SRR1527823_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527823_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2998407
Sequences flagged as poor quality	0
Sequence length	52
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	65666	2.1900295723695953	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	32822	1.0946479247146903	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC	18985	0.6331695463624518	No Hit
TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	10531	0.35121983106362814	No Hit
TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	10396	0.34671744029412954	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC	8390	0.279815248563654	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT	7144	0.23825984931331873	No Hit
TGGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	6481	0.21614810797867	No Hit
TGGATGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC	6015	0.20060652206321558	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT	5740	0.19143498531053324	No Hit
TGGATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC	5022	0.16748893662534806	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC	4714	0.15721681546234384	No Hit
TGGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT	4472	0.14914586311998337	No Hit
TGGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG	3931	0.13110294899925196	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTAC	20	6.313086E-4	46.000004	46
CGATAAC	20	6.313086E-4	46.000004	41
TACGTTA	20	6.313086E-4	46.000004	32
TGGATGG	308630	0.0	44.142887	1
GGATGGG	305505	0.0	44.00645	2
GATGGGG	285430	0.0	43.983078	3
ATGGGGG	152640	0.0	43.93868	4
ATGGGGA	94215	0.0	43.822426	4
TGGGGGG	69925	0.0	43.473866	5
ATGGGGT	15295	0.0	43.263157	4
ATATCGT	80	0.0	43.125004	24
TGGGGAC	16800	0.0	43.015476	5
TGGGGGA	33140	0.0	42.932407	5
TGGGGGC	31540	0.0	42.73304	5
ATGGGGC	24850	0.0	42.529175	4
TGGGGAG	31775	0.0	42.4749	5
TGGGGGT	21135	0.0	42.408802	5
TGGGGAT	30310	0.0	41.067635	5
TGGGGCA	8210	0.0	40.36906	5
CGCGATA	40	2.912675E-7	40.250004	29