##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527816_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 594076 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46753950672978 31.0 31.0 33.0 31.0 33.0 2 32.27020953548031 31.0 31.0 34.0 31.0 34.0 3 32.93744571401639 34.0 31.0 34.0 31.0 34.0 4 36.46902921511726 37.0 37.0 37.0 35.0 37.0 5 36.481036096391705 37.0 37.0 37.0 35.0 37.0 6 31.814227472579265 33.0 32.0 35.0 28.0 35.0 7 34.728021330604165 35.0 35.0 35.0 32.0 35.0 8 36.086480517644205 37.0 35.0 37.0 35.0 37.0 9 38.68061325486975 39.0 39.0 39.0 39.0 39.0 10 38.15622411947293 39.0 39.0 39.0 37.0 39.0 11 37.737646361744964 39.0 37.0 39.0 35.0 39.0 12 37.063574357489614 39.0 35.0 39.0 34.0 39.0 13 36.951778896976144 39.0 35.0 39.0 34.0 39.0 14 37.534184178455284 39.0 36.0 40.0 33.0 40.0 15 37.547628586241494 39.0 36.0 40.0 33.0 40.0 16 37.56459779556825 39.0 36.0 40.0 33.0 40.0 17 37.258083140877595 39.0 36.0 40.0 33.0 40.0 18 37.0751503174678 39.0 35.0 40.0 32.0 40.0 19 37.12368451174597 39.0 35.0 40.0 32.0 40.0 20 36.94554063789818 39.0 35.0 40.0 31.0 40.0 21 36.952997596267146 39.0 35.0 40.0 32.0 40.0 22 37.12619260835314 39.0 35.0 40.0 32.0 40.0 23 37.212871753782345 39.0 35.0 40.0 33.0 40.0 24 37.211333230091775 39.0 35.0 40.0 33.0 40.0 25 37.24009722661747 39.0 35.0 40.0 33.0 40.0 26 37.07073169089477 38.0 35.0 40.0 33.0 40.0 27 36.98010018920138 38.0 35.0 40.0 33.0 40.0 28 36.87181943051058 38.0 35.0 40.0 33.0 40.0 29 37.15967317312936 39.0 35.0 40.0 33.0 40.0 30 37.3512042230287 39.0 35.0 40.0 33.0 40.0 31 37.44675260404393 40.0 35.0 40.0 34.0 40.0 32 37.43000558851056 40.0 35.0 40.0 34.0 40.0 33 37.37361213043449 40.0 35.0 40.0 33.0 40.0 34 36.866496879187174 39.0 35.0 40.0 32.0 40.0 35 36.849138830722 39.0 35.0 40.0 32.0 40.0 36 37.018947070745156 39.0 35.0 40.0 33.0 40.0 37 37.08860482497189 39.0 35.0 40.0 33.0 40.0 38 37.01104572478942 39.0 35.0 40.0 33.0 40.0 39 36.92517792336334 39.0 35.0 40.0 33.0 40.0 40 36.82065762629697 39.0 35.0 40.0 33.0 40.0 41 36.704844161353094 39.0 35.0 40.0 32.0 40.0 42 36.623152593270895 39.0 35.0 40.0 32.0 40.0 43 36.55816932513685 39.0 35.0 40.0 32.0 40.0 44 36.3344891899353 38.0 35.0 40.0 32.0 40.0 45 36.23464674553424 38.0 35.0 40.0 32.0 40.0 46 36.01118712083976 38.0 35.0 40.0 31.0 40.0 47 35.97540382038662 37.0 35.0 40.0 31.0 40.0 48 35.94318403705923 37.0 35.0 40.0 31.0 40.0 49 35.83243558063278 37.0 35.0 40.0 31.0 40.0 50 35.20006026165002 36.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 1.0 15 6.0 16 20.0 17 28.0 18 88.0 19 166.0 20 248.0 21 340.0 22 519.0 23 810.0 24 1217.0 25 1656.0 26 2277.0 27 3085.0 28 4279.0 29 6106.0 30 8686.0 31 11400.0 32 16601.0 33 26611.0 34 65902.0 35 40200.0 36 56148.0 37 104222.0 38 222131.0 39 21326.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.26070065109515 0.4987577347006107 0.15503066947663263 0.0855109447276106 8 98.77103266248763 0.8992115486907398 0.1856664803829813 0.14408930843865095 9 96.77852665315548 1.6772264828069137 0.7714501174933848 0.7727967465442133 10 59.26295625475528 27.551525394057325 5.251684969599849 7.93383338158754 11 35.17681239437378 20.61823739723537 23.305603996795025 20.899346211595823 12 32.249072509241245 16.028588934749088 28.61670897326268 23.10562958274699 13 27.106296164127148 16.45681697291256 28.904550932877278 27.53233593008302 14 22.80196473178516 19.133073882802872 34.11112382927437 23.9538375561376 15 26.520175869754038 21.032494158996492 31.29128259683946 21.156047374410008 16 32.85051070906753 21.35450683077586 26.916589796591683 18.87839266356493 17 31.823032743285374 21.324880991657633 25.26494926575051 21.587136999306487 18 29.344225317972782 23.393976528255646 26.737488132831487 20.52431002094008 19 29.465085275284643 25.487479716399925 24.397046842491534 20.6503881658239 20 29.868064018745077 24.918528942424874 25.134831233714205 20.078575805115843 21 29.020192702617177 24.7803311360836 26.36430355712064 19.835172604178588 22 25.81504723301396 23.223964610588542 30.509059446939453 20.451928709458052 23 29.65007844114221 21.3162962314586 29.029955763235684 20.003669564163506 24 32.1122213319508 20.939576754489327 25.277068927207967 21.671132986351914 25 28.568398656064208 22.100539324934857 23.16471293235209 26.166349086648843 26 24.336111877941544 22.914913243423403 26.828048936499705 25.920925942135348 27 22.07377507254964 22.429958456493782 26.995704253327858 28.500562217628723 28 22.330812892626533 25.28481204425023 24.33594354931019 28.04843151381305 29 28.984675361401575 24.80608541668069 22.589702327648315 23.61953689426942 30 27.231700994485553 21.894505080158094 27.14753667880877 23.72625724654758 31 29.378564358768912 20.590968158956095 25.820938735111334 24.209528747163663 32 32.988876844040156 22.3646469475286 24.74885368202048 19.897622526410764 33 33.804092405685466 20.659141254654287 25.727684673341457 19.809081666318786 34 27.041489641056028 23.748981611780312 29.861835859384993 19.347692887778667 35 23.322436859930377 29.375871100667254 29.111931806704867 18.1897602326975 36 25.495727819336246 32.55206404567766 23.400036358984373 18.552171776001725 37 28.225513233996995 29.273527292804285 23.11051111305624 19.39044836014247 38 27.374275345242022 28.984843690032925 21.974461180051037 21.666419784674016 39 27.552703694476797 27.246850571307373 22.68059978857924 22.519845945636586 40 27.079195254479227 24.680175600428228 22.894377150398267 25.34625199469428 41 22.09835105272726 26.894875403147072 22.517826002060342 28.488947542065326 42 21.96318316175035 26.976178132090844 23.44195018819141 27.6186885179674 43 21.352318558568264 23.406769504238515 23.71868245813667 31.522229479056552 44 23.052437735239263 22.361280374901526 25.86234757842431 28.723934311434903 45 25.929679030965737 23.758239686504755 24.927955345780674 25.384125936748838 46 25.575852247860542 26.296803775947858 23.198546987254158 24.928796988937442 47 21.778358324524135 26.20338138554663 26.21516438974138 25.803095900187856 48 25.105542051858688 22.94049919538914 27.79728519583353 24.156673556918644 49 26.36447188575199 22.435681629959802 27.3424612339162 23.85738525037201 50 24.24622438879874 23.03257495673954 27.442785098202922 25.278415556258793 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 1.5 8 3.0 9 2.0 10 1.0 11 3.0 12 5.0 13 81.0 14 157.0 15 431.0 16 705.0 17 909.5 18 1114.0 19 947.5 20 781.0 21 1029.0 22 1277.0 23 1358.0 24 1439.0 25 1856.0 26 2273.0 27 2773.5 28 3274.0 29 3652.0 30 4030.0 31 5213.0 32 6396.0 33 6100.0 34 5804.0 35 8874.0 36 11944.0 37 11379.0 38 10814.0 39 13047.5 40 15281.0 41 15862.0 42 16443.0 43 18061.5 44 19680.0 45 20358.5 46 21037.0 47 22655.5 48 24274.0 49 26272.5 50 28271.0 51 32784.0 52 37297.0 53 34413.5 54 31530.0 55 34742.0 56 37954.0 57 38555.0 58 39156.0 59 44154.0 60 49152.0 61 51115.5 62 53079.0 63 53121.5 64 53164.0 65 56967.5 66 60771.0 67 43078.5 68 25386.0 69 19728.0 70 14070.0 71 10521.0 72 6972.0 73 6055.0 74 5138.0 75 4258.0 76 3378.0 77 2268.5 78 1159.0 79 846.5 80 534.0 81 389.0 82 244.0 83 158.0 84 72.0 85 40.5 86 9.0 87 6.0 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 594076.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.878661989375097 #Duplication Level Percentage of deduplicated Percentage of total 1 66.5396428165169 5.9078299746160425 2 9.340992681909528 1.6587103333580215 3 3.4504986160087974 0.9190743271904604 4 1.611496606377735 0.5723173466021182 5 0.9896485041519736 0.4393377278328025 6 0.6711409395973155 0.35753001299497034 7 0.4834489819133205 0.30046660696611205 8 0.4057179691351003 0.2881786168773019 9 0.312819929473325 0.2499680175600428 >10 10.459560914571721 26.447626229640655 >50 3.8088196261327876 22.928716191194393 >100 1.833314374549729 28.496185673213525 >500 0.06825162097599818 4.100148802510117 >1k 0.020854661964888332 3.474639608400272 >5k 0.001895878360444394 1.661235262828325 >10k+ 0.001895878360444394 2.1980352682148414 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCGGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 13058 2.1980352682148414 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9869 1.661235262828325 No Hit TCGGGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3686 0.6204593351692376 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 2930 0.4932028898659431 No Hit TCGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2580 0.43428786889219567 No Hit TCGGGTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 2161 0.3637581723550522 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 2000 0.33665726270712837 No Hit TCGGGTGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGT 1369 0.23044189632302936 No Hit TCGGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1315 0.22135215022993693 No Hit TCGGGTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCT 1271 0.2139456904503801 No Hit TCGGGTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCA 1220 0.2053609302513483 No Hit TCGGGTGGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACCCGACTG 1059 0.1782600206034245 No Hit TCGGGTGGGGCTCCCACGGTGACTTGTTTACAGCTGGGTGTGACTCAGTA 1051 0.17691339155259597 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTTC 998 0.16799197409085706 No Hit TCGGGTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCG 938 0.1578922562096432 No Hit TCGGGTGGGGCCCGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGT 916 0.1541890263198648 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCT 893 0.15031746779873284 No Hit TCGGGTGGGGGGCTGGAGAGATGGCTCAGAGGGTAAGAGCACTGACTGCT 847 0.14257435075646888 No Hit TCGGGTGGGCGAGCAAGATGTTGGACACGTGTACAATCCTGTATCATTTA 845 0.14223769349376175 No Hit TCGGGTGGGAGCCGGGCGTGGTGGCCCACACCTTTAATCTCATCATCTCA 836 0.14072273581157965 No Hit TCGGGTGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTG 832 0.1400494212861654 No Hit TCGGGTGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 797 0.13415791918879066 No Hit TCGGGTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 763 0.12843474572276947 No Hit TCGGGTGGGCCAGAGTGTGGGACTCACTCTGAGTCAAATAAAACTGCTAC 731 0.12304822951945543 No Hit TCGGGTGGGGGGGCTGGAGAGATGGCTCAGCTGTTAAGAGCACTGACTGC 727 0.12237491499404117 No Hit TCGGGTGGGGGAGAGATGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 720 0.12119661457456621 No Hit TCGGGTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 689 0.11597842700260573 No Hit TCGGGTGGGGGGCCAGGCAGTGGTGGTGCACGCCATTAATCCCAGCACTT 687 0.1156417697398986 No Hit TCGGGTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGC 684 0.1151367838458379 No Hit TCGGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 665 0.1119385398501202 No Hit TCGGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 653 0.10991859627387743 No Hit TCGGGTGGGGCTTTTTCGCAACGGGTTTGCCGTCAGAACGCAGGTGTTGT 651 0.1095819390111703 No Hit TCGGGTGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 650 0.10941361037981673 No Hit TCGGGTGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGC 635 0.10688868090951327 No Hit TCGGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTG 595 0.1001555356553707 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002524929470303463 0.0 0.0 0.0 0.0 8 0.003534901258424848 0.0 0.0 0.0 0.0 9 0.005049858940606926 0.0 0.0 0.0 0.0 10 0.013971276402345828 0.0 0.0 0.0 0.0 11 0.032655754482591455 0.0 0.0 0.0 0.0 12 0.043933772783280256 0.0 0.0 0.0 0.0 13 0.05117190393148351 0.0 0.0 0.0 0.0 14 0.059251678236454594 0.0 0.0 0.0 0.0 15 0.07019303927443626 0.0 0.0 0.0 0.0 16 0.08046108578700369 0.0 0.0 0.0 0.0 17 0.09039247503686397 0.0 0.0 0.0 0.0 18 0.10251213649432059 0.0 0.0 0.0 0.0 19 0.1151367838458379 0.0 0.0 0.0 0.0 20 0.12557315898975888 0.0 0.0 0.0 0.0 21 0.13331627603202284 0.0 0.0 0.0 0.0 22 0.14156437896834748 0.0 0.0 0.0 0.0 23 0.15166409684956134 0.0 0.0 0.0 0.0 24 0.16041718567994667 0.0 0.0 0.0 0.0 25 0.16900194587897846 0.0 0.0 0.0 0.0 26 0.17994330691696012 0.0 0.0 0.0 0.0 27 0.1875180953278705 0.0 0.0 0.0 0.0 28 0.20014274267938784 0.0 0.0 0.0 0.0 29 0.2087275028784196 0.0 0.0 0.0 0.0 30 0.22067883570452265 0.0 0.0 0.0 0.0 31 0.23111521084844364 0.0 0.0 0.0 0.0 32 0.24272988641183957 0.0 0.0 0.0 0.0 33 0.25232461839899273 0.0 0.0 0.0 0.0 34 0.26360263669968154 0.0 0.0 0.0 0.0 35 0.27807889899608806 0.0 0.0 0.0 0.0 36 0.2937334617119695 0.0 0.0 0.0 0.0 37 0.30703142358890106 0.0 0.0 0.0 0.0 38 0.3196560709404184 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCT 20 7.853406E-4 44.0 26 TCGCATA 20 7.853406E-4 44.0 21 TCCGCGC 35 1.4444959E-7 44.0 30 CGTATGA 20 7.853406E-4 44.0 24 GTACACC 20 7.853406E-4 44.0 42 CGAAAAT 20 7.853406E-4 44.0 18 CGACGAG 50 2.7284841E-11 44.0 38 CTATCGC 20 7.853406E-4 44.0 18 GCGCGCA 30 2.5256431E-6 44.0 14 CTTTTCG 45 4.783942E-10 44.0 11 GTTTACG 45 4.783942E-10 44.0 39 GACGTAG 25 4.4402354E-5 44.0 10 GGCGTAT 25 4.4402354E-5 44.0 22 TGGCGAT 30 2.5256431E-6 44.0 19 CGACCTG 20 7.853406E-4 44.0 34 CCGGACT 30 2.5256431E-6 44.0 42 CGCGCAT 25 4.4402354E-5 44.0 15 GCCGGAT 40 8.300049E-9 44.0 27 CGCGCAC 20 7.853406E-4 44.0 22 ATTCGGT 30 2.5256431E-6 44.0 18 >>END_MODULE