##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527794_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427164 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06139562322667 31.0 31.0 34.0 31.0 34.0 2 32.509331310690975 34.0 31.0 34.0 31.0 34.0 3 32.46503450665318 34.0 31.0 34.0 31.0 34.0 4 36.22320467080559 37.0 37.0 37.0 35.0 37.0 5 36.1647353241378 37.0 37.0 37.0 35.0 37.0 6 36.305486885598974 37.0 37.0 37.0 35.0 37.0 7 36.400092236237136 37.0 37.0 37.0 35.0 37.0 8 36.5401227631542 37.0 37.0 37.0 35.0 37.0 9 38.62649474206628 39.0 39.0 39.0 38.0 39.0 10 37.941050743976554 39.0 38.0 39.0 35.0 39.0 11 37.69739959359871 39.0 38.0 39.0 35.0 39.0 12 37.22475676789242 39.0 37.0 39.0 34.0 39.0 13 37.08134112425204 39.0 37.0 39.0 33.0 39.0 14 37.96445159236265 40.0 38.0 40.0 33.0 40.0 15 37.989931267616186 40.0 38.0 40.0 33.0 40.0 16 37.91687969960015 40.0 38.0 40.0 33.0 40.0 17 37.94836175333128 40.0 38.0 40.0 34.0 40.0 18 37.96730295624163 40.0 38.0 40.0 34.0 40.0 19 37.72436113530166 40.0 37.0 40.0 33.0 40.0 20 37.78407356425167 40.0 37.0 40.0 33.0 40.0 21 37.7563113932822 40.0 37.0 40.0 33.0 40.0 22 37.7383815115506 40.0 37.0 40.0 33.0 40.0 23 37.71092133232201 40.0 37.0 40.0 33.0 40.0 24 37.63613272654062 40.0 37.0 40.0 33.0 40.0 25 37.535316646533886 40.0 36.0 40.0 33.0 40.0 26 37.38757947767134 40.0 36.0 40.0 33.0 40.0 27 37.2363143897894 40.0 35.0 40.0 33.0 40.0 28 37.12830903353279 39.0 35.0 40.0 32.0 40.0 29 37.04324334447659 39.0 35.0 40.0 32.0 40.0 30 36.847447350432155 39.0 35.0 40.0 32.0 40.0 31 36.70510389452295 39.0 35.0 40.0 31.0 40.0 32 36.40743367886807 39.0 35.0 40.0 31.0 40.0 33 36.296321787416545 38.0 35.0 40.0 31.0 40.0 34 36.1108075586894 38.0 35.0 40.0 30.0 40.0 35 36.03300371754174 38.0 35.0 40.0 30.0 40.0 36 35.939112378383946 38.0 35.0 40.0 30.0 40.0 37 35.68701014130404 38.0 35.0 40.0 30.0 40.0 38 35.59644539333839 37.0 34.0 40.0 30.0 40.0 39 35.45744257474881 37.0 34.0 40.0 29.0 40.0 40 35.239896152297476 37.0 34.0 40.0 29.0 40.0 41 35.08371023775412 37.0 34.0 40.0 28.0 40.0 42 34.973853133691044 36.0 34.0 40.0 28.0 40.0 43 34.82622599282711 36.0 34.0 40.0 28.0 40.0 44 34.601780580760554 36.0 34.0 40.0 27.0 40.0 45 34.532807071756984 35.0 33.0 39.0 27.0 40.0 46 34.36936165032634 35.0 33.0 39.0 26.0 40.0 47 34.13531805114663 35.0 33.0 39.0 26.0 40.0 48 33.92609630025002 35.0 33.0 39.0 26.0 40.0 49 34.16556404565928 35.0 33.0 39.0 27.0 40.0 50 34.10279424296055 35.0 33.0 39.0 27.0 40.0 51 34.07521467164836 35.0 33.0 39.0 27.0 40.0 52 33.613956232266766 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 3.0 14 1.0 15 6.0 16 11.0 17 35.0 18 57.0 19 124.0 20 254.0 21 455.0 22 835.0 23 1318.0 24 1859.0 25 2695.0 26 3579.0 27 4629.0 28 5603.0 29 6656.0 30 8209.0 31 10043.0 32 12814.0 33 17722.0 34 31284.0 35 38925.0 36 54229.0 37 76714.0 38 106943.0 39 42160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 97.6297159873023 1.2084351677575826 0.22473803972244852 0.9371108052176681 8 98.29714114485303 0.9043365077581444 0.20554166549615602 0.5929806818926688 9 96.95807699150677 1.719480106001442 0.54030770383272 0.7821351986590631 10 53.716605331909996 32.97843451227163 6.666760307516551 6.638199848301824 11 37.59539661581969 24.707606446236106 20.520924047906657 17.17607289003755 12 32.14620145892444 15.643874483804815 26.966691949696138 25.24323210757461 13 23.854538303789646 18.785290895300164 27.750465863228175 29.609704937682015 14 26.142652470713823 21.141528780515213 26.770982573437834 25.944836175333126 15 27.21507430401438 19.317639126892715 27.294669026416084 26.172617542676818 16 29.447706267382085 20.710780871047184 25.35255779981459 24.48895506175614 17 32.68159301813823 21.05912483261698 20.636102293264415 25.62317985598037 18 30.819544718187863 20.4443726531262 22.006067927072507 26.73001470161343 19 30.877133840866737 20.97414576134693 22.6641289996348 25.48459139815153 20 28.879540410708763 24.509087844481275 21.841260031276043 24.77011171353391 21 29.451451901377457 19.183030405183956 26.365517693438584 25.0 22 30.40237473195307 18.57717410643219 22.88910114148196 28.131350020132786 23 26.91027333764081 24.08325607963218 22.98180558286747 26.02466499985954 24 26.365283591313876 23.97744191926286 24.402805479862536 25.254469009560733 25 26.440430373346068 24.089810939124085 22.61332883857254 26.85642984895731 26 28.31839761777678 23.468269798016685 21.300250021069193 26.91308256313734 27 26.402271727018196 20.630483842271353 23.345366182543472 29.621878248166983 28 28.04122070211909 23.834171418939796 21.855306158758697 26.269301720182415 29 30.120983978050585 22.508216984577352 21.878014064855652 25.492784972516407 30 27.680235225814908 22.57399968162111 22.991871974230037 26.753893118333945 31 31.698598196477228 21.146679027258852 22.583129664484836 24.571593111779084 32 30.661291681883306 20.77867048721334 24.002022642357502 24.558015188545852 33 32.2227528537049 21.164236686612167 23.14146323192029 23.471547227762642 34 28.22616138064069 23.572913447762453 23.569167813767077 24.63175735782978 35 27.792136041426712 25.157784832055135 23.770261538893728 23.279817587624425 36 30.017276736803662 23.348175408040003 23.316805723328745 23.317742131827586 37 29.628901311908308 23.43502729630774 23.168150874137332 23.76792051764662 38 31.23039394705546 22.68238896536225 22.389293105224223 23.697923982358063 39 28.916060342163664 22.79054414697868 21.332322012154584 26.961073498703076 40 25.99750915339308 25.03745633995374 23.50525793372101 25.459776572932174 41 27.448474122351136 24.460394602541413 23.100261257971177 24.990870017136277 42 27.150930321843603 20.966888595480892 22.188667584346998 29.69351349832851 43 26.310503694131526 23.87490518863949 24.90729555861449 24.90729555861449 44 26.509022295886357 21.0724686537255 24.114859866468148 28.303649183919994 45 25.933599273347003 22.77837083649371 22.874586809749886 28.413443080409394 46 27.750699965352887 22.712588139449956 22.315316833815587 27.221395061381575 47 26.9357904692343 22.48597728272982 25.11166671348709 25.466565534548792 48 30.203387925948817 22.485509078480394 22.985785318987556 24.325317676583232 49 28.571227912464536 23.29760934910245 23.675918382635242 24.455244355797774 50 26.256894307572736 25.346002940322688 23.72835725857048 24.6687454935341 51 25.9808879025386 24.622861477090765 23.501746401850344 25.894504218520286 52 27.076719948310252 24.17596052101769 24.12586266632956 24.621456864342502 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 12.0 8 24.0 9 26.0 10 28.0 11 38.5 12 49.0 13 195.0 14 502.0 15 663.0 16 800.0 17 937.0 18 1004.5 19 1072.0 20 768.0 21 464.0 22 605.5 23 747.0 24 730.0 25 713.0 26 855.5 27 998.0 28 1012.0 29 1026.0 30 1299.0 31 1572.0 32 2093.5 33 2615.0 34 2549.5 35 2484.0 36 4013.5 37 5543.0 38 4820.0 39 4693.0 40 5289.0 41 7125.5 42 8962.0 43 9316.5 44 9671.0 45 11338.0 46 13005.0 47 14584.5 48 16164.0 49 15898.0 50 15632.0 51 17614.0 52 19596.0 53 20500.0 54 21404.0 55 24155.5 56 26907.0 57 29086.0 58 31265.0 59 33825.5 60 36386.0 61 36282.5 62 36179.0 63 36261.0 64 34424.0 65 32505.0 66 31354.0 67 30203.0 68 26671.5 69 23140.0 70 18101.5 71 13063.0 72 10958.5 73 8854.0 74 7762.0 75 6670.0 76 6864.5 77 7059.0 78 5504.5 79 3950.0 80 2397.5 81 845.0 82 682.5 83 520.0 84 280.0 85 40.0 86 84.0 87 128.0 88 68.0 89 4.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 427164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.589693888061728 #Duplication Level Percentage of deduplicated Percentage of total 1 67.8045528915103 7.85834012229495 2 11.281232956955582 2.614920733020573 3 5.0053527783949745 1.7403151951007108 4 2.6238713717252105 1.2163946399977528 5 1.405861797321591 0.8146753939938758 6 0.7817076373038157 0.5435851335786723 7 0.5312380067465208 0.43098201159273725 8 0.3211667036984669 0.2977779026322443 9 0.2989476235683843 0.31182403011489734 >10 4.633688165309956 15.337903006807691 >50 3.4641565839174255 28.783558539577303 >100 1.7916658250348434 34.26974183217687 >500 0.04241824388470317 3.181213772696201 >1k 0.014139414628234391 2.598767686415522 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACACCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2145 0.502149057504846 No Hit ACACCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTACACCCGGGAAG 1881 0.4403460965811725 No Hit ACACCCGGGATGTTTCAGGATTCTTTTAACCCTGTTCCAAACTGAGTGTAAT 1863 0.4361322583363767 No Hit ACACCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1631 0.3818205654034516 No Hit ACACCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1305 0.30550327274770345 No Hit ACACCCGGGCTCCACCTCTGACATGCCCAGATATTTCTCTAGATCTTAACAT 1236 0.28935022614265243 No Hit ACACCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1040 0.24346620969931923 No Hit ACACCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 993 0.2324634098379077 No Hit ACACCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 963 0.22544034609658117 No Hit ACACCCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 855 0.20015731662780573 No Hit ACACCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 794 0.18587708702044178 No Hit ACACCCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 748 0.17510838928374114 No Hit ACACCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 700 0.16387148729761872 No Hit ACACCCGGGATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAGGCTGCT 689 0.161296363925799 No Hit ACACCCGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 668 0.15638021930687043 No Hit ACACCCGGGGTACAGCCTTGAGTGTGAATAATTATTGTAAACTATATTTTAC 658 0.15403919805976157 No Hit ACACCCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 596 0.1395248663276868 No Hit ACACCCCCCAGTCTGTCCCATCTCAGTTTGCAAAAAGCACTGACACGTATCT 595 0.1392907642029759 No Hit ACACCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 579 0.13554513020760176 No Hit ACACCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 567 0.13273590471107116 No Hit ACACCCGGGTGTAGCACGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAA 560 0.13109718983809496 Illumina Single End Adapter 2 (97% over 34bp) ACACCCGGGGTCTGGGCAGCTTTCCCTAGCAGAGGCTCTTTGGCTTCTTTCT 540 0.1264151473438773 No Hit ACACCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAA 538 0.12594694309445553 No Hit ACACCCGGGGAGCGTGGTCACGTGGCCGCTGGTCACCGCCGCCACCTCCCGC 529 0.12384002397205757 No Hit ACACCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 507 0.11868977722841811 No Hit ACACCCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 504 0.11798747085428549 No Hit ACACCCGGGGATTTCCAGGGTTCCCTCTCCCGGCTTCTGTGCTCCGCTCAGT 504 0.11798747085428549 No Hit ACACCCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 502 0.11751926660486371 No Hit ACACCCGGGGCTTCCTGTTCTCCACCATGGCGCAAGATCAAGGGGAAAAGGA 488 0.11424183685891133 No Hit ACACCCGGGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACCCGACTGC 469 0.10979389648940455 No Hit ACACCCGGGACGATGGGTGCCACCCCTCATTGGCGAGATGTATGGGTTGCGC 457 0.10698467099287393 No Hit ACACCCGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCT 453 0.10604826249403039 No Hit ACACCCGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 452 0.10581416036931951 No Hit ACACCCGGGTGTAGCACTGCACGATCGGAAGAGCTCGTATGCCGTCTTCTGC 447 0.1046436497457651 Illumina Single End Adapter 2 (96% over 31bp) ACACCCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 439 0.10277083274807801 No Hit ACACCCGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAAGA 432 0.10113211787510182 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.009832289237857122 0.0 0.0 0.0 0.0 8 0.025283029468775458 0.0 0.0 0.0 0.0 9 0.025751233718197226 0.0 0.0 0.0 0.0 10 0.04330889307151352 0.0 0.0 0.0 0.0 11 0.06601679916846925 0.0 0.0 0.0 0.0 12 0.08193574364880936 0.0 0.0 0.0 0.0 13 0.1610622618010881 0.0 0.0 0.0 0.0 14 0.22146060997649614 0.0 0.0 0.0 0.0 15 0.26594001367156406 0.0 0.0 0.0 0.0 16 0.3179106853573803 0.0 0.0 0.0 0.0 17 0.3532601061887238 0.0 0.0 0.0 0.0 18 0.38650260789766927 0.0 0.0 0.0 0.0 19 0.4239589478514107 0.0 0.0 0.0 0.0 20 0.44362352632712493 0.0 0.0 0.0 0.0 21 0.5248569636018017 0.0 0.0 0.0 0.0 22 0.5396053974585874 0.0 0.0 0.0 0.0 23 0.5580994653107472 0.0 0.0 0.0 0.0 24 0.5810414735324138 0.0 0.0 0.0 0.0 25 0.5995355413845737 0.0 0.0 0.0 0.0 26 0.6515062130703898 0.0 0.0 0.0 0.0 27 0.6753846297909 0.0 0.0 0.0 0.0 28 0.764109335056325 0.0 0.0 0.0 0.0 29 0.7816669944096413 0.0 0.0 0.0 0.0 30 0.8294238278506616 0.0 0.0 0.0 0.0 31 0.8408948319614948 0.0 0.0 0.0 0.0 32 0.8685188826773792 0.0 0.0 0.0 0.0 33 0.8874811547789607 0.0 0.0 0.0 0.0 34 0.9062093247558315 0.0 0.0 0.0 0.0 35 0.9731625324231443 0.0 0.0 0.0 0.0 36 0.9893155790281952 0.0 0.0 0.0 0.0 37 1.0136621999981272 0.0 0.0 0.0 0.0 38 1.0380088209680591 0.0 0.0 0.0 0.0 39 1.0520549484507122 0.0 0.0 0.0 0.0 40 1.070783118427583 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAACTA 35 1.0175427E-7 46.000004 32 ACACGCG 35 1.0175427E-7 46.000004 12 GCGGTCA 35 1.0175427E-7 46.000004 16 TATATAG 35 1.0175427E-7 46.000004 36 ATATAGG 35 1.0175427E-7 46.000004 37 CGTCGTA 35 1.0175427E-7 46.000004 35 CGGTCAG 35 1.0175427E-7 46.000004 17 CGGTAAC 70 0.0 46.000004 20 GTAACGG 35 1.0175427E-7 46.000004 37 TGCCGAT 35 1.0175427E-7 46.000004 15 ACAACTC 30 1.8586361E-6 46.0 41 TTTAGTA 20 6.3069805E-4 46.0 23 AACGTTC 20 6.3069805E-4 46.0 18 AGACTAC 50 1.6370905E-11 46.0 43 CCTTATA 20 6.3069805E-4 46.0 26 TCGTTTA 25 3.4135264E-5 46.0 28 TCGTTGT 25 3.4135264E-5 46.0 23 ATCTCGT 20 6.3069805E-4 46.0 30 GTCGCAT 20 6.3069805E-4 46.0 38 GCAAGTA 20 6.3069805E-4 46.0 37 >>END_MODULE