##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527792_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 754672 Sequences flagged as poor quality 0 Sequence length 50 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45043542095109 33.0 31.0 34.0 31.0 34.0 2 32.83593269658871 34.0 31.0 34.0 31.0 34.0 3 33.116775234803995 34.0 33.0 34.0 31.0 34.0 4 36.39179140076749 37.0 37.0 37.0 35.0 37.0 5 36.25154504208451 37.0 37.0 37.0 35.0 37.0 6 36.354143256938116 37.0 37.0 37.0 35.0 37.0 7 36.586160610172364 37.0 37.0 37.0 35.0 37.0 8 36.635835170776176 37.0 37.0 37.0 35.0 37.0 9 38.650120847202494 39.0 39.0 39.0 38.0 39.0 10 38.037783301884794 39.0 38.0 39.0 37.0 39.0 11 36.729095554095025 38.0 35.0 39.0 33.0 39.0 12 36.47073430576462 39.0 35.0 39.0 33.0 39.0 13 36.28147327580724 38.0 35.0 39.0 32.0 39.0 14 36.95435235440032 39.0 35.0 40.0 33.0 40.0 15 37.09165836283842 39.0 35.0 40.0 33.0 40.0 16 37.18164447601077 39.0 35.0 40.0 33.0 40.0 17 37.115038056268155 39.0 35.0 40.0 33.0 40.0 18 37.034312920050034 39.0 35.0 40.0 33.0 40.0 19 36.98430178938665 39.0 35.0 40.0 32.0 40.0 20 36.79417415777981 39.0 35.0 40.0 31.0 40.0 21 36.72694627599805 38.0 35.0 40.0 31.0 40.0 22 36.7094247567155 38.0 35.0 40.0 32.0 40.0 23 36.422277492738566 38.0 35.0 40.0 31.0 40.0 24 36.21374981448894 38.0 35.0 40.0 31.0 40.0 25 36.16918608349057 38.0 35.0 40.0 31.0 40.0 26 36.01165804481947 38.0 35.0 40.0 31.0 40.0 27 35.90854172408675 38.0 35.0 40.0 30.0 40.0 28 35.6994654631416 38.0 34.0 40.0 30.0 40.0 29 36.02989245659041 38.0 35.0 40.0 30.0 40.0 30 36.22739680284945 38.0 35.0 40.0 31.0 40.0 31 36.249550798227574 38.0 35.0 40.0 31.0 40.0 32 36.21324495939958 38.0 35.0 40.0 31.0 40.0 33 36.09718791739988 38.0 35.0 40.0 31.0 40.0 34 35.68257203129306 38.0 35.0 40.0 30.0 40.0 35 35.61887415989993 38.0 34.0 40.0 29.0 40.0 36 35.560479254563575 37.0 34.0 40.0 29.0 40.0 37 35.36660827485318 37.0 34.0 40.0 29.0 40.0 38 35.203516229567285 37.0 34.0 40.0 28.0 40.0 39 35.027266150062545 36.0 34.0 40.0 28.0 40.0 40 34.79058981915322 36.0 34.0 40.0 27.0 40.0 41 34.64997773867322 36.0 34.0 40.0 27.0 40.0 42 34.49785867237687 36.0 34.0 40.0 26.0 40.0 43 34.42881278224182 35.0 33.0 40.0 26.0 40.0 44 34.09835398689762 35.0 33.0 40.0 24.0 40.0 45 34.04943207115144 35.0 33.0 39.0 25.0 40.0 46 33.962313428880364 35.0 33.0 39.0 24.0 40.0 47 33.77132317086098 35.0 33.0 39.0 23.0 40.0 48 33.660734729789894 35.0 33.0 39.0 23.0 40.0 49 33.570553830008265 35.0 33.0 39.0 24.0 40.0 50 32.97323737994785 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 1.0 13 3.0 14 14.0 15 34.0 16 54.0 17 149.0 18 275.0 19 546.0 20 842.0 21 1337.0 22 1989.0 23 2689.0 24 3812.0 25 5169.0 26 6619.0 27 9138.0 28 12001.0 29 15063.0 30 17918.0 31 22046.0 32 28674.0 33 42329.0 34 82009.0 35 69007.0 36 80957.0 37 112182.0 38 191196.0 39 48618.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.71692602879132 1.049065024275447 0.16470731655606674 0.06930163037717048 8 98.53671528823118 1.0840471092077089 0.2393092628320648 0.13992833972904786 9 95.9579790955541 1.660058939512795 1.2378887781711791 1.1440731867619311 10 56.704237072529516 29.523687111751862 6.523893824071915 7.248181991646701 11 35.43658702058642 24.87650263955732 20.765047596836773 18.921862743019485 12 31.46373523862022 17.591615960311234 26.917654292195813 24.02699450887273 13 25.220625649288696 16.844536434371488 28.42718426018191 29.507653656157906 14 26.18594568236267 19.463820043674605 29.339898657960013 25.010335616002717 15 26.873661670235542 19.541469671592427 28.36066529565162 25.22420336252041 16 30.962457862488602 20.575031271863804 23.206770623529163 25.255740242118428 17 30.695851972777575 23.190737167935207 21.918661352216592 24.19474950707062 18 30.754817987152034 20.746231475395934 22.190170034134034 26.308780503317998 19 31.707019738376406 22.363490364025694 21.1446827230903 24.784807174507602 20 31.98078105455085 21.73672800898934 22.337783831916383 23.94470710454343 21 32.37485954162868 20.28033370788899 23.801466067377618 23.543340683104713 22 31.08078741492993 19.48859902050162 24.337858036338964 25.092755528229482 23 29.461010876248224 21.6971081476456 24.24059723959548 24.601283736510695 24 28.568702694680603 22.887559098522274 23.646961858926794 24.896776347870333 25 29.90212966692815 22.57749061844086 21.296006742001826 26.22437297262917 26 27.23183051709882 23.363924989929398 21.340661903449444 28.063582589522333 27 27.10886318824602 21.750243814531345 23.339543536794793 27.801349460427843 28 28.386769351453346 22.406952954396083 22.00810418300931 27.198173511141267 29 29.964143362944434 23.198025102296096 22.557746941717728 24.280084593041746 30 29.270729535480317 21.207756482286342 22.38482413551848 27.136689846714862 31 28.77780015688935 22.542376025611127 22.581863379057392 26.09796043844213 32 32.50127207581572 22.325460597451606 21.914156083702586 23.259111243030084 33 32.82260372718214 22.546351262535246 21.568575487099032 23.06246952318358 34 28.866182924502297 23.922710793563297 24.978401212712278 22.232705069222124 35 28.206426102995742 25.98082345707804 23.68737676765535 22.125373672270868 36 29.854426823838704 25.004372760616533 21.56817796340662 23.573022452138147 37 30.041660482964783 26.269955689359087 20.407408781563383 23.280975046112747 38 31.095363283651707 24.764930989886995 21.890172154260394 22.249533572200903 39 29.192814891767547 23.859239510674836 21.930189539296542 25.01775605826107 40 29.093964000254413 23.1641030805436 22.74723323510081 24.994699684101175 41 25.99553183369729 23.651732143235737 23.656767443339625 26.695968579727353 42 26.638592660122544 22.830050671019993 24.27133907180868 26.260017597048783 43 27.711244090147773 20.601267835563 25.999242054826468 25.688246019462763 44 27.539646362923232 20.947908495346322 24.83330506498187 26.679140076748574 45 26.93779549261136 21.29375410774482 24.352168889265798 27.41628151037802 46 27.224940106430346 23.02390972501961 23.626820658511246 26.124329510038795 47 25.731443594038204 24.85185617062777 24.194616999173153 25.222083236160874 48 28.128776475077917 23.6197977399453 23.937154154387603 24.314271630589182 49 27.41058367078678 22.740342824432336 23.93092628320648 25.918147221574404 50 24.83065490703246 24.568421777937964 24.024476858820787 26.576446456208792 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 6.5 10 13.0 11 12.5 12 12.0 13 97.0 14 182.0 15 593.5 16 1005.0 17 1488.0 18 1971.0 19 2625.0 20 3279.0 21 2527.5 22 1776.0 23 1992.0 24 2208.0 25 2190.0 26 2172.0 27 2278.0 28 2384.0 29 2498.0 30 2612.0 31 3119.0 32 3626.0 33 3704.0 34 3782.0 35 5168.5 36 6555.0 37 7211.5 38 7868.0 39 9409.5 40 10951.0 41 11020.0 42 11089.0 43 12793.5 44 14498.0 45 17422.5 46 20347.0 47 20043.5 48 19740.0 49 21638.5 50 23537.0 51 24585.0 52 25633.0 53 27609.5 54 29586.0 55 32521.0 56 35456.0 57 38720.5 58 41985.0 59 44034.5 60 46084.0 61 56667.0 62 67250.0 63 72294.0 64 77338.0 65 75328.0 66 73318.0 67 66171.0 68 59024.0 69 54271.5 70 49519.0 71 42088.0 72 34657.0 73 29606.0 74 24555.0 75 20929.0 76 17303.0 77 14085.0 78 10867.0 79 12266.0 80 13665.0 81 9720.0 82 5775.0 83 3834.5 84 1894.0 85 1359.0 86 824.0 87 521.5 88 219.0 89 134.0 90 49.0 91 40.0 92 31.0 93 25.5 94 20.0 95 14.0 96 8.0 97 6.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 754672.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.588345665401658 #Duplication Level Percentage of deduplicated Percentage of total 1 70.89098268804172 8.215092119490322 2 8.852653966656757 2.0517522844361524 3 3.1902485878290303 1.109091101829669 4 1.5951242939145152 0.739394067886446 5 0.8793194136345964 0.5094928657748002 6 0.5980286779335422 0.4158097822630229 7 0.44366181078052463 0.35989144953039204 8 0.378484689093695 0.3508809125023851 9 0.3178814005076955 0.3315347594716645 >10 8.339241201088573 27.64777280725931 >50 3.2085439202323505 25.378045031483875 >100 1.2452260617010085 24.49434986325185 >500 0.037734123081848744 2.894900036042148 >1k 0.021725707228943215 4.729206860728899 >5k 0.0011434582752075377 0.7727860580490598 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5832 0.7727860580490598 No Hit CGGCAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 4953 0.6563116161723239 No Hit CGGCAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3865 0.5121430237242139 No Hit CGGCAGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 3775 0.5002173129518519 No Hit CGGCAGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 2766 0.3665168444039265 No Hit CGGCAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2026 0.2684610002756164 No Hit CGGCAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1965 0.2603780185299044 No Hit CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1592 0.2109525727733373 No Hit CGGCAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 1586 0.21015752538851318 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1430 0.18948629338308565 No Hit CGGCAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 1300 0.17226026671189604 No Hit CGGCAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1285 0.17027264824983568 No Hit CGGCAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1281 0.1697426166599529 No Hit CGGCAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 1193 0.15808192168253227 No Hit CGGCAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1181 0.15649182691288402 No Hit CGGCAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1172 0.1552992558356478 No Hit CGGCAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1126 0.1492038925519961 No Hit CGGCAGGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1106 0.1465537346025823 No Hit CGGCAGGGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAA 1049 0.13900078444675304 No Hit CGGCAGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 1039 0.13767570547204613 No Hit CGGCAGGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 963 0.12760510526427374 No Hit CGGCAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 928 0.12296732885279964 No Hit CGGCAGGGGGGGGCTGACGAGATGGCTCAGTGGGTAAGAGCACTGACTGC 912 0.12084720249326861 No Hit CGGCAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 908 0.12031717090338584 No Hit CGGCAGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 820 0.10865647592596518 No Hit CGGCAGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 807 0.10693387325884623 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCT 788 0.10441622320690312 No Hit CGGCAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 780 0.10335616002713761 No Hit CGGCAGGGGGCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 774 0.10256111264231348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0837449912014756 0.0 0.0 0.0 0.0 6 0.0837449912014756 0.0 0.0 0.0 0.0 7 0.08639514915088939 0.0 0.0 0.0 0.0 8 0.09885089151313418 0.0 0.0 0.0 0.0 9 0.10295863633472555 0.0 0.0 0.0 0.0 10 0.13873576865181164 0.0 0.0 0.0 0.0 11 0.1627196980940064 0.0 0.0 0.0 0.0 12 0.1786206457904891 0.0 0.0 0.0 0.0 13 0.19187143553755803 0.0 0.0 0.0 0.0 14 0.21294019123539762 0.0 0.0 0.0 0.0 15 0.22910615472682172 0.0 0.0 0.0 0.0 16 0.24739224457777684 0.0 0.0 0.0 0.0 17 0.26448576335149576 0.0 0.0 0.0 0.0 18 0.27826658468844745 0.0 0.0 0.0 0.0 19 0.2997328640786991 0.0 0.0 0.0 0.0 20 0.3143087328004749 0.0 0.0 0.0 0.0 21 0.3341849174210783 0.0 0.0 0.0 0.0 22 0.3508809125023851 0.0 0.0 0.0 0.0 23 0.37314223927746093 0.0 0.0 0.0 0.0 24 0.3939459791803592 0.0 0.0 0.0 0.0 25 0.4102444505692539 0.0 0.0 0.0 0.0 26 0.4287955562151504 0.0 0.0 0.0 0.0 27 0.4464191065787521 0.0 0.0 0.0 0.0 28 0.47278817817541924 0.0 0.0 0.0 0.0 29 0.48749655479466575 0.0 0.0 0.0 0.0 30 0.5052526130557381 0.0 0.0 0.0 0.0 31 0.5228761634193398 0.0 0.0 0.0 0.0 32 0.5434148875272966 0.0 0.0 0.0 0.0 33 0.5582557720440138 0.0 0.0 0.0 0.0 34 0.5765418618949689 0.0 0.0 0.0 0.0 35 0.5999957597472809 0.0 0.0 0.0 0.0 36 0.6162942311361758 0.0 0.0 0.0 0.0 37 0.6323276867301291 0.0 0.0 0.0 0.0 38 0.6458434922721394 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 20 7.854761E-4 44.0 42 ATTTACG 30 2.526558E-6 44.0 36 GATAATC 20 7.854761E-4 44.0 10 CATATCA 20 7.854761E-4 44.0 20 CGACGTA 20 7.854761E-4 44.0 34 TTCGTTA 20 7.854761E-4 44.0 41 ATTCGTT 30 2.526558E-6 44.0 33 TTGTACG 25 4.441382E-5 44.0 39 CGATTGG 25 4.441382E-5 44.0 23 TAACGTC 45 4.802132E-10 44.0 24 CGATTGA 20 7.854761E-4 44.0 35 CACGACC 30 2.526558E-6 44.0 13 TATGCGG 20 7.854761E-4 44.0 19 TTATCGA 30 2.526558E-6 44.0 14 ATCGTTT 20 7.854761E-4 44.0 31 CGTTAGT 20 7.854761E-4 44.0 43 AAACGAC 20 7.854761E-4 44.0 36 CCGTAAC 25 4.441382E-5 44.0 43 TTAAGCG 20 7.854761E-4 44.0 23 ACAATCG 20 7.854761E-4 44.0 28 >>END_MODULE