##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527823_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2998407 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10606832227913 33.0 31.0 34.0 31.0 34.0 2 32.55850289837237 34.0 31.0 34.0 31.0 34.0 3 32.99062168678235 34.0 31.0 34.0 31.0 34.0 4 35.17159444998627 35.0 35.0 37.0 33.0 37.0 5 35.86035518193494 37.0 35.0 37.0 35.0 37.0 6 36.09244475483148 37.0 36.0 37.0 35.0 37.0 7 36.55926597023019 37.0 37.0 37.0 35.0 37.0 8 36.63164773828236 37.0 37.0 37.0 35.0 37.0 9 38.54877273165384 39.0 39.0 39.0 37.0 39.0 10 37.89620855340853 39.0 38.0 39.0 35.0 39.0 11 36.756589415646374 39.0 35.0 39.0 33.0 39.0 12 36.5728098286857 39.0 35.0 39.0 33.0 39.0 13 36.311619469938535 39.0 35.0 39.0 33.0 39.0 14 37.114068570410886 40.0 35.0 40.0 33.0 40.0 15 37.22865641655719 40.0 35.0 40.0 33.0 40.0 16 37.29950203558089 40.0 35.0 40.0 33.0 40.0 17 37.10661361182788 40.0 35.0 40.0 32.0 40.0 18 37.12013712614732 40.0 35.0 40.0 32.0 40.0 19 37.09258416219012 40.0 35.0 40.0 32.0 40.0 20 37.09453253010682 39.0 35.0 40.0 32.0 40.0 21 37.15635635855973 40.0 35.0 40.0 33.0 40.0 22 37.0946529273711 39.0 35.0 40.0 33.0 40.0 23 37.09128947471107 39.0 35.0 40.0 33.0 40.0 24 37.11839286661217 39.0 35.0 40.0 33.0 40.0 25 37.036401662616186 39.0 35.0 40.0 33.0 40.0 26 36.852764484607995 39.0 35.0 40.0 33.0 40.0 27 36.77049413238429 39.0 35.0 40.0 32.0 40.0 28 36.64334995215793 38.0 35.0 40.0 32.0 40.0 29 36.572700437265524 38.0 35.0 40.0 32.0 40.0 30 36.3611954614567 38.0 35.0 40.0 31.0 40.0 31 36.27129305661306 38.0 35.0 40.0 31.0 40.0 32 36.19055952043868 38.0 35.0 40.0 31.0 40.0 33 35.942821638289935 38.0 35.0 40.0 30.0 40.0 34 35.50231506263159 38.0 34.0 40.0 27.0 40.0 35 35.53460387465744 38.0 34.0 40.0 29.0 40.0 36 35.59910912694641 38.0 34.0 40.0 30.0 40.0 37 35.64574455702645 38.0 34.0 40.0 30.0 40.0 38 35.30861921013391 37.0 34.0 40.0 29.0 40.0 39 35.31224546901071 37.0 34.0 40.0 29.0 40.0 40 35.203474044717744 37.0 34.0 40.0 29.0 40.0 41 34.90489049685383 37.0 34.0 40.0 27.0 40.0 42 34.97312072710609 36.0 34.0 40.0 28.0 40.0 43 34.97166528760105 36.0 34.0 40.0 28.0 40.0 44 34.865695350897994 36.0 34.0 40.0 28.0 40.0 45 34.70903383029722 36.0 34.0 40.0 27.0 40.0 46 34.30516737721063 35.0 33.0 40.0 25.0 40.0 47 34.05799246066328 35.0 33.0 39.0 24.0 40.0 48 34.07908899625701 35.0 33.0 39.0 24.0 40.0 49 34.07145060693895 35.0 33.0 39.0 26.0 40.0 50 33.95394254349059 35.0 33.0 39.0 26.0 40.0 51 34.30388536312782 35.0 34.0 39.0 27.0 40.0 52 34.0495533128091 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 12.0 15 50.0 16 141.0 17 433.0 18 871.0 19 1620.0 20 2881.0 21 4751.0 22 7289.0 23 10417.0 24 14687.0 25 19683.0 26 26465.0 27 34333.0 28 42590.0 29 51673.0 30 63785.0 31 81406.0 32 109801.0 33 172281.0 34 372106.0 35 245856.0 36 267955.0 37 415617.0 38 761815.0 39 289880.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.7656445572599 1.0555605026268948 0.12726757908449385 0.051527361028706246 8 98.61753257646477 1.179059413882105 0.11552801204106047 0.08787999761206533 9 93.24381246441861 3.555221155767046 1.9835199157419257 1.2174464640724225 10 52.41463216968209 33.0474148439488 5.993515890271067 8.54443709609803 11 38.083188839940675 21.963095737169773 21.59363288572899 18.360082537160565 12 35.91617148705963 16.67785594150494 25.220158570867795 22.185814000567635 13 26.07291138261083 17.25202749326559 27.48939686973783 29.185664254385745 14 23.702752828418557 19.056018745954102 32.716372393741075 24.524856031886266 15 29.417454001408082 19.04104412776518 28.648078796507615 22.89342307431913 16 35.21373182493237 20.566020556915724 23.955420328194272 20.264827289957633 17 31.96547366651692 21.17330969411424 25.132678785768576 21.728537853600262 18 32.41057668288528 21.16760666580621 23.656728389441458 22.76508826186705 19 28.973318165279093 25.70424895619574 22.926907521227104 22.39552535729806 20 31.838206087432425 24.38378112110864 22.550040738298705 21.227972053160226 21 30.449702125161792 25.287594379282062 23.611237567148155 20.651465928407987 22 28.87276477142696 21.979837960623758 27.53088556690269 21.61651170104659 23 31.524172669020583 21.322255450977803 25.420998550230173 21.732573329771444 24 33.8766218195195 20.80438045935725 23.27682666162399 22.04217105949926 25 29.743560497290726 21.784967817911312 20.71489961169381 27.756572073104152 26 26.591119884658752 21.306013493164873 25.721191285906148 26.381675336270227 27 25.10559773906611 20.778766858535217 23.783062139329317 30.332573263069357 28 25.62290576296013 26.181469026719856 21.551043604153804 26.644581606166206 29 31.759164116145673 24.289631127462016 20.548711365735205 23.402493390657106 30 29.299691469503642 21.01129032849777 25.513514342782685 24.17550385921591 31 32.83757008304743 21.402731517102247 22.80057377133925 22.959124628511073 32 35.98420761424316 21.035903398037693 22.27923027127405 20.7006587164451 33 35.8060796949847 20.67004245921251 21.96042765375081 21.56345019205198 34 28.640908322319152 22.47460067962755 28.438634248119083 20.445856749934215 35 25.751940947309688 28.643309597396215 26.413558933126822 19.191190522167272 36 26.588751960624425 30.510367671900447 22.34076294512386 20.56011742235127 37 31.163147631392267 27.65391756355958 20.543075039512647 20.639859765535498 38 29.83497570543292 28.481790497420796 20.46933588402108 21.2138979131252 39 31.184892511256812 24.764650029165487 21.136290036676144 22.91416742290156 40 28.334912505206933 23.21039138449183 20.516761066793133 27.937935043508105 41 24.13178064218767 27.11623205255324 21.719199561633896 27.032787743625196 42 23.45999058833574 23.990972539751944 21.961394833990184 30.587642037922137 43 24.665263921809146 21.705192123684345 22.875113351856502 30.754430602650007 44 25.459418951463224 21.121215365359006 22.33639395852531 31.08297172465246 45 29.414218950262587 22.089129327672993 21.821453858665617 26.675197863398797 46 27.0372901343947 27.03408843429194 21.24698214752033 24.68163928379303 47 24.559174254862665 23.94164634754388 23.63775164612409 27.861427751469364 48 25.43807428411153 22.22836993110008 27.04272635436083 25.290829430427557 49 29.327139377676215 21.57485624866804 24.610868371105056 24.487136002550688 50 25.408525260246524 21.7310058307628 24.53419432385263 28.32627458513804 51 23.424571780949016 22.020159371292824 27.599188502428124 26.956080345330037 52 23.42713981123977 21.894492642259706 26.196376942823306 28.48199060367722 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 9.5 6 19.0 7 56.0 8 93.0 9 488.5 10 884.0 11 1941.0 12 2998.0 13 3574.5 14 5056.0 15 5961.0 16 5892.0 17 5823.0 18 5801.0 19 5779.0 20 6353.5 21 6928.0 22 6874.0 23 6820.0 24 8276.5 25 9733.0 26 11853.0 27 13973.0 28 16288.0 29 18603.0 30 21614.5 31 24626.0 32 30165.5 33 35705.0 34 39039.5 35 42374.0 36 48433.0 37 54492.0 38 59420.0 39 65845.5 40 67343.0 41 72858.5 42 78374.0 43 84979.5 44 91585.0 45 98231.5 46 104878.0 47 106024.5 48 107171.0 49 115857.0 50 124543.0 51 129501.0 52 134459.0 53 145683.5 54 156908.0 55 165820.0 56 174732.0 57 192530.0 58 210328.0 59 229216.0 60 248104.0 61 265889.0 62 283674.0 63 306664.5 64 255431.5 65 181208.0 66 159031.0 67 136854.0 68 112781.5 69 88709.0 70 74495.0 71 60281.0 72 51374.5 73 42468.0 74 40372.5 75 38277.0 76 29019.5 77 19762.0 78 15011.5 79 10261.0 80 7017.5 81 3774.0 82 2450.0 83 1126.0 84 708.5 85 291.0 86 258.0 87 225.0 88 156.5 89 49.0 90 10.0 91 6.5 92 3.0 93 4.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2998407.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.353764959139935 #Duplication Level Percentage of deduplicated Percentage of total 1 70.50401824915741 6.594780153775312 2 9.622065580424922 1.8000507972145017 3 4.008204194705538 1.1247539983654309 4 2.100778174199111 0.7860074109099847 5 1.1943281249985678 0.5585732282663451 6 0.7149727239686275 0.4012612087319146 7 0.4815026627378359 0.315270391411482 8 0.3427805564218161 0.2565031005866298 9 0.28490280207127966 0.23984224620976044 >10 5.00234632665893 13.271198319815653 >50 3.543915439829444 23.582692611420235 >100 2.083582056700762 34.69892958942852 >500 0.07897718505641103 5.013355745781352 >1k 0.03352805025979713 5.182358577235975 >5k 0.002235203350653142 1.3517438840799474 >10k+ 0.0018626694588776188 4.8226787367669814 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 65666 2.1900295723695953 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 32822 1.0946479247146903 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 18985 0.6331695463624518 No Hit TGGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10531 0.35121983106362814 No Hit TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10396 0.34671744029412954 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 8390 0.279815248563654 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 7144 0.23825984931331873 No Hit TGGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6481 0.21614810797867 No Hit TGGATGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 6015 0.20060652206321558 No Hit TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 5740 0.19143498531053324 No Hit TGGATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5022 0.16748893662534806 No Hit TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 4714 0.15721681546234384 No Hit TGGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4472 0.14914586311998337 No Hit TGGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3931 0.13110294899925196 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.01100584410321881 0.0 0.0 0.0 0.0 8 0.021177912138011953 0.0 0.0 0.0 0.0 9 0.034418276104611546 0.0 0.0 0.0 0.0 10 0.06900330742290824 0.0 0.0 0.0 0.0 11 0.09318281340725258 0.0 0.0 0.0 0.0 12 0.11052535563050647 0.0 0.0 0.0 0.0 13 0.1200637538532961 0.0 0.0 0.0 0.0 14 0.1350717230849581 0.0 0.0 0.0 0.0 15 0.15248096739368605 0.0 0.0 0.0 0.0 16 0.1702904242152583 0.0 0.0 0.0 0.0 17 0.18796647686588244 0.0 0.0 0.0 0.0 18 0.20434183884976256 0.0 0.0 0.0 0.0 19 0.22555310203051154 0.0 0.0 0.0 0.0 20 0.2456304297582016 0.0 0.0 0.0 0.0 21 0.2644070668191476 0.0 0.0 0.0 0.0 22 0.28208311946977177 0.0 0.0 0.0 0.0 23 0.30252730866756916 0.0 0.0 0.0 0.0 24 0.32200431762599274 0.0 0.0 0.0 0.0 25 0.34098106094336095 0.0 0.0 0.0 0.0 26 0.3593574854914626 0.0 0.0 0.0 0.0 27 0.37626646415913517 0.0 0.0 0.0 0.0 28 0.3964438450150363 0.0 0.0 0.0 0.0 29 0.41058468713553564 0.0 0.0 0.0 0.0 30 0.4250256886406682 0.0 0.0 0.0 0.0 31 0.43856621199190104 0.0 0.0 0.0 0.0 32 0.452240139514082 0.0 0.0 0.0 0.0 33 0.46421316385667455 0.0 0.0 0.0 0.0 34 0.4786541653618071 0.0 0.0 0.0 0.0 35 0.4954964419440056 0.0 0.0 0.0 0.0 36 0.513539356064737 0.0 0.0 0.0 0.0 37 0.5299814201340912 0.0 0.0 0.0 0.0 38 0.5443223685110127 0.0 0.0 0.0 0.0 39 0.5582631043750899 0.0 0.0 0.0 0.0 40 0.5718369787690597 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 20 6.313086E-4 46.000004 46 CGATAAC 20 6.313086E-4 46.000004 41 TACGTTA 20 6.313086E-4 46.000004 32 TGGATGG 308630 0.0 44.142887 1 GGATGGG 305505 0.0 44.00645 2 GATGGGG 285430 0.0 43.983078 3 ATGGGGG 152640 0.0 43.93868 4 ATGGGGA 94215 0.0 43.822426 4 TGGGGGG 69925 0.0 43.473866 5 ATGGGGT 15295 0.0 43.263157 4 ATATCGT 80 0.0 43.125004 24 TGGGGAC 16800 0.0 43.015476 5 TGGGGGA 33140 0.0 42.932407 5 TGGGGGC 31540 0.0 42.73304 5 ATGGGGC 24850 0.0 42.529175 4 TGGGGAG 31775 0.0 42.4749 5 TGGGGGT 21135 0.0 42.408802 5 TGGGGAT 30310 0.0 41.067635 5 TGGGGCA 8210 0.0 40.36906 5 CGCGATA 40 2.912675E-7 40.250004 29 >>END_MODULE