##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527807_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1341618 Sequences flagged as poor quality 0 Sequence length 50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.77189706757065 33.0 31.0 34.0 3.0 34.0 2 30.241367512958234 34.0 31.0 34.0 16.0 34.0 3 32.18669993992329 34.0 31.0 34.0 28.0 34.0 4 36.0746941379737 37.0 35.0 37.0 35.0 37.0 5 36.25118252736621 37.0 35.0 37.0 35.0 37.0 6 36.55004330591868 37.0 37.0 37.0 35.0 37.0 7 36.528969498024026 37.0 37.0 37.0 35.0 37.0 8 36.65586254805764 37.0 37.0 37.0 35.0 37.0 9 38.748429880934815 39.0 39.0 39.0 39.0 39.0 10 38.2753660132765 39.0 39.0 39.0 37.0 39.0 11 38.04142237209101 39.0 38.0 39.0 37.0 39.0 12 37.662252593510225 39.0 37.0 39.0 35.0 39.0 13 37.50103308095151 39.0 37.0 39.0 35.0 39.0 14 38.34583167488808 40.0 38.0 40.0 35.0 40.0 15 38.42349685230818 40.0 38.0 40.0 35.0 40.0 16 38.501435580023525 40.0 38.0 40.0 35.0 40.0 17 38.50669191975659 40.0 38.0 40.0 35.0 40.0 18 38.43421227204763 40.0 38.0 40.0 35.0 40.0 19 38.43549132465426 40.0 38.0 40.0 35.0 40.0 20 38.339257523378485 40.0 38.0 40.0 35.0 40.0 21 38.357249231897605 40.0 38.0 40.0 35.0 40.0 22 38.356375659837596 40.0 38.0 40.0 35.0 40.0 23 38.25194354875978 40.0 38.0 40.0 35.0 40.0 24 38.10769011745519 40.0 38.0 40.0 35.0 40.0 25 37.916072235166794 40.0 37.0 40.0 34.0 40.0 26 37.66367252079206 40.0 36.0 40.0 34.0 40.0 27 37.49305390953312 40.0 36.0 40.0 33.0 40.0 28 37.297086055792334 40.0 35.0 40.0 33.0 40.0 29 37.18340615585062 40.0 35.0 40.0 33.0 40.0 30 37.241313846415295 40.0 35.0 40.0 33.0 40.0 31 37.21789809021644 40.0 35.0 40.0 33.0 40.0 32 37.07481786916991 40.0 35.0 40.0 33.0 40.0 33 36.84609106317894 40.0 35.0 40.0 33.0 40.0 34 36.45578994915095 40.0 35.0 40.0 31.0 40.0 35 36.296465909073966 40.0 35.0 40.0 30.0 40.0 36 36.0756437376362 39.0 35.0 40.0 30.0 40.0 37 35.78013786338585 39.0 35.0 40.0 28.0 40.0 38 35.53520301605971 39.0 35.0 40.0 26.0 40.0 39 35.23278161145721 39.0 35.0 40.0 24.0 40.0 40 34.86125484303282 39.0 35.0 40.0 22.0 40.0 41 34.580954489280856 39.0 35.0 40.0 21.0 40.0 42 34.37777221235851 38.0 35.0 40.0 20.0 40.0 43 34.17764222006562 38.0 34.0 40.0 18.0 40.0 44 33.77415926142911 37.0 34.0 40.0 17.0 40.0 45 33.71466169952997 37.0 34.0 40.0 18.0 40.0 46 33.54039525408872 36.0 33.0 40.0 17.0 40.0 47 33.482930312503264 36.0 33.0 40.0 17.0 40.0 48 33.32823724786042 36.0 33.0 40.0 17.0 40.0 49 33.150982619493774 35.0 33.0 40.0 15.0 40.0 50 32.60625453743167 35.0 33.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 7.0 14 4.0 15 23.0 16 60.0 17 147.0 18 314.0 19 642.0 20 1157.0 21 1964.0 22 3215.0 23 5240.0 24 7944.0 25 11665.0 26 15800.0 27 20829.0 28 27530.0 29 31602.0 30 31483.0 31 28845.0 32 30862.0 33 40417.0 34 63232.0 35 90100.0 36 129328.0 37 245554.0 38 348406.0 39 205240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.47101186775967 0.24612072885128256 0.21638051964120936 0.06648688374783285 8 99.16764682644389 0.5295098902966419 0.15764546987294448 0.14519781338652285 9 97.91729091291262 0.9749421966610466 0.5920463201895025 0.5157205702368334 10 62.26012173360822 25.187199336920045 4.791975062946382 7.760703866525345 11 34.0885408514197 31.08522694239344 17.172921055024602 17.653311151162253 12 29.51577870899168 22.385731258823302 26.17473826379789 21.923751768387127 13 21.85905376940381 24.489236131298178 28.79374009591404 24.857970003383972 14 24.55184709805623 25.95157488942456 26.100499546070495 23.39607846644872 15 23.066923669777836 25.999725704336107 25.530068916785552 25.403281709100504 16 26.221025657079732 26.754262390635787 23.360897066079914 23.663814886204566 17 29.48998895363658 25.99361368139068 20.35668871467139 24.159708650301354 18 26.725789308133912 26.293475490042624 22.84599640136015 24.13473880046332 19 28.10255974502429 25.271351457717472 20.796456219281495 25.829632577976742 20 25.016435378773988 27.496575031044607 22.53279249383953 24.95419709634188 21 27.97182208348427 25.86280148298547 23.454888053082172 22.710488380448083 22 27.34906657483725 26.941871680314367 21.300250891088226 24.40881085376016 23 27.691488933511625 26.584243801141604 22.98709468716132 22.737172578185444 24 27.846972834294114 26.771033185303118 20.879862971427038 24.50213100897573 25 25.437270519626303 25.67586302509358 22.04383065820524 26.843035797074876 26 27.629176114214328 24.722014761280782 22.756775773729927 24.89203335077496 27 28.045091821964224 23.508181911691704 22.917328181345212 25.52939808499886 28 31.337236083594583 25.535882792270232 19.95575491682431 23.171126207310873 29 31.91012642943073 25.04863530453527 19.983184483213552 23.058053782820444 30 31.064878378197076 25.52820549515585 19.05363523745209 24.353280889194988 31 32.11622086167598 26.114810624186617 18.599333044130294 23.169635470007112 32 32.000017888847644 26.650059853102746 19.164620629717252 22.185301628332358 33 30.809142393736515 27.331699485248407 19.28656294116507 22.57259517985 34 28.944453637324486 29.204810907426705 20.465065316654965 21.385670138593845 35 29.217705785104254 29.55178001487756 21.217440433864184 20.013073766154 36 29.71628287634781 28.737837447022923 19.029634366861504 22.516245309767758 37 28.7926965798014 28.869916772136335 19.258909764180267 23.078476883881997 38 30.144571703718942 28.419341422073945 18.691087925176912 22.7449989490302 39 29.630938165707377 26.990693327012604 19.382790034122976 23.99557847315704 40 28.93372032873739 27.358085535525017 20.13747579415303 23.570718341584566 41 28.677537123085706 26.842588575883745 20.132407287320238 24.34746701371031 42 27.588628059551972 24.96179985659107 21.887899536231625 25.56167254762533 43 28.790684084441327 24.707032851377964 23.172691481479827 23.329591582700886 44 27.874476937548543 24.354473479037996 22.79300069021137 24.97804889320209 45 27.438063591871902 24.358200322297403 23.115894390206453 25.087841695624242 46 27.834674251538065 25.062126477134328 21.95632437847435 25.146874892853255 47 28.67142510014028 25.027243224226268 22.241353350953847 24.059978324679605 48 28.975535510107946 24.94361286148516 22.375892392618464 23.70495923578843 49 27.723092564351404 25.31696801921262 22.70392913631153 24.256010280124446 50 26.43338118600078 25.372497983777798 22.786292372344437 25.40782845787698 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 59.5 4 119.0 5 101.0 6 83.0 7 152.5 8 222.0 9 1508.0 10 2794.0 11 4057.0 12 5320.0 13 4665.5 14 4011.0 15 4005.0 16 3999.0 17 4339.0 18 4679.0 19 5223.5 20 5768.0 21 6918.5 22 8069.0 23 9628.0 24 11187.0 25 12924.5 26 14662.0 27 17034.0 28 19406.0 29 20219.5 30 21033.0 31 20924.5 32 20816.0 33 24610.5 34 28405.0 35 29763.5 36 31122.0 37 31940.5 38 32759.0 39 32338.5 40 31918.0 41 34209.0 42 36500.0 43 36699.5 44 36899.0 45 38688.5 46 40478.0 47 43600.5 48 46723.0 49 51076.5 50 55430.0 51 61780.5 52 68131.0 53 75202.5 54 82274.0 55 99388.5 56 116503.0 57 117503.5 58 118504.0 59 115213.0 60 111922.0 61 103339.0 62 94756.0 63 91256.5 64 87757.0 65 76992.0 66 66227.0 67 54252.5 68 42278.0 69 37147.5 70 32017.0 71 25978.5 72 19940.0 73 22902.5 74 25865.0 75 17038.5 76 8212.0 77 5603.5 78 2995.0 79 2149.0 80 1303.0 81 839.0 82 375.0 83 218.5 84 62.0 85 73.0 86 84.0 87 47.0 88 10.0 89 5.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1341618.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.03468444856024 #Duplication Level Percentage of deduplicated Percentage of total 1 75.89808988906974 12.170019216196938 2 8.919014105762605 2.860271535563221 3 3.4332869593635076 1.651550190442521 4 1.7118351539103436 1.0979494608361964 5 0.9213975084709595 0.7387159150010723 6 0.6135888512987404 0.5903222167037913 7 0.45045604986403726 0.5056044432260328 8 0.34128404342044866 0.43779055548605 9 0.2832707053674522 0.4087940736679358 >10 4.237973943602431 18.52583678214143 >50 2.209381065649442 24.723104390438166 >100 0.9236131260037521 25.53024473981737 >500 0.03503196890019357 3.6682263000203212 >1k 0.020829819346061044 6.039926956378134 >5k 9.468099702755019E-4 1.0516432240808198 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 7332 0.5465042955595408 No Hit ATGCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 6522 0.48612943475713655 No Hit ATGCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 4190 0.3123094651383628 No Hit ATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3703 0.27601001179173207 No Hit ATGCTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGA 3610 0.26907808332923383 No Hit ATGCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3384 0.2522327517967111 No Hit ATGCTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2856 0.21287728697736613 No Hit ATGCTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2767 0.20624350597562047 No Hit ATGCTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 2705 0.201622220333955 No Hit ATGCTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2478 0.18470235193624415 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAA 2476 0.18455327820586784 No Hit ATGCTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 2434 0.1814227298679654 No Hit ATGCTTGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 2346 0.1748634857314079 No Hit ATGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2217 0.1652482301221361 No Hit ATGCTTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 2210 0.16472647206581903 No Hit ATGCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2198 0.16383202968356117 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAA 1932 0.1440052235435124 No Hit ATGCTTGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1914 0.14266355997012561 No Hit ATGCTTGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1690 0.12596730216797924 No Hit ATGCTTGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1674 0.1247747123249688 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAA 1604 0.11955713176179807 No Hit ATGCTTGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 1555 0.11590482536757854 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAA 1519 0.11322149822080502 No Hit ATGCTTGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 1514 0.11284881389486427 No Hit ATGCTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1483 0.11053817107403151 No Hit ATGCTTGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 1478 0.11016548674809074 No Hit ATGCTTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 1370 0.10211550530777017 No Hit ATGCTTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1344 0.10017754681287817 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.01833606883628574 0.0 0.0 0.0 0.0 8 0.036821211402947786 0.0 0.0 0.0 0.0 9 0.05508274337404537 0.0 0.0 0.0 0.0 10 0.17635422303517095 0.0 0.0 0.0 0.0 11 0.32438443729884364 0.0 0.0 0.0 0.0 12 0.3886352150910319 0.0 0.0 0.0 0.0 13 0.44684850680297966 0.0 0.0 0.0 0.0 14 0.5096085472914048 0.0 0.0 0.0 0.0 15 0.5874995714130252 0.0 0.0 0.0 0.0 16 0.6702354917718755 0.0 0.0 0.0 0.0 17 0.7321010898780428 0.0 0.0 0.0 0.0 18 0.7882273493647223 0.0 0.0 0.0 0.0 19 0.843980924525461 0.0 0.0 0.0 0.0 20 0.9094988290258479 0.0 0.0 0.0 0.0 21 0.9784454293248898 0.0 0.0 0.0 0.0 22 1.052833220782667 0.0 0.0 0.0 0.0 23 1.138923300074984 0.0 0.0 0.0 0.0 24 1.230230959930472 0.0 0.0 0.0 0.0 25 1.3166191866835417 0.0 0.0 0.0 0.0 26 1.4120263741243781 0.0 0.0 0.0 0.0 27 1.498861822068577 0.0 0.0 0.0 0.0 28 1.5927782722056503 0.0 0.0 0.0 0.0 29 1.6597869140098 0.0 0.0 0.0 0.0 30 1.7288080511740302 0.0 0.0 0.0 0.0 31 1.7838162576828873 0.0 0.0 0.0 0.0 32 1.838526316730992 0.0 0.0 0.0 0.0 33 1.892416470262027 0.0 0.0 0.0 0.0 34 1.9525677204688667 0.0 0.0 0.0 0.0 35 2.024793942836187 0.0 0.0 0.0 0.0 36 2.072646610286982 0.0 0.0 0.0 0.0 37 2.123778899806055 0.0 0.0 0.0 0.0 38 2.1710352723353443 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAA 20 7.856952E-4 44.000004 44 GTACCGA 20 7.856952E-4 44.000004 34 CATATAG 40 8.314601E-9 44.000004 18 CAACCGT 20 7.856952E-4 44.000004 12 CCGTAAA 20 7.856952E-4 44.000004 30 ATAAGCG 20 7.856952E-4 44.000004 12 TAAGGTC 40 8.314601E-9 44.000004 44 ATACGCC 20 7.856952E-4 44.000004 12 ATTGCGA 20 7.856952E-4 44.000004 12 CGATACA 20 7.856952E-4 44.000004 26 ACGAATC 20 7.856952E-4 44.000004 20 TTAATCG 30 2.528035E-6 44.0 29 TAACGGG 60 0.0 44.0 23 TCGCTAC 35 1.446333E-7 44.0 35 TTAACCG 25 4.443241E-5 44.0 31 CGTTTAG 30 2.528035E-6 44.0 13 TACCGTA 30 2.528035E-6 44.0 12 TACGTAC 30 2.528035E-6 44.0 26 TGGGATA 825 0.0 42.133335 6 TTGGGAC 5410 0.0 41.356747 5 >>END_MODULE