 0.0 0.0 8 0.023227417657287374 0.0 0.0 0.0 0.0 9 0.03822916055640622 0.0 0.0 0.0 0.0 10 0.07325570184221403 0.0 0.0 0.0 0.0 11 0.10127019251450112 0.0 0.0 0.0 0.0 12 0.11805865984879592 0.0 0.0 0.0 0.0 13 0.12810477082393618 0.0 0.0 0.0 0.0 14 0.1436121904499916 0.0 0.0 0.0 0.0 15 0.16019838709351175 0.0 0.0 0.0 0.0 16 0.1780656314452713 0.0 0.0 0.0 0.0 17 0.19539348728829845 0.0 0.0 0.0 0.0 18 0.2126876313495298 0.0 0.0 0.0 0.0 19 0.23419574813523278 0.0 0.0 0.0 0.0 20 0.2538160051403725 0.0 0.0 0.0 0.0 21 0.27417792134501917 0.0 0.0 0.0 0.0 22 0.2930228073688561 0.0 0.0 0.0 0.0 23 0.3137555531732563 0.0 0.0 0.0 0.0 24 0.3320947624701566 0.0 0.0 0.0 0.0 25 0.3506362424578316 0.0 0.0 0.0 0.0 26 0.3699530934268094 0.0 0.0 0.0 0.0 27 0.386168460470576 0.0 0.0 0.0 0.0 28 0.40612583529367347 0.0 0.0 0.0 0.0 29 0.4207904603748346 0.0 0.0 0.0 0.0 30 0.4358596268375449 0.0 0.0 0.0 0.0 31 0.4496140338102202 0.0 0.0 0.0 0.0 32 0.4645483531457475 0.0 0.0 0.0 0.0 33 0.47766223626430304 0.0 0.0 3.3711781795772674E-5 0.0 34 0.49027044265592207 0.0 0.0 3.3711781795772674E-5 0.0 35 0.5095535818431041 0.0 0.0 3.3711781795772674E-5 0.0 36 0.5294098213208142 0.0 0.0 3.3711781795772674E-5 0.0 37 0.5449509527286653 0.0 0.0 3.3711781795772674E-5 0.0 38 0.5595481542462349 0.0 0.0 3.3711781795772674E-5 0.0 39 0.5735722554732763 0.0 0.0 3.3711781795772674E-5 0.0 40 0.5896527753898599 0.0 0.0 3.3711781795772674E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAG 20 6.3130766E-4 46.0 24 CGCGATA 60 0.0 46.0 29 ACGCTTA 30 1.862405E-6 46.0 33 CGTAACG 20 6.3130766E-4 46.0 31 TAGTCGA 30 1.862405E-6 46.0 11 TGGATGG 305185 0.0 44.137753 1 ATGGGGG 149900 0.0 44.060574 4 GATGGGG 281775 0.0 44.02548 3 GGATGGG 302040 0.0 44.008705 2 ATGGGGA 94720 0.0 43.953022 4 TGGGGGG 69385 0.0 43.55365 5 ATGGGGT 14570 0.0 42.937546 4 TGGGGGA 32965 0.0 42.930077 5 TGGGGGT 21435 0.0 42.866806 5 TGGGGGC 29155 0.0 42.828674 5 TGGGGAC 16435 0.0 42.78126 5 TGGGGAG 31930 0.0 42.492012 5 ATGGGGC 24010 0.0 42.139526 4 TGGGGAT 30995 0.0 41.169224 5 TACGCGA 40 2.9126568E-7 40.25 10 >>END_MODULE