##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527808_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2231039 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76346088078245 31.0 31.0 33.0 30.0 34.0 2 32.5657749595592 34.0 31.0 34.0 31.0 34.0 3 32.92665255963701 34.0 31.0 34.0 31.0 34.0 4 36.30854054994108 37.0 37.0 37.0 35.0 37.0 5 34.79663645503283 35.0 35.0 37.0 33.0 37.0 6 35.556801561962835 36.0 35.0 37.0 35.0 37.0 7 35.949023750817446 36.0 35.0 37.0 35.0 37.0 8 36.52204779925407 37.0 37.0 37.0 35.0 37.0 9 38.62711992035997 39.0 39.0 39.0 38.0 39.0 10 38.00243339538215 39.0 38.0 39.0 37.0 39.0 11 37.72072563500683 39.0 38.0 39.0 35.0 39.0 12 37.22447433684485 39.0 37.0 39.0 35.0 39.0 13 36.932920043083065 39.0 37.0 39.0 33.0 39.0 14 37.825112873419066 40.0 37.0 40.0 34.0 40.0 15 37.91213107435594 40.0 37.0 40.0 34.0 40.0 16 37.95129130418608 40.0 37.0 40.0 34.0 40.0 17 37.83652952727407 40.0 37.0 40.0 33.0 40.0 18 37.858773871725234 40.0 37.0 40.0 34.0 40.0 19 37.841573813814996 40.0 37.0 40.0 34.0 40.0 20 37.85709528161543 40.0 37.0 40.0 33.0 40.0 21 37.89905644858741 40.0 37.0 40.0 34.0 40.0 22 37.839667078881185 40.0 37.0 40.0 34.0 40.0 23 37.85904683871506 40.0 37.0 40.0 34.0 40.0 24 37.8435043044967 40.0 37.0 40.0 34.0 40.0 25 37.7647212800852 40.0 36.0 40.0 34.0 40.0 26 37.553487411022395 40.0 36.0 40.0 34.0 40.0 27 37.47181873557567 40.0 36.0 40.0 34.0 40.0 28 37.402465398408545 40.0 35.0 40.0 33.0 40.0 29 37.337019657657265 40.0 35.0 40.0 33.0 40.0 30 37.16782539435662 39.0 35.0 40.0 33.0 40.0 31 37.1076507403053 39.0 35.0 40.0 33.0 40.0 32 37.04260033105652 39.0 35.0 40.0 33.0 40.0 33 36.716253279301704 39.0 35.0 40.0 31.0 40.0 34 36.41167904281369 39.0 35.0 40.0 30.0 40.0 35 36.556116231047504 39.0 35.0 40.0 31.0 40.0 36 36.4902765034587 39.0 35.0 40.0 31.0 40.0 37 36.519812069623164 39.0 35.0 40.0 31.0 40.0 38 36.18476010504523 39.0 35.0 40.0 30.0 40.0 39 36.266904343671264 38.0 35.0 40.0 31.0 40.0 40 36.17841328636568 38.0 35.0 40.0 31.0 40.0 41 35.835353393643054 38.0 35.0 40.0 30.0 40.0 42 35.91213421190755 38.0 35.0 40.0 30.0 40.0 43 35.938089383466625 38.0 35.0 40.0 30.0 40.0 44 35.80993205407884 38.0 35.0 40.0 30.0 40.0 45 35.660676034798136 38.0 35.0 40.0 30.0 40.0 46 35.34090484299019 38.0 34.0 40.0 28.0 40.0 47 35.065346235543174 37.0 34.0 40.0 27.0 40.0 48 35.084159891422786 37.0 34.0 40.0 28.0 40.0 49 35.0790004119157 37.0 34.0 40.0 28.0 40.0 50 34.93727989515199 37.0 34.0 40.0 28.0 40.0 51 35.222342146416985 37.0 34.0 40.0 29.0 40.0 52 34.98691192758172 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 11.0 15 16.0 16 47.0 17 136.0 18 246.0 19 527.0 20 999.0 21 1689.0 22 2963.0 23 4522.0 24 6853.0 25 9939.0 26 13520.0 27 18474.0 28 23499.0 29 28536.0 30 36113.0 31 47301.0 32 63736.0 33 91299.0 34 193015.0 35 164584.0 36 204124.0 37 344581.0 38 754294.0 39 220010.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.5424553313501 0.277045806908799 0.1610908639427639 0.019407997798335214 8 99.17173119788583 0.7089970188777516 0.06086850117815063 0.05840328205826971 9 97.01901221807418 1.5828947857926285 0.6527003786128347 0.7453926175203571 10 53.11368380382414 30.991434932334215 7.33353383782175 8.561347426019896 11 34.48093018544275 23.39434675951429 25.63325876419014 16.49146429085283 12 34.20836659511555 18.403667528895728 24.45569082387175 22.932275052116974 13 25.141604427354252 18.546605415683008 28.789501214456582 27.52228894250616 14 24.755506291015084 20.21215227524037 31.666187816528534 23.366153617216014 15 28.27368773024586 21.031142889030626 28.578657746458042 22.11651163426547 16 32.185228496678 22.391988665370707 25.502646973002264 19.92013586494902 17 30.159804467783847 22.308305681792206 25.31421458791173 22.21767526251222 18 29.87097043126543 23.41729570841209 25.07746390807153 21.634269952250946 19 28.269877846151502 25.985874742664738 24.336956906625122 21.407290504558638 20 29.36609355551382 25.205117436315543 23.58273432243901 21.846054685731627 21 26.907552938339492 27.00566865931075 26.17627930305118 19.91049909929858 22 26.67824273802475 24.308046609673788 27.220635766564367 21.79307488573709 23 30.94840565315084 23.81047574695019 25.36540150127362 19.875717098625348 24 32.18155307908109 22.98619611759364 23.10008924093214 21.732161562393127 25 28.616801409567472 22.204766478757207 22.90148222420137 26.276949887473954 26 25.635410228149308 22.40243223000584 27.18683985353909 24.775317688305762 27 24.464610434869137 22.005083730046852 25.00332804581184 28.526977789272173 28 26.56376692653064 27.246498156240207 21.50011720996361 24.689617707265537 29 30.5833739347452 23.918048944908627 22.994039996611445 22.50453712373473 30 30.2008167495055 21.616206619427093 26.563139416209218 21.61983721485819 31 32.24112173745058 22.664866010858617 22.807490142485182 22.286522109205624 32 34.13319982304209 22.20776956386688 22.67970214774372 20.97932846534731 33 33.351904650703105 21.94291538606004 23.75991634390972 20.94526361932714 34 27.86719550846041 23.531009543087325 28.146751356654903 20.455043591797363 35 25.287814332246093 28.678521531896124 26.34655871098623 19.68710542487155 36 26.55484731553326 30.34989527300957 22.444699532370343 20.65055787908683 37 29.649504109968493 28.714872308372914 21.822523048678217 19.813100532980375 38 28.72908093493659 28.978068066044564 21.20966957547582 21.08318142354302 39 29.59217655988981 25.349175877248225 21.3086817397634 23.749965823098567 40 26.974158676742093 24.669268443985068 22.29857927181013 26.05799360746271 41 24.22342236061315 27.659758525063882 22.579972828803083 25.536846285519886 42 22.58378271289744 25.226273498580703 23.13204744515896 29.057896343362888 43 23.269606672048315 23.616709524127547 24.33485026483177 28.77883353899237 44 25.301798847980695 22.701889119822646 23.395288024996425 28.60102400720023 45 28.035457918933737 23.95484794304358 22.21045889381584 25.799235244206848 46 24.805124428573414 27.279890669773145 22.902647600512584 25.012337301140857 47 23.87479555489617 25.014847342426556 24.98790922077113 26.12244788190614 48 25.566025515466112 23.828987301432203 25.701971144386093 24.903016038715595 49 27.84680142301412 23.529664878112843 23.934588324094737 24.6889453747783 50 23.51684573868946 24.409255060086355 24.788764338050566 27.285134863173617 51 23.19080930454376 24.531888505758975 27.038747417682973 25.238554772014293 52 22.947245655499522 24.121944977205686 26.325223360057805 26.605586007236987 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 41.5 2 83.0 3 66.0 4 49.0 5 72.5 6 96.0 7 1134.0 8 2172.0 9 3131.5 10 4091.0 11 4821.5 12 5552.0 13 5220.5 14 4899.5 15 4910.0 16 4994.5 17 5079.0 18 5459.5 19 5840.0 20 7581.0 21 9322.0 22 10263.0 23 11204.0 24 14076.0 25 16948.0 26 18251.0 27 19554.0 28 23349.0 29 27144.0 30 29029.0 31 30914.0 32 37086.5 33 43259.0 34 47056.0 35 50853.0 36 55186.5 37 59520.0 38 64892.0 39 74701.5 40 79139.0 41 84769.5 42 90400.0 43 96989.0 44 103578.0 45 111505.5 46 119433.0 47 121993.0 48 124553.0 49 130144.0 50 135735.0 51 140238.0 52 144741.0 53 159070.5 54 173400.0 55 173221.5 56 173043.0 57 179988.0 58 186933.0 59 192928.5 60 198924.0 61 157931.0 62 116938.0 63 94367.5 64 59489.0 65 47181.0 66 41006.0 67 34831.0 68 29401.0 69 23971.0 70 20560.0 71 17149.0 72 13755.5 73 10362.0 74 7316.5 75 4271.0 76 3091.0 77 1911.0 78 1236.5 79 562.0 80 405.5 81 249.0 82 208.5 83 168.0 84 91.5 85 15.0 86 9.0 87 3.0 88 5.0 89 4.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2231039.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.271607653298402 #Duplication Level Percentage of deduplicated Percentage of total 1 70.26702353513227 6.514882731828313 2 9.774241158551394 1.8124585826161868 3 4.172071657481627 1.1604543452884801 4 2.1162141117594384 0.7848282781842755 5 1.1790381372842194 0.546578950858753 6 0.7644393676422139 0.4252549134908485 7 0.49676733380549526 0.32240822698137706 8 0.3755831681315455 0.2785807820878798 9 0.3059705230060989 0.2553154778508355 >10 4.531145439430576 11.643330298411358 >50 3.585015292883008 23.90365545206706 >100 2.324267214844951 37.85708212111917 >500 0.07686871554752665 4.721099018068441 >1k 0.027308622628726575 4.511322408837659 >5k 0.002528576169326535 1.7492949792539143 >10k+ 0.0015171457015959208 3.5134534330554725 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 42561 1.9076761992954852 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 21401 0.9592391706285727 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 10971 0.49174398116751883 No Hit AAAGTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 8728 0.3912078632421935 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 8265 0.37045520046937774 No Hit AAAGTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 7780 0.3487164500486096 No Hit AAAGTTGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 7348 0.3293532744160904 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCGCCCGACTGCTC 5187 0.23249257408767843 No Hit AAAGTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4743 0.21259153246536702 No Hit AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3317 0.14867512401172728 No Hit AAAGTTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 2903 0.13011874736389636 No Hit AAAGTTGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 2895 0.12976017003736826 No Hit AAAGTTGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 2620 0.11743407443796365 No Hit AAAGTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2588 0.11599976513185113 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC 2466 0.1105314609022971 No Hit AAAGTTGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 2465 0.11048663873648107 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 2374 0.10640782164722355 No Hit AAAGTTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2298 0.10300133704520628 No Hit AAAGTTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGA 2232 0.10004307410134919 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.012057162604508483 0.0 0.0 0.0 0.0 8 0.025862389675841615 0.0 0.0 0.0 0.0 9 0.042132835867055664 0.0 0.0 0.0 0.0 10 0.1062285329839595 0.0 0.0 0.0 0.0 11 0.16216659592234828 0.0 0.0 0.0 0.0 12 0.18789451910074184 0.0 0.0 0.0 0.0 13 0.20434425395521996 0.0 0.0 0.0 0.0 14 0.2197630789959297 0.0 0.0 0.0 0.0 15 0.24038127527129735 0.0 0.0 0.0 0.0 16 0.2640922009879702 0.0 0.0 0.0 0.0 17 0.2835001987863054 0.0 0.0 0.0 0.0 18 0.30178764243924017 0.0 0.0 0.0 0.0 19 0.32670876663294546 0.0 0.0 0.0 0.0 20 0.34660980825525683 0.0 0.0 0.0 0.0 21 0.36834855867602495 0.0 0.0 0.0 0.0 22 0.38901157711720863 0.0 0.0 0.0 0.0 23 0.4157255879435546 0.0 0.0 0.0 0.0 24 0.4406467121372598 0.0 0.0 0.0 0.0 25 0.46166830790497165 0.0 0.0 0.0 0.0 26 0.4853792336216444 0.0 0.0 0.0 0.0 27 0.5068490510475164 0.0 0.0 0.0 0.0 28 0.5317701752412217 0.0 0.0 0.0 0.0 29 0.5493404642411002 0.0 0.0 0.0 0.0 30 0.5698690161848359 0.0 0.0 0.0 0.0 31 0.5878427046770586 0.0 0.0 0.0 0.0 32 0.6091332334396664 0.0 0.0 0.0 0.0 33 0.6291687415594259 0.0 0.0 0.0 0.0 34 0.6498317600006096 0.0 0.0 0.0 0.0 35 0.6785179461228602 0.0 0.0 0.0 0.0 36 0.702049583176269 0.0 0.0 0.0 0.0 37 0.723653867099589 0.0 0.0 0.0 0.0 38 0.7458856613443333 0.0 0.0 0.0 0.0 39 0.7664142132880689 0.0 0.0 0.0 0.0 40 0.7878840307139409 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGG 25 3.4181983E-5 46.0 28 TTATCGC 25 3.4181983E-5 46.0 41 TAAGGCG 20 6.312738E-4 46.0 42 AATCGCG 20 6.312738E-4 46.0 19 TACCGCG 20 6.312738E-4 46.0 29 ATCGCGT 35 1.0201438E-7 45.999996 45 TTGGGAT 23665 0.0 42.258186 5 TGGGATA 3845 0.0 41.69311 6 TTGGGTA 4310 0.0 41.677494 5 AAAGTTG 245930 0.0 41.52214 1 AAGTTGG 244065 0.0 41.505825 2 AGTTGGG 237450 0.0 41.491055 3 GTTGGGA 72560 0.0 41.457687 4 TTGGGAG 21905 0.0 41.25405 5 TTGGGGG 49400 0.0 41.14858 5 TTGGGAC 13045 0.0 41.133766 5 TGGGATT 8680 0.0 40.991936 6 ACCGATA 45 1.5896148E-8 40.88889 21 TGGGGGG 28950 0.0 40.804146 6 GTTGGGG 129730 0.0 40.75927 4 >>END_MODULE