##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527810_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1742155 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.498549784605846 31.0 31.0 33.0 3.0 34.0 2 30.297313384859557 34.0 31.0 34.0 16.0 34.0 3 32.339439372501296 34.0 31.0 34.0 28.0 34.0 4 36.1695360056941 37.0 35.0 37.0 35.0 37.0 5 34.97173271035011 35.0 35.0 37.0 33.0 37.0 6 35.62441114596577 35.0 35.0 37.0 35.0 37.0 7 36.18069230349768 37.0 35.0 37.0 35.0 37.0 8 36.653359201678384 37.0 37.0 37.0 35.0 37.0 9 38.751540477167644 39.0 39.0 39.0 39.0 39.0 10 38.34075268848065 39.0 39.0 39.0 37.0 39.0 11 38.10900235627714 39.0 38.0 39.0 37.0 39.0 12 37.637618351983605 39.0 37.0 39.0 35.0 39.0 13 37.51343479770744 39.0 37.0 39.0 35.0 39.0 14 38.25838630891052 40.0 38.0 40.0 35.0 40.0 15 38.3088393397832 40.0 38.0 40.0 35.0 40.0 16 38.31223054205854 40.0 38.0 40.0 35.0 40.0 17 38.1727056432981 40.0 38.0 40.0 34.0 40.0 18 38.11137413146362 40.0 38.0 40.0 34.0 40.0 19 38.1276843908837 40.0 38.0 40.0 34.0 40.0 20 38.075071965468055 40.0 38.0 40.0 34.0 40.0 21 38.0778105277659 40.0 38.0 40.0 34.0 40.0 22 38.163579589646154 40.0 38.0 40.0 34.0 40.0 23 38.14535733043271 40.0 38.0 40.0 34.0 40.0 24 38.074708622367126 40.0 37.0 40.0 35.0 40.0 25 38.031559763626085 40.0 37.0 40.0 35.0 40.0 26 37.884763984834876 40.0 37.0 40.0 34.0 40.0 27 37.78867035367117 40.0 37.0 40.0 34.0 40.0 28 37.65639280087019 40.0 36.0 40.0 34.0 40.0 29 37.66399200989579 40.0 36.0 40.0 34.0 40.0 30 37.816553636157515 40.0 37.0 40.0 34.0 40.0 31 37.85724921146511 40.0 37.0 40.0 34.0 40.0 32 37.857794513117376 40.0 37.0 40.0 34.0 40.0 33 37.74125781001116 40.0 36.0 40.0 34.0 40.0 34 37.316335802497484 40.0 36.0 40.0 33.0 40.0 35 37.40295438695179 40.0 35.0 40.0 33.0 40.0 36 37.427734042034146 40.0 35.0 40.0 33.0 40.0 37 37.36746845142941 40.0 35.0 40.0 33.0 40.0 38 37.29303879390755 40.0 35.0 40.0 33.0 40.0 39 37.187021820676115 40.0 35.0 40.0 33.0 40.0 40 37.05717459123901 40.0 35.0 40.0 33.0 40.0 41 36.91399559740666 40.0 35.0 40.0 33.0 40.0 42 36.8376562360984 40.0 35.0 40.0 33.0 40.0 43 36.778034101443325 40.0 35.0 40.0 33.0 40.0 44 36.426652048755706 39.0 35.0 40.0 32.0 40.0 45 36.41461465828242 39.0 35.0 40.0 32.0 40.0 46 36.23751445766881 39.0 35.0 40.0 31.0 40.0 47 36.188870106276426 39.0 35.0 40.0 31.0 40.0 48 36.12581486721905 39.0 35.0 40.0 31.0 40.0 49 36.075486968725514 39.0 35.0 40.0 31.0 40.0 50 35.5909887466959 38.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 2.0 13 4.0 14 5.0 15 13.0 16 25.0 17 88.0 18 149.0 19 298.0 20 519.0 21 895.0 22 1455.0 23 2346.0 24 3661.0 25 5122.0 26 7368.0 27 9844.0 28 13033.0 29 16983.0 30 22058.0 31 28634.0 32 37333.0 33 60742.0 34 118608.0 35 129748.0 36 138523.0 37 314250.0 38 552685.0 39 277762.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.4697371933037 0.30760753205082214 0.19602159394542965 0.02663368070005252 8 99.1109861062879 0.7443654554273299 0.07094661496824335 0.07370182331652465 9 96.99877450628675 1.5885498133059344 0.6591261971523774 0.7535494832549343 10 53.14722283608519 31.044137863737724 7.33166681495045 8.47697248522663 11 34.445499969864905 23.407790925606506 25.73226836877316 16.414440735755427 12 34.081008865456866 18.517353507581127 24.461945119693713 22.939692507268298 13 24.99634073891244 18.645815096819742 28.822349331718478 27.535494832549347 14 24.718409096779563 20.41000944232861 31.540477167645818 23.331104293246007 15 28.056631011591964 21.239441955509125 28.61783251203251 22.086094520866396 16 32.074069184429625 22.56636177607618 25.530908558652932 19.828660480841258 17 30.07378792357741 22.489847344237454 25.270713570262117 22.16565116192302 18 29.78942746196521 23.457097675005954 25.124859728324978 21.628615134703857 19 28.309191776851083 26.031380675083444 24.324529103323183 21.334898444742286 20 29.29463796275303 25.296715849049022 23.598876104594595 21.809770083603354 21 26.787283565469206 27.115210759088598 26.2017443912855 19.89576128415669 22 26.413608433233556 24.58093568023511 27.195169201362678 21.810286685168656 23 30.825615401614666 23.84110483854766 25.432409860201876 19.900869899635794 24 31.937743771363625 23.142429921562663 23.19850989148497 21.72131641558874 25 28.574495380721004 22.453914835361953 22.91845444291696 26.053135341000083 26 25.461741349076288 22.6431058086106 27.113029552479546 24.782123289833567 27 24.48209258074052 22.154687728703816 25.0540853138785 28.309134376677157 28 26.487999058637147 27.346763060692076 21.52345801607779 24.641779864592987 29 30.50170622016985 24.040226041884907 22.957601361532127 22.50046637641312 30 30.18921967333561 21.66632704897096 26.543218025950623 21.60123525174281 31 32.068788368428756 22.847450427774795 22.800152684462635 22.283608519333814 32 33.93676222838955 22.467576076755513 22.639948799044863 20.955712895810073 33 33.34387583194377 22.12902985096045 23.70110581435062 20.82598850274516 34 27.883856488085158 23.828936001676084 27.959452517141127 20.32775499309763 35 25.361692845929323 28.730796054312048 26.289853658256586 19.617657441502047 36 26.272461405558055 30.507848038779557 22.53817829068022 20.681512264982164 37 29.510060815484273 28.87911810372785 21.870843868656923 19.739977212130952 38 28.592920836550135 29.09844416828583 21.305337355172185 21.00329763999185 39 29.503344995135333 25.548702612568917 21.283295688385937 23.664656703909813 40 26.95942668706286 24.761401827047536 22.31121800299055 25.967953482899052 41 23.838636631068994 27.798215428592748 22.723810453145674 25.639337487192588 42 22.509937405110335 25.44934291150902 23.107301015122076 28.933418668258565 43 23.330358090985015 23.795299499757483 24.27786276192417 28.596479647333332 44 25.437231474811366 23.00128289388717 23.258894874451467 28.302590756849995 45 27.921453602004416 24.131205317552112 22.194638249753897 25.75270283068958 46 24.802787352445677 27.493994506803354 22.806638904115882 24.896579236635084 47 23.607543530856898 25.273813179653935 25.02664803074353 26.09199525874563 48 25.438666479159433 24.095904210589758 25.59806676214229 24.86736254810852 49 27.630492120391125 23.80488532880255 23.876807746727472 24.687814804078855 50 23.519836065103277 24.675818167729048 24.705092256429538 27.099253510738137 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 42.0 2 84.0 3 63.0 4 42.0 5 70.0 6 98.0 7 978.0 8 1858.0 9 2827.0 10 3796.0 11 4332.0 12 4868.0 13 4586.5 14 4305.0 15 4386.0 16 4467.0 17 4739.0 18 5011.0 19 5665.5 20 6320.0 21 7834.5 22 9349.0 23 10768.0 24 12187.0 25 13260.5 26 14334.0 27 16763.0 28 19192.0 29 23031.5 30 26871.0 31 27742.0 32 28613.0 33 33023.5 34 37434.0 35 42077.5 36 46721.0 37 51392.5 38 56064.0 39 58849.0 40 61634.0 41 63911.5 42 66189.0 43 76313.5 44 86438.0 45 94843.0 46 103248.0 47 102875.5 48 102503.0 49 106530.5 50 110558.0 51 112200.0 52 113842.0 53 123696.0 54 133550.0 55 137115.0 56 140680.0 57 145964.0 58 151248.0 59 155853.0 60 160458.0 61 122826.5 62 85195.0 63 66745.5 64 48296.0 65 41546.5 66 34797.0 67 29417.0 68 24037.0 69 20050.5 70 16064.0 71 14245.0 72 12426.0 73 8923.0 74 5420.0 75 3986.0 76 2552.0 77 1750.5 78 949.0 79 597.5 80 246.0 81 209.5 82 173.0 83 100.5 84 28.0 85 17.0 86 6.0 87 4.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1742155.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.767205208606915 #Duplication Level Percentage of deduplicated Percentage of total 1 67.74400682409055 5.939256094800691 2 9.664443135098715 1.6946031238464558 3 4.0881123522283636 1.0752395972348034 4 2.0467376323204585 0.7177667532292683 5 1.1365977997808052 0.49823930751647183 6 0.7592249172291821 0.3993768389301504 7 0.5360294702132361 0.32896362542542024 8 0.43468556861558105 0.30487820650182246 9 0.34619784801731535 0.2731668818711321 >10 6.807695945106579 17.153688774037818 >50 4.164879559088002 25.473158781868836 >100 2.1774142294031846 33.03132031967528 >500 0.057984400966659654 3.3730053944744585 >1k 0.03132490626934487 4.567361917004695 >5k 0.003332436837164348 2.076626049618498 >10k+ 0.0013329747348657392 3.0933483339641983 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 34921 2.004471473548565 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 18018 1.0342363337360911 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 9186 0.527277997652333 No Hit AAAGTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 7279 0.41781586598207393 No Hit AAAGTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 6579 0.377635744236305 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 6475 0.3716661261483622 No Hit AAAGTTGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 6020 0.34554904701361244 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCGCCCGACTGC 4299 0.2467633476929435 No Hit AAAGTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 4159 0.2387273233437897 No Hit AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 2895 0.16617350350571564 No Hit AAAGTTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCT 2517 0.14447623776300042 No Hit AAAGTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2226 0.12777278715154508 No Hit AAAGTTGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAG 2209 0.12679698419486213 No Hit AAAGTTGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTC 2195 0.12599338175994673 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 2073 0.11899056054139844 No Hit AAAGTTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 2027 0.1163501525409622 No Hit AAAGTTGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 1985 0.11393934523621606 No Hit AAAGTTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 1979 0.1135949441926809 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGC 1942 0.11147113775754741 No Hit AAAGTTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCA 1859 0.10670692332197768 No Hit AAAGTTGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 1750 0.10045030436442223 No Hit AAAGTTGGGGAGTGCAGTGCTAAAGTTGGGGGGCTGGTGAGATGGCTCAG 1749 0.1003929041904997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.011939236175885612 0.0 0.0 0.0 0.0 8 0.028470486265573386 0.0 0.0 0.0 0.0 9 0.04574793861625401 0.0 0.0 0.0 0.0 10 0.12530457967287642 0.0 0.0 0.0 0.0 11 0.18844477098765608 0.0 0.0 0.0 0.0 12 0.21605425464439157 0.0 0.0 0.0 0.0 13 0.23344650734291725 0.0 0.0 0.0 0.0 14 0.2491167548237671 0.0 0.0 0.0 0.0 15 0.27110102143609494 0.0 0.0 0.0 0.0 16 0.299858508571281 0.0 0.0 0.0 0.0 17 0.32304817883598186 0.0 0.0 0.0 0.0 18 0.34359744110024654 0.0 0.0 0.0 0.0 19 0.3718957268440523 0.0 0.0 0.0 0.0 20 0.3943965950216829 0.0 0.0 0.0 0.0 21 0.4177010656342289 0.0 0.0 0.0 0.0 22 0.44169433833384514 0.0 0.0 0.0 0.0 23 0.47211643051278446 0.0 0.0 0.0 0.0 24 0.49932411295206225 0.0 0.0 0.0 0.0 25 0.5250393908693544 0.0 0.0 0.0 0.0 26 0.5529358753957024 0.0 0.0 0.0 0.0 27 0.5767569475735511 0.0 0.0 0.0 0.0 28 0.6057440354044272 0.0 0.0 0.0 0.0 29 0.6291633063648183 0.0 0.0 0.0 0.0 30 0.6535009801079698 0.0 0.0 0.0 0.0 31 0.6747964446332272 0.0 0.0 0.0 0.0 32 0.701028324115822 0.0 0.0 0.0 0.0 33 0.72324219142384 0.0 0.0 0.0 0.0 34 0.7499906724717376 0.0 0.0 0.0 0.0 35 0.7788055597808461 0.0 0.0 0.0 0.0 36 0.8052670399591311 0.0 0.0 0.0 0.0 37 0.8310397180503457 0.0 0.0 0.0 0.0 38 0.8541145879672015 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATACG 30 2.5284717E-6 44.0 21 TCGCAAT 30 2.5284717E-6 44.0 21 ACACGCT 25 4.4437897E-5 44.0 24 CGTATCT 25 4.4437897E-5 44.0 21 AATCACG 25 4.4437897E-5 44.0 31 CGACGTT 20 7.857602E-4 44.0 15 CGGTTAT 20 7.857602E-4 44.0 16 CGTCTAT 20 7.857602E-4 44.0 11 CGATTTA 30 2.5284717E-6 44.0 38 ATCGAGG 25 4.4437897E-5 44.0 26 CGATTAG 70 0.0 43.999996 32 GGCGATA 60 3.6379788E-12 40.333332 31 TAATCGG 60 3.6379788E-12 40.333332 40 TTGGGAT 18530 0.0 40.224503 5 TACCACG 55 7.8216544E-11 40.0 20 CACGTTA 55 7.8216544E-11 40.0 28 TTGGGAC 10230 0.0 39.978493 5 AAAGTTG 191330 0.0 39.83986 1 AAGTTGG 189885 0.0 39.836006 2 AGTTGGG 184510 0.0 39.814865 3 >>END_MODULE