##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527820_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1222314 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00499789743061 33.0 31.0 34.0 31.0 34.0 2 32.410822423698 34.0 31.0 34.0 31.0 34.0 3 30.88437668226004 31.0 31.0 31.0 30.0 33.0 4 35.75566180212286 37.0 35.0 37.0 35.0 37.0 5 35.909767866522024 37.0 35.0 37.0 35.0 37.0 6 36.03575840577789 37.0 35.0 37.0 35.0 37.0 7 36.534871563280795 37.0 37.0 37.0 35.0 37.0 8 36.59807872608839 37.0 37.0 37.0 35.0 37.0 9 38.45593358171468 39.0 39.0 39.0 37.0 39.0 10 37.76315169424551 39.0 38.0 39.0 35.0 39.0 11 36.86647211763917 39.0 35.0 39.0 33.0 39.0 12 36.6728189319602 39.0 35.0 39.0 32.0 39.0 13 36.511897106635445 39.0 35.0 39.0 33.0 39.0 14 37.5224770394514 40.0 36.0 40.0 33.0 40.0 15 37.66255806609431 40.0 36.0 40.0 33.0 40.0 16 37.67285574737752 40.0 36.0 40.0 33.0 40.0 17 37.64902553680969 40.0 36.0 40.0 33.0 40.0 18 37.634510444942954 40.0 36.0 40.0 33.0 40.0 19 37.468395191415624 40.0 35.0 40.0 33.0 40.0 20 37.395107149226796 39.0 35.0 40.0 33.0 40.0 21 37.27714400718637 39.0 35.0 40.0 33.0 40.0 22 36.911423742180816 39.0 35.0 40.0 33.0 40.0 23 36.76738137663481 39.0 35.0 40.0 32.0 40.0 24 36.61577876061307 38.0 35.0 40.0 32.0 40.0 25 36.45075651591981 38.0 35.0 40.0 32.0 40.0 26 36.143539221509364 37.0 35.0 40.0 31.0 40.0 27 35.923744635175574 37.0 35.0 40.0 31.0 40.0 28 35.69592592410788 37.0 35.0 40.0 31.0 40.0 29 35.41826813731987 36.0 35.0 40.0 30.0 40.0 30 35.1415380990482 35.0 34.0 39.0 30.0 40.0 31 34.95589103945468 35.0 34.0 39.0 29.0 40.0 32 34.670354753361245 35.0 34.0 39.0 29.0 40.0 33 34.3454014271292 35.0 34.0 39.0 27.0 40.0 34 34.21355069155716 35.0 33.0 39.0 27.0 40.0 35 34.050271861403864 35.0 33.0 39.0 27.0 40.0 36 33.763834824766796 35.0 33.0 38.0 26.0 40.0 37 33.575789854325485 35.0 33.0 38.0 25.0 40.0 38 33.15920377251672 35.0 33.0 37.0 23.0 40.0 39 33.111275826015245 35.0 33.0 37.0 23.0 40.0 40 32.89766132106807 35.0 33.0 37.0 23.0 40.0 41 32.60255793519505 35.0 33.0 37.0 22.0 40.0 42 32.625542209285015 35.0 33.0 36.0 22.0 40.0 43 32.53346357809859 35.0 33.0 36.0 22.0 39.0 44 32.39091591849557 35.0 32.0 36.0 22.0 39.0 45 32.31311512426431 35.0 32.0 36.0 22.0 39.0 46 32.02019448357787 35.0 32.0 35.0 20.0 39.0 47 31.798465860654463 35.0 32.0 35.0 20.0 39.0 48 31.692882516276505 35.0 31.0 35.0 20.0 38.0 49 31.609438327631036 35.0 31.0 35.0 20.0 38.0 50 31.501542156925307 35.0 31.0 35.0 20.0 37.0 51 31.74468589904067 35.0 32.0 35.0 20.0 37.0 52 31.49331595645636 35.0 32.0 35.0 20.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 3.0 14 11.0 15 18.0 16 64.0 17 222.0 18 499.0 19 1033.0 20 1981.0 21 3296.0 22 5238.0 23 7804.0 24 10996.0 25 14783.0 26 19168.0 27 23227.0 28 25003.0 29 25686.0 30 29255.0 31 36502.0 32 49152.0 33 74623.0 34 140355.0 35 176437.0 36 224970.0 37 167666.0 38 162225.0 39 22095.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.10751247224526 0.6868120630214495 0.15928803891635046 0.046387425816934114 8 98.14180317005287 1.4252475223224146 0.26057134255191383 0.17237796507280453 9 91.631282960025 4.719981935901904 2.394392930130883 1.2543421739422114 10 47.772421816325426 35.17287701850752 7.4877650096456385 9.566936155521413 11 31.046686857877763 27.492608282323527 22.569732490996586 18.890972368802124 12 29.251076237366174 22.168689878378224 26.219203903415977 22.361029980839618 13 22.665861636208046 20.56468305198173 28.505686754794596 28.263768557015627 14 22.47843025605532 23.437103722938623 28.44007349993537 25.644392521070692 15 25.485268106231295 23.543868433152202 26.987828004915265 23.983035455701234 16 27.877124863169367 23.03581567420483 25.56822551324782 23.51883394937798 17 29.95850493408404 23.759524966579782 22.28829907863282 23.993671020703356 18 28.15594029030184 23.828656139093553 22.687296390289237 25.328107180315367 19 27.127153906443024 23.29311453521763 23.57945666989006 26.000274888449287 20 27.864443997205303 24.807128119288496 23.309967815144063 24.01846006836214 21 29.954823392352537 22.763872458304494 24.707071996230102 22.574232153112867 22 28.440891620320148 22.337795361911912 24.935000335429358 24.286312682338583 23 29.55288084731092 24.19165615381972 22.78890694207871 23.466556056790644 24 27.16601462472 24.59253514236113 23.424913729205425 24.81653650371345 25 28.798082980314387 24.489288349802095 21.45937950477537 25.253249165108148 26 28.63666782839761 24.071310645218823 21.236932572154128 26.05508895422944 27 29.249930868827484 23.758870470271958 21.46698802435381 25.524210636546744 28 30.82890321144976 24.900230219076278 20.46299068815378 23.807875881320186 29 30.14724530685241 25.124722452659466 21.106115122628065 23.621917117860058 30 28.306310817024105 24.011178796937614 22.07305160539763 25.609458780640654 31 28.778448091079706 25.185263361133064 21.101942708665693 24.934345839121537 32 29.693106681261934 25.15973800512798 21.879075262166676 23.26808005144341 33 30.243210827986918 24.853597357143908 21.72453232148204 23.178659493387133 34 28.32169148025794 25.6144493149878 23.79028629304745 22.27357291170681 35 28.392295269464313 25.891710313389193 23.300395806642154 22.41559861050434 36 28.95949813223116 26.023345883300035 21.75553908406514 23.261616900403663 37 29.171882184119628 26.665079513120197 22.204605363269994 21.95843293949018 38 30.74414593958672 24.775466860397575 21.610813587997846 22.86957361201786 39 28.20772731065831 24.854497289567163 21.93920711044789 24.998568289326638 40 27.796458193230215 24.987278228016695 22.88209085390497 24.334172724848116 41 28.497423738908335 24.569545959548854 22.81549585458401 24.117534446958803 42 27.746471037720262 23.597128070201272 22.774180775152704 25.882220116925765 43 26.997236389340216 23.455838679750048 24.069674404449266 25.477250526460466 44 27.002063299610413 23.279615548868783 24.096508753069998 25.621812398450807 45 27.208066012497607 22.96881161469148 23.365109129078128 26.458013243732786 46 27.603299970384043 24.10509901711017 23.792331594009394 24.499269418496393 47 27.876388554823066 23.62273523824484 23.929203134382817 24.57167307254928 48 29.19274425393148 23.257362674402813 23.350301150113637 24.19959192155207 49 26.89055349116512 23.467619613290857 24.30594757157326 25.33587932397076 50 25.26396654214874 24.415575703133566 24.37908753397245 25.94137022074524 51 26.063270158077223 24.091681842799805 24.196810312243827 25.64823768687915 52 27.046814484657787 23.995143637395955 23.438985399823615 25.519056478122643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 7.5 8 15.0 9 48.0 10 81.0 11 753.0 12 1425.0 13 2250.0 14 2477.5 15 1880.0 16 2321.0 17 2762.0 18 2887.5 19 3013.0 20 2983.0 21 2953.0 22 3125.0 23 3297.0 24 4001.0 25 4705.0 26 5774.0 27 6843.0 28 8057.0 29 9271.0 30 10187.0 31 11103.0 32 15668.5 33 20234.0 34 18828.5 35 17423.0 36 19305.0 37 21187.0 38 21980.5 39 25457.0 40 28140.0 41 28185.5 42 28231.0 43 29743.5 44 31256.0 45 33500.5 46 35745.0 47 38749.0 48 41753.0 49 41491.0 50 41229.0 51 46270.5 52 51312.0 53 52141.5 54 52971.0 55 58479.5 56 63988.0 57 66642.5 58 69297.0 59 75715.5 60 82134.0 61 94081.0 62 106028.0 63 101317.5 64 95834.5 65 95062.0 66 85759.5 67 76457.0 68 70050.0 69 63643.0 70 51754.0 71 39865.0 72 33346.0 73 26827.0 74 24599.5 75 22372.0 76 21519.5 77 20667.0 78 15615.0 79 10563.0 80 6853.5 81 3144.0 82 2461.0 83 1778.0 84 1320.0 85 862.0 86 538.0 87 214.0 88 144.5 89 54.5 90 34.0 91 25.5 92 17.0 93 8.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1222314.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.07693363058004 #Duplication Level Percentage of deduplicated Percentage of total 1 77.12399690916567 10.856693858153852 2 8.329473324778078 2.3450688634117576 3 3.304120331042567 1.3953564782260908 4 1.7375467292793427 0.9783731995238693 5 0.9294054424060396 0.6541589364324849 6 0.5304912669132081 0.44806142135637317 7 0.37309726135588567 0.36764457701005837 8 0.26986271759635605 0.3039071651977495 9 0.21820498088239684 0.27644913303691376 >10 3.215521750373825 12.309356457224562 >50 2.335945989650835 23.69242022195421 >100 1.5691345516670259 38.049249581316985 >500 0.04995710310255586 4.6205595427657755 >1k 0.0126397489777551 3.2239023472006045 >5k 6.018928084645285E-4 0.47879821718871524 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGTGCGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 5651 0.46231982943826216 No Hit TGTGCGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3373 0.27595200578574736 No Hit TGTGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3349 0.27398851686227926 No Hit TGTGCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 2772 0.22678297066056674 No Hit TGTGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2555 0.20902975831087592 No Hit TGTGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2504 0.20485734434850617 No Hit TGTGCGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2197 0.17974104853580997 No Hit TGTGCGGGGATATTATTTGATCTTATCTTGGATCCTTTTGAAAAGTTAAGAA 2123 0.17368695768844994 No Hit TGTGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2015 0.16485125753284344 No Hit TGTGCGGGGATTATTTGATCTTATCTTGGATCCTTTTGAAAAGTTAAGAATA 1968 0.16100609172438504 No Hit TGTGCGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1906 0.1559337453387591 No Hit TGTGCGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1762 0.14415281179795045 No Hit TGTGCGGGGTATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1385 0.11330967329180554 No Hit TGTGCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTGTGCGGGGAAG 1224 0.10013793509687365 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.015544287310789207 0.0 0.0 0.0 0.0 8 0.022825558735316786 0.0 0.0 0.0 0.0 9 0.03329749966048004 0.0 0.0 0.0 0.0 10 0.07207640589897522 0.0 0.0 0.0 0.0 11 0.09784719801949417 0.0 0.0 0.0 0.0 12 0.12689047167912665 0.0 0.0 0.0 0.0 13 0.14767072945249748 0.0 0.0 0.0 0.0 14 0.18514064307534725 0.0 0.0 0.0 0.0 15 0.22220149650580784 0.0 0.0 0.0 0.0 16 0.251899266473263 0.0 0.0 0.0 0.0 17 0.2832332772102749 0.0 0.0 0.0 0.0 18 0.31972144637139066 0.0 0.0 0.0 0.0 19 0.3588276007637972 0.0 0.0 0.0 0.0 20 0.40030630427206104 0.0 0.0 0.0 0.0 21 0.4464482939735616 0.0 0.0 0.0 0.0 22 0.4901359225207271 0.0 0.0 0.0 0.0 23 0.5402867021076417 0.0 0.0 0.0 0.0 24 0.587083188116965 0.0 0.0 0.0 0.0 25 0.630525380548697 0.0 0.0 0.0 0.0 26 0.6729858285186948 0.0 0.0 0.0 0.0 27 0.7035835309094063 0.0 0.0 0.0 0.0 28 0.74506223441767 0.0 0.0 0.0 0.0 29 0.7682968533453761 0.0 0.0 0.0 0.0 30 0.7933313371195945 0.0 0.0 0.0 0.0 31 0.8132116624697091 0.0 0.0 0.0 0.0 32 0.8348918526663361 0.0 0.0 0.0 0.0 33 0.8547721780164508 0.0 0.0 0.0 0.0 34 0.8759614959822107 0.0 0.0 0.0 0.0 35 0.9104043641813806 0.0 0.0 0.0 0.0 36 0.9292211330312833 0.0 0.0 0.0 0.0 37 0.9468107213040184 0.0 0.0 0.0 0.0 38 0.9642366854997979 0.0 0.0 0.0 0.0 39 0.9804354691184098 0.0 0.0 0.0 0.0 40 0.9996612981607017 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 25 3.4172837E-5 46.0 46 AACGTGT 25 3.4172837E-5 46.0 39 ACTATCG 25 3.4172837E-5 46.0 34 ACGTTTA 20 6.311612E-4 46.0 43 TTTACGA 30 1.861501E-6 46.0 25 TAAAGCG 20 6.311612E-4 46.0 31 TAGACCC 30 1.861501E-6 46.0 13 CGCATAT 20 6.311612E-4 46.0 42 TTCACGC 30 1.861501E-6 46.0 34 TCGGGTA 40 5.6115823E-9 46.0 36 CGATTTA 30 1.861501E-6 46.0 37 CACGATT 50 1.6370905E-11 46.0 21 GCGTTAG 20 6.311612E-4 46.0 32 TTATCCG 50 1.6370905E-11 46.0 23 ATCGTTG 20 6.311612E-4 46.0 30 ATGTACG 60 0.0 46.0 31 ACGATTG 50 1.6370905E-11 46.0 22 CTAACGA 85 0.0 46.0 13 GTTAACG 20 6.311612E-4 46.0 36 CGAATAT 60 0.0 46.0 29 >>END_MODULE