##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527798_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 899386 Sequences flagged as poor quality 0 Sequence length 50 %GC 62 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.505567131354056 33.0 31.0 34.0 31.0 34.0 2 33.062663861790156 34.0 31.0 34.0 31.0 34.0 3 33.232628704471715 34.0 34.0 34.0 31.0 34.0 4 36.30962901357148 37.0 37.0 37.0 35.0 37.0 5 36.41711901230395 37.0 37.0 37.0 35.0 37.0 6 35.59711959047617 37.0 35.0 37.0 35.0 37.0 7 36.387440987518154 37.0 37.0 37.0 35.0 37.0 8 36.66828147202647 37.0 37.0 37.0 35.0 37.0 9 38.7626903242879 39.0 39.0 39.0 39.0 39.0 10 38.285140084457616 39.0 39.0 39.0 37.0 39.0 11 37.994845372287315 39.0 38.0 39.0 35.0 39.0 12 37.295677273161914 39.0 37.0 39.0 35.0 39.0 13 37.206635415716946 39.0 37.0 39.0 35.0 39.0 14 37.953926345306684 40.0 37.0 40.0 34.0 40.0 15 37.97241784951066 40.0 37.0 40.0 34.0 40.0 16 37.950887605544224 40.0 37.0 40.0 34.0 40.0 17 37.73069516314463 40.0 37.0 40.0 33.0 40.0 18 37.6311083339078 40.0 36.0 40.0 33.0 40.0 19 37.56879137544947 40.0 36.0 40.0 33.0 40.0 20 37.46025733111256 40.0 36.0 40.0 33.0 40.0 21 37.44315121649659 40.0 36.0 40.0 33.0 40.0 22 37.5231546855299 40.0 36.0 40.0 33.0 40.0 23 37.447747685643314 40.0 35.0 40.0 33.0 40.0 24 37.37707391487081 40.0 35.0 40.0 33.0 40.0 25 37.360400317549974 39.0 35.0 40.0 33.0 40.0 26 37.243386043367366 39.0 35.0 40.0 33.0 40.0 27 37.102038501822356 39.0 35.0 40.0 33.0 40.0 28 36.89375974275784 39.0 35.0 40.0 32.0 40.0 29 36.982286804553326 39.0 35.0 40.0 33.0 40.0 30 37.088096768239666 39.0 35.0 40.0 33.0 40.0 31 37.11550657893274 39.0 35.0 40.0 33.0 40.0 32 37.030047165510695 39.0 35.0 40.0 33.0 40.0 33 36.87745417429224 39.0 35.0 40.0 33.0 40.0 34 36.39773022928976 39.0 35.0 40.0 31.0 40.0 35 36.37190260911333 39.0 35.0 40.0 31.0 40.0 36 36.334865119092356 38.0 35.0 40.0 31.0 40.0 37 36.2901090299382 38.0 35.0 40.0 32.0 40.0 38 36.215791662311844 37.0 35.0 40.0 32.0 40.0 39 36.08264860693851 37.0 35.0 40.0 32.0 40.0 40 35.798108932093676 37.0 35.0 40.0 31.0 40.0 41 35.69619495967249 36.0 35.0 40.0 31.0 40.0 42 35.52716186376039 36.0 35.0 40.0 31.0 40.0 43 35.41319855990643 36.0 35.0 40.0 31.0 40.0 44 35.07976664079717 35.0 34.0 39.0 30.0 40.0 45 35.015919749695904 35.0 34.0 39.0 30.0 40.0 46 34.842348001859044 35.0 34.0 39.0 30.0 40.0 47 34.71513343547709 35.0 34.0 39.0 30.0 40.0 48 34.58166793790431 35.0 34.0 39.0 29.0 40.0 49 34.45824818264905 35.0 34.0 38.0 29.0 40.0 50 33.94250855583698 35.0 33.0 37.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 2.0 15 9.0 16 26.0 17 72.0 18 148.0 19 235.0 20 495.0 21 819.0 22 1235.0 23 1774.0 24 2506.0 25 3510.0 26 4788.0 27 6073.0 28 8044.0 29 9963.0 30 13114.0 31 16904.0 32 22616.0 33 34472.0 34 82926.0 35 89323.0 36 104839.0 37 165019.0 38 237298.0 39 93175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.40981958803006 0.4864429733173521 0.08650345902649141 0.017233979626100474 8 99.22280311234553 0.558158565954996 0.1150785091162193 0.10395981258325125 9 98.65019024089769 0.7912064452860061 0.2589544422528258 0.2996488715634889 10 67.63458626218332 24.32670733144612 2.8587280655914147 5.1799783407791535 11 41.63596053307479 23.419532881321256 18.148603602902426 16.795902982701534 12 34.96874534404583 15.956107833566454 24.226083127822758 24.84906369456496 13 27.484194772878386 16.07997011294372 27.297289484159194 29.138545630018704 14 27.638077532894663 16.57419617383415 29.516025377312964 26.271700915958217 15 29.144327352215843 17.18027632184624 27.037667920114387 26.63772840582353 16 34.567249212240355 17.950690804615594 23.636013902818146 23.846046080325912 17 34.9765284316189 18.718881548078357 22.344577300513908 23.960012719788836 18 32.87398291723464 20.076363207788425 22.95343712265924 24.09621675231769 19 33.04298710453576 22.121647435027896 20.40836748626285 24.426997974173492 20 33.165959888190386 22.022357474988492 20.19366545621124 24.618017180609883 21 33.01563511106466 21.63264716150796 22.379378820662097 22.972338906765284 22 32.011616814137646 19.147062551562954 25.618588681611676 23.222731952687724 23 32.89232876651405 20.215680475346513 22.716275325611026 24.175715432528413 24 33.45793685914613 19.12760483263026 22.456209013704907 24.958249294518705 25 31.11178070372454 19.888679610311925 21.175557547037645 27.82398213892589 26 27.85911721997007 19.326184752709068 23.83170296179838 28.982995065522477 27 26.07601185697798 18.480163133515532 23.566966797348414 31.876858212158073 28 28.452744427865234 22.607089725657282 20.972863709241636 27.96730213723585 29 31.422548271821 21.112069789834397 21.50811776033872 25.957264178005886 30 29.657455197212318 20.23413751159124 23.744532380979912 26.363874910216527 31 34.48041219231787 20.160309366612335 20.47007625202082 24.889202189048973 32 35.65399061137265 19.845316693833347 21.189567104669184 23.311125590124817 33 35.43606415932648 19.123046167051744 22.505798400241943 22.93509127337984 34 31.270333316284667 21.454748016980474 26.274814150987453 21.00010451574741 35 28.85412937270538 24.986490783712444 25.205084357550593 20.954295486031583 36 28.723039940581685 26.13327314412277 22.255182980388845 22.888503934906705 37 31.716526608152673 26.312951280095533 19.619940715110086 22.350581396641708 38 32.38742875695196 25.739004165063722 20.189996286355356 21.683570791628956 39 33.678642985325546 22.359587540833413 19.595590769702888 24.366178704138157 40 28.902384515658458 23.34592711027301 20.428825887883512 27.322862486185016 41 27.49264498224344 23.762989417224638 21.210915002012484 27.533450598519433 42 25.183736460207296 22.06394140002179 21.465088404756134 31.287233735014773 43 26.30005359211729 19.813406034783732 24.23953675062765 29.64700362247133 44 26.96906556250598 19.509420871572384 23.1087653132248 30.412748252696844 45 28.975434351880057 21.386479220268047 22.314445632909564 27.323640794942328 46 28.53735770848112 24.1711567669499 21.197461379207596 26.094024145361388 47 26.489738554969723 21.69257693582066 23.988143022017244 27.829541487192373 48 27.925273464341227 21.141867896542752 25.47193307434183 25.46092556477419 49 29.544489240437365 20.13962859106101 23.96379307661004 26.352089091891578 50 26.557784977751485 20.774506163093488 24.84528333774375 27.822425521411276 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 24.0 10 48.0 11 35.0 12 22.0 13 19.5 14 17.0 15 138.0 16 259.0 17 503.5 18 748.0 19 906.0 20 1064.0 21 969.0 22 874.0 23 788.5 24 703.0 25 925.5 26 1148.0 27 1253.0 28 1358.0 29 1656.5 30 1955.0 31 2380.5 32 2806.0 33 3424.5 34 4043.0 35 4101.5 36 4160.0 37 4802.0 38 5444.0 39 7294.5 40 9145.0 41 9388.5 42 9632.0 43 11587.5 44 13543.0 45 15476.5 46 17410.0 47 18837.5 48 20265.0 49 21325.0 50 22385.0 51 24427.0 52 26469.0 53 30112.0 54 33755.0 55 36378.0 56 39001.0 57 43095.5 58 47190.0 59 51883.5 60 56577.0 61 67006.5 62 77436.0 63 81137.5 64 84839.0 65 91199.5 66 97560.0 67 103751.5 68 109943.0 69 87688.0 70 65433.0 71 56661.5 72 47890.0 73 39668.5 74 31447.0 75 27668.0 76 23889.0 77 19541.5 78 15194.0 79 16014.0 80 16834.0 81 11484.5 82 6135.0 83 3912.0 84 1689.0 85 1179.0 86 669.0 87 448.5 88 228.0 89 158.5 90 89.0 91 74.0 92 59.0 93 41.0 94 23.0 95 13.5 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 899386.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.266655251471558 #Duplication Level Percentage of deduplicated Percentage of total 1 68.42446276231956 6.340659071855688 2 9.016954033332134 1.6711400889050976 3 3.486795531718321 0.9693279637441543 4 1.6330105707737903 0.6053018392547804 5 0.905894916189722 0.4197307941195437 6 0.6179283203148435 0.3435677228687126 7 0.40555295585712053 0.263068359970024 8 0.3635578272920341 0.26951720395914547 9 0.32156269872694765 0.2681829603751893 >10 8.841774354174916 24.29913296404436 >50 4.242707845889877 26.94760647819735 >100 1.6366101532222264 25.518520412814965 >500 0.07559123141715561 4.9040122928308865 >1k 0.022797355506761215 3.9788255543226154 >5k 0.0035995824484359815 1.883951940546106 >10k+ 0.0011998608161453272 1.317454352191384 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 11849 1.317454352191384 No Hit GGGCGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5815 0.646552203392092 No Hit GGGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 5788 0.6435501553281905 No Hit GGGCGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 5341 0.5938495818258234 No Hit GGGCGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4774 0.5308065724838945 No Hit GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3241 0.3603569546334944 No Hit GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3206 0.3564654108469556 No Hit GGGCGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2367 0.26317954693535367 No Hit GGGCGAGGGGGGGCTGGAGAGATGGCTCAGCGGGTAAGAGCACTGACTGC 2301 0.25584120722359477 No Hit GGGCGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2225 0.24739099785853905 No Hit GGGCGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2018 0.2243752960352952 No Hit GGGCGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1715 0.190685645540402 No Hit GGGCGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1559 0.17334047894897187 No Hit GGGCGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1521 0.169115374266444 No Hit GGGCGAGGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGTCTG 1346 0.14965765533374992 No Hit GGGCGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1322 0.1469891681658376 No Hit GGGCGAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1285 0.1428752504486394 No Hit GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTGC 1283 0.14265287651798003 No Hit GGGCGAGGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTG 1188 0.13209011481166041 No Hit GGGCGAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1169 0.12997756247039646 No Hit GGGCGAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1127 0.12530770992654988 No Hit GGGCGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1123 0.12486296206523116 No Hit GGGCGAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 1015 0.11285476980962567 No Hit GGGCGAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 991 0.11018628264171335 No Hit GGGCGAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 990 0.11007509567638367 No Hit GGGCGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 989 0.10996390871105398 No Hit GGGCGAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 985 0.10951916084973527 No Hit GGGCGAGGGGGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGTGCCGACTG 958 0.1065171127858339 No Hit GGGCGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 942 0.10473812134055902 No Hit GGGCGAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTG 929 0.10329269079127315 No Hit GGGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 921 0.10240319506863572 No Hit GGGCGAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 903 0.10040182969270146 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.10095776451934987 0.0 0.0 0.0 0.0 7 0.10206963417264667 0.0 0.0 0.0 0.0 8 0.10462693437522932 0.0 0.0 0.0 0.0 9 0.11763580931880194 0.0 0.0 0.0 0.0 10 0.1439871201019362 0.0 0.0 0.0 0.0 11 0.1862381669272148 0.0 0.0 0.0 0.0 12 0.19491075022292986 0.0 0.0 0.0 0.0 13 0.20869793392381025 0.0 0.0 0.0 0.0 14 0.22570953961925136 0.0 0.0 0.0 0.0 15 0.24238758441870342 0.0 0.0 0.0 0.0 16 0.254729337570298 0.0 0.0 0.0 0.0 17 0.2664039689299144 0.0 0.0 0.0 0.0 18 0.2803023395961245 0.0 0.0 0.0 0.0 19 0.3013166760434341 0.0 0.0 0.0 0.0 20 0.3172164120855784 0.0 0.0 0.0 0.0 21 0.3304476609598104 0.0 0.0 0.0 0.0 22 0.34000973997816286 0.0 0.0 0.0 0.0 23 0.3563542238816259 0.0 0.0 0.0 0.0 24 0.3709197163398141 0.0 0.0 0.0 0.0 25 0.3848180870060241 0.0 0.0 0.0 0.0 26 0.3992723924988826 0.0 0.0 0.0 0.0 27 0.41361551102641136 0.0 0.0 0.0 0.0 28 0.4320725472711383 0.0 0.0 0.0 0.0 29 0.4440807395267438 0.0 0.0 0.0 0.0 30 0.45931335377691 0.0 0.0 0.0 0.0 31 0.4729893505124607 0.0 0.0 0.0 0.0 32 0.488555525658616 0.0 0.0 0.0 0.0 33 0.5018979614981777 0.0 0.0 0.0 0.0 34 0.5165746409216955 0.0 0.0 0.0 0.0 35 0.5332526857211476 0.0 0.0 0.0 0.0 36 0.550820226243237 0.0 0.0 0.0 0.0 37 0.5686101406959859 0.0 0.0 0.0 0.0 38 0.5818413895702179 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTATC 30 2.5271002E-6 44.000004 14 ATACGGA 60 0.0 44.000004 10 TACGTAT 30 2.5271002E-6 44.000004 13 TCACGCG 25 4.442065E-5 44.0 39 AACGTTA 35 1.4456054E-7 44.0 37 TCCGATT 25 4.442065E-5 44.0 24 TCCGATA 20 7.8555674E-4 44.0 26 ACGTTAT 35 1.4456054E-7 44.0 38 CCGATAG 20 7.8555674E-4 44.0 27 TTATGCG 25 4.442065E-5 44.0 24 GCAAACG 20 7.8555674E-4 44.0 43 CGACAAA 25 4.442065E-5 44.0 31 TTATAAG 25 4.442065E-5 44.0 20 CCGTATC 20 7.8555674E-4 44.0 44 ACGATAA 20 7.8555674E-4 44.0 32 GTTCGTT 35 1.4456054E-7 44.0 26 GTTCGAA 25 4.442065E-5 44.0 29 TACGATA 20 7.8555674E-4 44.0 31 TCGTAAG 20 7.8555674E-4 44.0 18 AGTTATG 20 7.8555674E-4 44.0 38 >>END_MODULE