##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527802_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2108639 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.532611319434004 31.0 31.0 33.0 30.0 33.0 2 31.329603597391493 31.0 31.0 33.0 30.0 34.0 3 32.20099694637157 33.0 31.0 34.0 31.0 34.0 4 36.259429897673336 37.0 35.0 37.0 35.0 37.0 5 36.29287137343092 37.0 37.0 37.0 35.0 37.0 6 33.20238409704079 35.0 32.0 35.0 30.0 35.0 7 35.45661964897737 35.0 35.0 37.0 35.0 37.0 8 36.416953779191225 37.0 35.0 37.0 35.0 37.0 9 38.62719981940958 39.0 39.0 39.0 37.0 39.0 10 37.885166688086485 39.0 38.0 39.0 35.0 39.0 11 37.51010438486626 39.0 37.0 39.0 35.0 39.0 12 36.691016338026564 38.0 35.0 39.0 33.0 39.0 13 36.42150885002127 38.0 35.0 39.0 33.0 39.0 14 37.20297879343026 39.0 36.0 40.0 33.0 40.0 15 37.23679539266797 39.0 35.0 40.0 33.0 40.0 16 37.294831405470546 39.0 35.0 40.0 33.0 40.0 17 37.07686379697995 39.0 35.0 40.0 32.0 40.0 18 37.09771421281689 39.0 35.0 40.0 32.0 40.0 19 37.01595009861811 39.0 35.0 40.0 32.0 40.0 20 36.96793002500665 39.0 35.0 40.0 32.0 40.0 21 37.05695522087944 39.0 35.0 40.0 32.0 40.0 22 36.944004165720166 39.0 35.0 40.0 32.0 40.0 23 36.98920725643413 39.0 35.0 40.0 32.0 40.0 24 37.03797994820356 39.0 35.0 40.0 32.0 40.0 25 36.96786173451217 38.0 35.0 40.0 32.0 40.0 26 36.7269404578024 38.0 35.0 40.0 32.0 40.0 27 36.637690472385266 38.0 35.0 40.0 31.0 40.0 28 36.517428066160214 38.0 35.0 40.0 31.0 40.0 29 36.40678798030388 38.0 35.0 40.0 31.0 40.0 30 36.22235669547988 38.0 35.0 40.0 31.0 40.0 31 36.14539093699775 38.0 34.0 40.0 31.0 40.0 32 36.09235578019756 38.0 35.0 40.0 31.0 40.0 33 35.80218804641287 38.0 35.0 40.0 30.0 40.0 34 35.35879446410694 38.0 34.0 40.0 27.0 40.0 35 35.424089187385796 38.0 34.0 40.0 28.0 40.0 36 35.42702710136728 38.0 34.0 40.0 29.0 40.0 37 35.54889148877546 38.0 34.0 40.0 29.0 40.0 38 35.22881773504142 37.0 34.0 40.0 29.0 40.0 39 35.29105930412935 37.0 34.0 40.0 29.0 40.0 40 35.19752930681828 37.0 34.0 40.0 29.0 40.0 41 34.844282022669596 37.0 34.0 40.0 28.0 40.0 42 34.887664982009724 37.0 33.0 40.0 28.0 40.0 43 34.93022229030194 36.0 33.0 39.0 28.0 40.0 44 34.808638652704424 36.0 33.0 39.0 28.0 40.0 45 34.62168061958448 36.0 33.0 39.0 27.0 40.0 46 34.153520825518264 35.0 33.0 39.0 26.0 40.0 47 33.88961363230027 35.0 33.0 39.0 24.0 40.0 48 33.86144712300209 35.0 32.0 39.0 24.0 40.0 49 33.8396600840637 35.0 32.0 39.0 26.0 40.0 50 33.76286125790142 35.0 32.0 38.0 26.0 40.0 51 34.29150983169713 35.0 33.0 39.0 27.0 40.0 52 34.08233889252736 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 3.0 15 24.0 16 65.0 17 155.0 18 417.0 19 719.0 20 1249.0 21 2254.0 22 3580.0 23 5556.0 24 8075.0 25 11674.0 26 15667.0 27 21327.0 28 28151.0 29 36940.0 30 49405.0 31 65891.0 32 89610.0 33 137146.0 34 234715.0 35 183132.0 36 262457.0 37 390483.0 38 522813.0 39 37127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.23865583440313 0.6415512565213866 0.07175244316357612 0.04804046591189862 8 99.30519164257134 0.6110576537757293 0.04462594118765706 0.03912476246526788 9 98.20277439618636 1.0074744894692738 0.33836991538143796 0.45138119896293294 10 57.099674244856516 30.0982766609173 4.447323605415626 8.354725488810555 11 38.49359705478273 22.655798360933286 21.066669069480362 17.783935514803627 12 34.99271330939056 16.4845665853662 25.21379904288975 23.30892106235349 13 27.313257508753274 16.346562877761436 27.969794734897725 28.37038487858756 14 25.36180920489472 16.56826986506462 32.41593274145077 25.653988188589892 15 29.078709063049672 18.017593338641653 28.60769434692235 24.29600325138632 16 34.53018748111934 18.721364823471443 25.000011855988625 21.748435839420594 17 32.016196228941986 19.475879939619823 24.73258817654421 23.775335654893986 18 32.08092992683906 21.260917587126105 24.432299696628963 22.225852789405867 19 30.073711052484565 24.194705684567154 22.460316820470457 23.271266442477824 20 31.254946911254134 24.00406138746367 22.326865812498013 22.414125888784188 21 30.811580360602264 24.565323889010873 23.805876681594146 20.817219068792713 22 28.25708905127905 21.53208775897629 28.081478147753124 22.12934504199154 23 30.06180763990422 20.606798982661328 26.643394151393384 22.68799922604106 24 32.4928069717007 20.357823221518714 24.209881350008228 22.939488456772352 25 29.48835718204965 20.271653896186116 22.714129824972414 27.525859096791816 26 25.107521960847734 20.83599895477604 26.40082062410873 27.655658460267503 27 24.081030465622614 19.70161796305579 26.202209102648677 30.015142468672924 28 25.033540591822494 24.981231970005297 22.717402077833142 27.26782536033906 29 29.492767609818465 24.062819667093326 22.22855595481256 24.21585676827565 30 28.92206774132509 20.844914658222674 26.061122838001193 24.17189476245104 31 31.737959887870804 21.194381778957897 23.44417418059706 23.623484152574243 32 34.78864803316262 21.063633936392144 22.75396594675523 21.39375208369 33 34.52776885943967 20.7364560742735 23.468550093211782 21.26722497307505 34 28.26477173190859 22.535531212312776 29.09616107830691 20.103535977471726 35 25.703830764772917 27.327010455559247 27.04896381030608 19.920194969361756 36 25.92307170644193 30.329515863075663 22.56920222001016 21.178210210472255 37 29.6826531236499 28.149104706874912 21.397925391686297 20.770316777788896 38 29.348171972537735 28.832341619404744 20.813425152432448 21.006061255625074 39 30.69515455229653 25.619416125756945 20.623492214646507 23.061937107300018 40 27.955425276683204 23.57307248893718 21.30118052449945 27.170321709880163 41 23.91461980927034 26.594405206391418 22.16619345464065 27.32478152969759 42 22.192608597299017 24.09317099797547 22.628814130820878 31.08540627390464 43 23.006925320076125 21.900050221967817 24.413804354372655 30.6792201035834 44 24.48825996294292 20.481789438590482 23.60973120576827 31.42021939269832 45 28.57046654263722 22.308417894196207 22.86436891283904 26.256746650327536 46 25.94161447265274 25.804701516001554 22.999195215492076 25.25448879585363 47 24.065712528318027 23.803600331777986 24.18446211039443 27.94622502950956 48 25.6682627988954 22.602920651662043 27.623505019114226 24.10531153032833 49 28.58488342480624 21.70257687541585 25.120610972290656 24.591928727487257 50 24.572579754049887 21.08729848968932 26.673366090639504 27.666755665621285 51 22.95087020585316 22.268771468231403 27.69592139764085 27.08443692827459 52 23.20971014953247 22.419864187279092 27.269437774792177 27.10098788839626 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 4.5 8 9.0 9 11.5 10 14.0 11 57.0 12 100.0 13 591.5 14 2147.0 15 3211.0 16 4061.0 17 4911.0 18 4287.0 19 3663.0 20 4221.0 21 4779.0 22 5061.5 23 5344.0 24 5095.5 25 4847.0 26 5454.0 27 6061.0 28 6635.0 29 7209.0 30 9916.5 31 12624.0 32 15943.0 33 19262.0 34 20811.5 35 22361.0 36 24095.0 37 25829.0 38 29711.0 39 39003.5 40 44414.0 41 45460.5 42 46507.0 43 48259.0 44 50011.0 45 55088.5 46 60166.0 47 64204.5 48 68243.0 49 72340.5 50 76438.0 51 83940.0 52 91442.0 53 97917.5 54 104393.0 55 108016.5 56 111640.0 57 121936.0 58 132232.0 59 152818.5 60 173405.0 61 187413.0 62 201421.0 63 208722.0 64 210793.0 65 205563.0 66 166197.5 67 126832.0 68 106888.0 69 86944.0 70 69647.0 71 52350.0 72 42843.5 73 33337.0 74 28826.5 75 24316.0 76 24562.5 77 24809.0 78 19240.5 79 13672.0 80 9422.5 81 5173.0 82 4262.5 83 3352.0 84 2057.0 85 762.0 86 502.5 87 243.0 88 135.5 89 19.0 90 10.0 91 8.0 92 6.0 93 5.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2108639.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.871698844866136 #Duplication Level Percentage of deduplicated Percentage of total 1 67.03327972588703 5.276657905858535 2 10.157052653228043 1.5990651927531938 3 4.455189374190946 1.0520972715143624 4 2.2645019976678453 0.7130191103695613 5 1.270217698297522 0.4999385594208563 6 0.7835971120454128 0.3700944289036989 7 0.5334251187025019 0.2939273323499145 8 0.3845399155491909 0.242158592722679 9 0.328217326038972 0.23252651516214246 >10 5.727536694975994 12.782038794736794 >50 4.314187288977866 24.263364184193787 >100 2.6052677218882256 36.2841767738673 >500 0.09448504794082055 4.984565894283389 >1k 0.043463122052777456 5.795460278286954 >5k 0.001889700958816411 0.9828016133872257 >10k+ 0.003149501598027352 4.6281075521896105 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 36486 1.7303104040094108 No Hit GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 16954 0.8040257246498808 No Hit GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 16406 0.7780373975820423 No Hit GTCGGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 12613 0.5981583381508168 No Hit GTCGGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10880 0.5159726249965025 No Hit GTCGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 7689 0.36464278617629664 No Hit GTCGGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6078 0.2882427954713917 No Hit GTCGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6054 0.2871046205633112 No Hit GTCGGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4980 0.23617129342670792 No Hit GTCGGTGGGGGGGCTGGAGAGATGGCTCAGTGGGGAAGAGCACCAACTGTTC 3533 0.16754883126035325 No Hit GTCGGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3380 0.16029296622133993 No Hit GTCGGTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3368 0.15972387876729965 No Hit GTCGGTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 3309 0.15692586545160173 No Hit GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 3019 0.14317291864562878 No Hit GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 2978 0.1412285365109912 No Hit GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTACT 2874 0.13629644524264228 No Hit GTCGGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 2696 0.12785498134104512 No Hit GTCGGTGGGAGAGGCCTTCACAGAGGGCCTCAATTCTACTCTCTGGTTTTGT 2634 0.12491469616183709 No Hit GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 2569 0.12183213911911903 No Hit GTCGGTGAGCTACTCTAGTATTAATAAATATTAGCCCACCAACAGCTACCAT 2276 0.10793692044963599 No Hit GTCGGTGGGGGGTCTGGAGAGATGGCTCAGTGGATAAGAGCACTGACTGCTC 2204 0.10452239572539444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0035567965877516257 0.0 0.0 0.0 0.0 8 0.0044104277688120155 0.0 0.0 0.0 0.0 9 0.0056908745404026006 0.0 0.0 0.0 0.0 10 0.01787883084776484 0.0 0.0 0.0 0.0 11 0.027505893611945904 0.0 0.0 0.0 0.0 12 0.03599478146804645 0.0 0.0 0.0 0.0 13 0.04301352673454299 0.0 0.0 0.0 0.0 14 0.04823016172991204 0.0 0.0 0.0 0.0 15 0.05496436326938845 0.0 0.0 0.0 0.0 16 0.06350067507999235 0.0 0.0 0.0 0.0 17 0.07194213898158955 0.0 0.0 0.0 0.0 18 0.08005163520166325 0.0 0.0 0.0 0.0 19 0.09186019987299865 0.0 0.0 0.0 0.0 20 0.10096559913764282 0.0 0.0 0.0 0.0 21 0.10902767140321316 0.0 0.0 0.0 0.0 22 0.1164732322602399 0.0 0.0 0.0 0.0 23 0.12439303266230019 0.0 0.0 0.0 0.0 24 0.13288192051840073 0.0 0.0 0.0 0.0 25 0.13994808973940062 0.0 0.0 0.0 0.0 26 0.14810500991397768 0.0 0.0 0.0 0.0 27 0.1563093540430581 0.0 0.0 0.0 0.0 28 0.1675962552148566 0.0 0.0 0.0 0.0 29 0.17575317538943366 0.0 0.0 0.0 0.0 30 0.18400494347301743 0.0 0.0 0.0 0.0 31 0.1932051906466683 0.0 0.0 0.0 0.0 32 0.20349618877389633 0.0 0.0 0.0 0.0 33 0.2117479568574801 0.0 0.0 0.0 0.0 34 0.22075850821311757 0.0 0.0 0.0 0.0 35 0.23190313752140598 0.0 0.0 0.0 0.0 36 0.24608289991790913 0.0 0.0 0.0 0.0 37 0.2578440406347412 0.0 0.0 0.0 0.0 38 0.26927321367004975 0.0 0.0 0.0 0.0 39 0.2793745159792643 0.0 0.0 0.0 0.0 40 0.288811882925432 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAT 20 6.312657E-4 46.000004 46 ACCGATA 20 6.312657E-4 46.000004 43 CACGATT 20 6.312657E-4 46.000004 32 CACTACG 20 6.312657E-4 46.000004 18 CGTACTC 20 6.312657E-4 46.000004 40 ACGTCTA 20 6.312657E-4 46.000004 38 ATACGTC 20 6.312657E-4 46.000004 39 CCGCATA 20 6.312657E-4 46.000004 38 GCGTTAG 25 3.4181336E-5 46.0 32 CGTAATC 25 3.4181336E-5 46.0 14 CGTAAGC 25 3.4181336E-5 46.0 13 CGGTCGA 30 1.8621486E-6 46.0 39 CGCGTTA 25 3.4181336E-5 46.0 37 GTCGGTG 216210 0.0 44.55858 1 CGGTGGG 211445 0.0 44.482582 3 TCGGTGG 215440 0.0 44.415707 2 GGTGGGA 64685 0.0 43.994587 4 GGTGGGG 122395 0.0 43.974266 4 GTCGGTA 1265 0.0 43.818184 1 GTGGGGG 55285 0.0 43.765938 5 >>END_MODULE