##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527793_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 429517 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03466684671387 31.0 31.0 34.0 31.0 34.0 2 32.48551046873581 34.0 31.0 34.0 31.0 34.0 3 32.470721764214225 34.0 31.0 34.0 31.0 34.0 4 36.22345797721627 37.0 37.0 37.0 35.0 37.0 5 36.16551614953541 37.0 37.0 37.0 35.0 37.0 6 36.2618708921882 37.0 37.0 37.0 35.0 37.0 7 36.363834260343594 37.0 35.0 37.0 35.0 37.0 8 36.508887890351254 37.0 37.0 37.0 35.0 37.0 9 38.578144753292655 39.0 39.0 39.0 37.0 39.0 10 37.84248353382986 39.0 38.0 39.0 35.0 39.0 11 37.65935224915428 39.0 38.0 39.0 35.0 39.0 12 37.17372537059069 39.0 37.0 39.0 34.0 39.0 13 36.89004858946212 39.0 37.0 39.0 33.0 39.0 14 37.8850709052261 40.0 38.0 40.0 33.0 40.0 15 37.94331074206609 40.0 38.0 40.0 33.0 40.0 16 37.899577897964456 40.0 38.0 40.0 33.0 40.0 17 37.96528193296191 40.0 38.0 40.0 34.0 40.0 18 38.000849791742816 40.0 38.0 40.0 34.0 40.0 19 37.7139461301881 40.0 37.0 40.0 33.0 40.0 20 37.78547065657471 40.0 37.0 40.0 33.0 40.0 21 37.8215227802392 40.0 37.0 40.0 34.0 40.0 22 37.69101572231134 40.0 37.0 40.0 33.0 40.0 23 37.689250949322144 40.0 37.0 40.0 33.0 40.0 24 37.659929641900085 40.0 37.0 40.0 33.0 40.0 25 37.522756957233355 40.0 36.0 40.0 33.0 40.0 26 37.32352386517879 40.0 36.0 40.0 33.0 40.0 27 37.18877483312651 40.0 35.0 40.0 33.0 40.0 28 37.071105451006595 39.0 35.0 40.0 32.0 40.0 29 37.01356174493675 39.0 35.0 40.0 32.0 40.0 30 36.78534493396071 39.0 35.0 40.0 31.0 40.0 31 36.664746680573764 39.0 35.0 40.0 31.0 40.0 32 36.38012697984015 39.0 35.0 40.0 31.0 40.0 33 36.09547701255131 38.0 35.0 40.0 30.0 40.0 34 36.01417406063089 38.0 35.0 40.0 30.0 40.0 35 36.00632571004174 38.0 35.0 40.0 30.0 40.0 36 35.760954746843545 38.0 35.0 40.0 30.0 40.0 37 35.59023973439934 38.0 35.0 40.0 29.0 40.0 38 35.24523825599452 37.0 34.0 40.0 28.0 40.0 39 35.266354998754416 37.0 34.0 40.0 28.0 40.0 40 35.142320327251305 37.0 34.0 40.0 28.0 40.0 41 34.776646791628735 36.0 34.0 40.0 27.0 40.0 42 34.80128376758079 36.0 34.0 40.0 27.0 40.0 43 34.752361373356585 36.0 34.0 40.0 28.0 40.0 44 34.523341334568826 35.0 33.0 39.0 27.0 40.0 45 34.47121767008058 35.0 33.0 39.0 27.0 40.0 46 34.12629535035866 35.0 33.0 39.0 26.0 40.0 47 33.80532086040832 35.0 33.0 39.0 25.0 40.0 48 33.774111385579616 35.0 33.0 39.0 25.0 40.0 49 33.70080811702447 35.0 33.0 39.0 26.0 40.0 50 33.38266005769271 35.0 33.0 38.0 24.0 40.0 51 33.63840080834984 35.0 33.0 38.0 26.0 40.0 52 33.39718567600351 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 5.0 16 13.0 17 41.0 18 67.0 19 152.0 20 302.0 21 517.0 22 824.0 23 1362.0 24 1898.0 25 2791.0 26 3900.0 27 4768.0 28 5821.0 29 7146.0 30 8457.0 31 10467.0 32 13469.0 33 18708.0 34 32633.0 35 39852.0 36 56871.0 37 78720.0 38 104019.0 39 36710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 97.61755646458697 1.219974995168992 0.22839608211083612 0.9340724581332054 8 98.28761143330765 0.8982182311759488 0.20185464137624354 0.6123156941401621 9 96.9195631371983 1.736136171560148 0.5543435999040782 0.789957091337479 10 53.63512969218913 32.961675556497184 6.68774460615063 6.7154501451630555 11 37.58407699811649 24.911237506315235 20.40082231902346 17.103863176544817 12 32.0720716525772 15.633607051641729 27.023144601959874 25.2711766938212 13 23.992065506138292 18.70682650512087 27.759320352861472 29.541787635879373 14 26.11514794525013 21.152131347536884 26.78497009431524 25.947750612897742 15 27.22709462023622 19.422281306677036 27.389137100510574 25.961486972576175 16 29.500578556844083 20.69603764228191 25.37897219434854 24.42441160652547 17 32.643178267682075 21.032229224920084 20.75098308099563 25.573609426402218 18 30.83044442944051 20.349136355487676 22.10319964052645 26.71721957454536 19 30.892374457821226 20.9658756230836 22.689206713587588 25.45254320550758 20 29.02469518086595 24.424178786869902 21.734646125764524 24.816479906499627 21 29.230042117075694 19.346149279306758 26.47182765757816 24.951980946039388 22 30.569686415205915 18.601126381493632 22.811437032760054 28.017750170540396 23 26.886479464142283 24.126169627744652 22.802357066192958 26.18499384192011 24 26.32817793009357 24.02279770067308 24.42650698342557 25.22251738580778 25 26.39802382676355 24.066567795919603 22.743453693334605 26.79195468398224 26 28.2582528747407 23.520372883960356 21.288330846043348 26.933043395255602 27 26.46367896963333 20.67624797155875 23.26590100042606 29.594172058381858 28 27.953957584915152 23.660995955922584 22.046857283879334 26.338189175282935 29 30.15689716588633 22.42262820796383 21.85035749458112 25.570117131568715 30 27.68109294859109 22.443581976964825 23.16718546646582 26.708139607978264 31 31.740769282705923 20.979379163106465 22.6382192090185 24.64163234516911 32 30.796685579383354 20.666236726369387 23.98740911302696 24.549668581220303 33 32.205477315216854 21.286235469143246 23.175799793721787 23.332487421918106 34 28.215181238460872 23.632824777599023 23.620252516198427 24.53174146774167 35 27.83824621609855 25.168968865027463 23.85167525383163 23.14110966504236 36 30.112428611673113 23.331323323640273 23.199780218245145 23.35646784644147 37 29.49056731165472 23.41094764584405 23.255889755236698 23.84259528726453 38 31.335430262364472 22.70364153223272 22.379789391339575 23.581138814063237 39 28.74438031556376 22.886870601163633 21.256201733575157 27.11254734969745 40 25.93634244977498 24.990861828519012 23.658434939711352 25.41436078199466 41 27.59890761017608 24.475399111094557 23.035875180726258 24.889818098003104 42 27.09881099001902 20.95563155823867 22.25360113802248 29.69195631371983 43 26.249484886512057 23.935257510180037 25.00925458130877 24.80600302199913 44 26.686720199666137 20.965642803428036 24.125703988433518 28.221933008472305 45 25.804566524724283 22.83914257177248 22.813066770349018 28.543224133154215 46 27.86013126372181 22.623784390373373 22.37047660511691 27.14560774078791 47 27.292982582761567 22.46709676217705 25.11006549216911 25.129855162892273 48 30.204858014933052 22.57116714821532 22.803055525159657 24.42091931169197 49 28.579543999422608 23.361357059208366 23.604420779619897 24.454678161749126 50 26.415019661619915 25.312385772856487 23.581371633718806 24.691222931804795 51 25.979879725365933 24.641399525513542 23.443076758312245 25.935643990808284 52 27.00242365261445 24.147356216401214 24.092876416998628 24.757343713985712 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 14.5 8 29.0 9 29.0 10 29.0 11 34.0 12 39.0 13 179.0 14 460.0 15 601.0 16 781.0 17 961.0 18 987.0 19 1013.0 20 740.5 21 468.0 22 609.5 23 751.0 24 758.0 25 765.0 26 928.0 27 1091.0 28 1095.5 29 1100.0 30 1326.5 31 1553.0 32 2131.5 33 2710.0 34 2574.5 35 2439.0 36 3994.0 37 5549.0 38 4884.0 39 4755.0 40 5291.0 41 7156.0 42 9021.0 43 9294.0 44 9567.0 45 11231.0 46 12895.0 47 14731.5 48 16568.0 49 16155.5 50 15743.0 51 17706.5 52 19670.0 53 20561.0 54 21452.0 55 24457.0 56 27462.0 57 29242.5 58 31023.0 59 33603.0 60 36183.0 61 36496.5 62 36810.0 63 36975.0 64 34753.5 65 32367.0 66 31261.5 67 30156.0 68 26663.0 69 23170.0 70 18125.5 71 13081.0 72 11020.0 73 8959.0 74 7836.0 75 6713.0 76 6975.5 77 7238.0 78 5530.0 79 3822.0 80 2330.0 81 838.0 82 670.0 83 502.0 84 283.0 85 64.0 86 100.0 87 136.0 88 71.0 89 3.0 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 429517.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.632908592675026 #Duplication Level Percentage of deduplicated Percentage of total 1 73.5397492032288 11.496401772223217 2 10.70205224436303 3.346084089803197 3 4.025556250558485 1.887934586989572 4 2.000119143359247 1.2507071897037836 5 1.0127185535996186 0.7915868289264452 6 0.571888124385667 0.53641648642545 7 0.3574300777410419 0.39113702135189066 8 0.2859440621928335 0.35761099095029997 9 0.21892592261638816 0.30802040431461386 >10 3.498346885890448 15.507651617980198 >50 2.5317963839990467 27.82707087263135 >100 1.2212194322818932 31.31773596854141 >500 0.023828671849402794 2.4751057583285414 >1k 0.010425043934113722 2.5065364118300324 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACACCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1981 0.4612157376774377 No Hit ACACCCGGGATGTTTCAGGATTCTTTTAACCCTGTTCCAAACTGAGTGTAAT 1810 0.42140357657554883 No Hit ACACCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTACACCCGGGAAG 1707 0.39742315205218887 No Hit ACACCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1565 0.3643627609617314 No Hit ACACCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1354 0.3152378136371785 No Hit ACACCCGGGCTCCACCTCTGACATGCCCAGATATTTCTCTAGATCTTAACAT 1252 0.29149020876938514 No Hit ACACCCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1097 0.2554031621565619 No Hit ACACCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 929 0.21628946002137284 No Hit ACACCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 916 0.21326280449900703 No Hit ACACCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 820 0.1909121175646133 No Hit ACACCCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 786 0.18299624927534883 No Hit ACACCCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 744 0.17321782374155156 No Hit ACACCCGGGATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAGGCTGCT 690 0.16064556234095506 No Hit ACACCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 681 0.15855018544085564 No Hit ACACCCGGGGTACAGCCTTGAGTGTGAATAATTATTGTAAACTATATTTTAC 631 0.14690920266252558 No Hit ACACCCGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 598 0.13922615402882774 No Hit ACACCCCCCAGTCTGTCCCATCTCAGTTTGCAAAAAGCACTGACACGTATCT 598 0.13922615402882774 No Hit ACACCCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 576 0.1341041216063625 No Hit ACACCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 540 0.12572261400596482 No Hit ACACCCGGGGTCTGGGCAGCTTTCCCTAGCAGAGGCTCTTTGGCTTCTTTCT 537 0.12502415503926503 No Hit ACACCCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 536 0.12479133538369842 No Hit ACACCCGGGTGTAGCACGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAA 529 0.12316159779473222 Illumina Single End Adapter 2 (97% over 34bp) ACACCCGGGGCTTCCTGTTCTCCACCATGGCGCAAGATCAAGGGGAAAAGGA 520 0.1210662208946328 No Hit ACACCCGGGGATTTCCAGGGTTCCCTCTCCCGGCTTCTGTGCTCCGCTCAGT 493 0.11478009019433455 No Hit ACACCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 491 0.11431445088320137 No Hit ACACCCGGGGAGCGTGGTCACGTGGCCGCTGGTCACCGCCGCCACCTCCCGC 486 0.11315035260536835 No Hit ACACCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAA 485 0.11291753294980175 No Hit ACACCCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 482 0.11221907398310195 No Hit ACACCCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 481 0.11198625432753534 No Hit ACACCCGGGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACCCGACTGC 457 0.10639858259393692 No Hit ACACCCGGGTGTAGCACTGCACGATCGGAAGAGCTCGTATGCCGTCTTCTGC 442 0.10290628776043788 Illumina Single End Adapter 2 (96% over 31bp) ACACCCGGGAGGGGGTATGGGGCTGCTGCTGGATCCCGCGCTCCTAGCATTG 441 0.1026734681048713 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.00745022897813125 0.0 0.0 0.0 0.0 8 0.021885047623260545 0.0 0.0 0.0 0.0 9 0.024678883490059766 0.0 0.0 0.0 0.0 10 0.04307163627982129 0.0 0.0 0.0 0.0 11 0.06844897873658086 0.0 0.0 0.0 0.0 12 0.08451353497067636 0.0 0.0 0.0 0.0 13 0.15994710337425527 0.0 0.0 0.0 0.0 14 0.21698791898807265 0.0 0.0 0.0 0.0 15 0.267044144934892 0.0 0.0 0.0 0.0 16 0.31710037088171134 0.0 0.0 0.0 0.0 17 0.3557484337057672 0.0 0.0 0.0 0.0 18 0.3871790872072584 0.0 0.0 0.0 0.0 19 0.4255943303757476 0.0 0.0 0.0 0.0 20 0.4467809190323084 0.0 0.0 0.0 0.0 21 0.5229129464025871 0.0 0.0 0.0 0.0 22 0.5368821257365832 0.0 0.0 0.0 0.0 23 0.5580687143931439 0.0 0.0 0.0 0.0 24 0.5832132371943369 0.0 0.0 0.0 0.0 25 0.6011403506729652 0.0 0.0 0.0 0.0 26 0.6509637569642179 0.0 0.0 0.0 0.0 27 0.6747113618320113 0.0 0.0 0.0 0.0 28 0.7606218147360873 0.0 0.0 0.0 0.0 29 0.7766863709701828 0.0 0.0 0.0 0.0 30 0.8202236465611373 0.0 0.0 0.0 0.0 31 0.8320974489950339 0.0 0.0 0.0 0.0 32 0.861898364907559 0.0 0.0 0.0 0.0 33 0.8863444287420521 0.0 0.0 0.0 0.0 34 0.9086951156764459 0.0 0.0 0.0 0.0 35 0.9780753730352931 0.0 0.0 0.0 0.0 36 0.9964681258250546 0.0 0.0 0.0 0.0 37 1.0176547144816155 0.0 0.0 0.0 0.0 38 1.0397725817604426 0.0 0.0 0.0 0.0 39 1.0563027773056712 0.0 0.0 0.0 0.0 40 1.0735314318175997 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAC 70 0.0 46.000004 30 ACCGATT 35 1.01756086E-7 46.000004 36 GATTTGG 35 1.01756086E-7 46.000004 9 TAGCCAC 35 1.01756086E-7 46.000004 40 CCCGTCG 35 1.01756086E-7 46.000004 23 CTTATAC 35 1.01756086E-7 46.000004 42 TCTAATG 35 1.01756086E-7 46.000004 29 CGGGATA 285 0.0 46.000004 6 TTAACGG 35 1.01756086E-7 46.000004 23 GCAATCG 35 1.01756086E-7 46.000004 19 TTCATCG 35 1.01756086E-7 46.000004 33 ATACCGA 35 1.01756086E-7 46.000004 34 TACCGAT 35 1.01756086E-7 46.000004 35 TCACGCG 25 3.413558E-5 46.0 23 TCACGAA 30 1.8586616E-6 46.0 13 CTTAACG 30 1.8586616E-6 46.0 28 TATTTAC 20 6.3070183E-4 46.0 14 AGGTATT 20 6.3070183E-4 46.0 16 TGATATG 65 0.0 46.0 21 TTAGGAT 20 6.3070183E-4 46.0 32 >>END_MODULE