##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527790_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1163420 Sequences flagged as poor quality 0 Sequence length 52 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17525571160888 33.0 31.0 34.0 31.0 34.0 2 32.508899623523746 34.0 31.0 34.0 31.0 34.0 3 32.82974592150728 34.0 31.0 34.0 31.0 34.0 4 36.227057296591084 37.0 37.0 37.0 35.0 37.0 5 36.009972322978804 37.0 35.0 37.0 35.0 37.0 6 36.010531880146466 37.0 35.0 37.0 35.0 37.0 7 36.49747468669956 37.0 37.0 37.0 35.0 37.0 8 36.5683562256107 37.0 37.0 37.0 35.0 37.0 9 38.564741022158806 39.0 39.0 39.0 37.0 39.0 10 37.800062746041846 39.0 38.0 39.0 35.0 39.0 11 36.55541249076 38.0 35.0 39.0 33.0 39.0 12 36.29194100152997 39.0 35.0 39.0 32.0 39.0 13 36.02943391036771 38.0 35.0 39.0 31.0 39.0 14 36.863588385965514 39.0 35.0 40.0 32.0 40.0 15 37.03745680837531 39.0 35.0 40.0 32.0 40.0 16 37.176518368259096 39.0 35.0 40.0 33.0 40.0 17 37.17876948995204 39.0 35.0 40.0 33.0 40.0 18 37.17198174348043 39.0 35.0 40.0 33.0 40.0 19 37.09723745508931 39.0 35.0 40.0 33.0 40.0 20 37.028491000670435 39.0 35.0 40.0 32.0 40.0 21 37.0265836929054 39.0 35.0 40.0 32.0 40.0 22 36.87517319626618 39.0 35.0 40.0 32.0 40.0 23 36.69996905674649 39.0 35.0 40.0 32.0 40.0 24 36.597956026198624 38.0 35.0 40.0 31.0 40.0 25 36.53523920854034 38.0 35.0 40.0 31.0 40.0 26 36.34442763576352 38.0 35.0 40.0 31.0 40.0 27 36.27311546990769 38.0 35.0 40.0 31.0 40.0 28 36.162333465128675 38.0 35.0 40.0 31.0 40.0 29 36.02559264925822 38.0 35.0 40.0 31.0 40.0 30 35.87777844630486 38.0 35.0 40.0 30.0 40.0 31 35.713847105946265 38.0 34.0 40.0 30.0 40.0 32 35.58132058929707 38.0 34.0 40.0 30.0 40.0 33 35.26116020009971 37.0 34.0 40.0 28.0 40.0 34 35.10241615237833 37.0 34.0 40.0 27.0 40.0 35 35.017109040587236 37.0 33.0 40.0 28.0 40.0 36 34.83569218339035 36.0 33.0 40.0 27.0 40.0 37 34.74253665916006 36.0 33.0 40.0 27.0 40.0 38 34.30325333929277 36.0 33.0 40.0 26.0 40.0 39 34.31313197297622 35.0 33.0 39.0 26.0 40.0 40 34.106651939970085 35.0 33.0 39.0 25.0 40.0 41 33.77520070138041 35.0 33.0 39.0 23.0 40.0 42 33.76067198432209 35.0 33.0 39.0 24.0 40.0 43 33.75362122019563 35.0 33.0 39.0 24.0 40.0 44 33.60100135806501 35.0 33.0 39.0 24.0 40.0 45 33.46967733062866 35.0 32.0 38.0 23.0 40.0 46 33.19530608034931 35.0 32.0 38.0 23.0 40.0 47 32.85781918825531 35.0 31.0 38.0 23.0 40.0 48 32.78474239741452 35.0 31.0 38.0 23.0 40.0 49 32.71288786508742 35.0 31.0 37.0 23.0 40.0 50 32.57142648398687 35.0 31.0 37.0 23.0 40.0 51 32.98752041395197 35.0 32.0 37.0 24.0 40.0 52 32.8334754430902 35.0 32.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 6.0 15 23.0 16 98.0 17 215.0 18 495.0 19 921.0 20 1419.0 21 2399.0 22 3477.0 23 5178.0 24 7013.0 25 9653.0 26 12395.0 27 16340.0 28 19976.0 29 25420.0 30 31581.0 31 40730.0 32 52544.0 33 78271.0 34 130331.0 35 112187.0 36 137630.0 37 180813.0 38 241971.0 39 52328.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.89085626858744 0.9226246755256056 0.13460315277371887 0.05191590311323512 8 98.63376940399856 1.0255109934503448 0.2193532860016159 0.12136631654948342 9 96.03891973663853 1.6491894586649705 1.2107407471076654 1.1011500575888329 10 56.59521067198432 29.542469615444123 6.48020491310103 7.382114799470527 11 35.26078286431383 24.88026679960805 20.891337608086506 18.96761272799161 12 31.425624452046552 17.53201767203589 26.840865723470458 24.201492152447095 13 25.608206838459026 16.66835708514552 28.337315844664868 29.38612023173059 14 26.322222413229962 19.30197177287652 29.230716336318785 25.14508947757474 15 26.980368224716784 19.382853999415516 28.211995667944507 25.424782107923193 16 30.91643602482337 20.502827869557 23.359663749978512 25.221072355641127 17 30.83916384452734 23.077134654724862 21.962146086537963 24.12155541420983 18 30.906981141806057 20.620154372453626 22.19542383661962 26.2774406491207 19 31.773736054047554 22.25498959962868 21.20059823623455 24.77067611008922 20 32.21347406783448 21.66655206202403 22.175052861391414 23.944921008750065 21 32.49712055835382 20.22511216929398 23.82862594763714 23.449141324715065 22 31.164927541214695 19.39574702171185 24.330250468446476 25.109074968626977 23 29.436059204758386 21.62546629763972 24.328531398806966 24.609943098794933 24 28.455587835863234 22.70383868250503 23.884753571367177 24.955819910264566 25 29.931752935311412 22.440133399804026 21.353853294596963 26.2742603702876 26 27.119870725963107 23.158962369565593 21.6149799728387 28.1061869316326 27 27.01199910608379 21.63973457564766 23.47148923002871 27.876777088239844 28 28.265114919805402 22.245792577057298 22.136889515394266 27.352202987743034 29 29.97060390916436 23.040002750511423 22.522390882054633 24.467002458269587 30 29.382080418077738 21.089546337522133 22.294270340891508 27.23410290350862 31 28.908734592838353 22.38495126437572 22.579034226676523 26.1272799161094 32 32.504168743875816 22.284041876536417 21.922951298757113 23.288838080830654 33 32.80724072132163 22.4205360059136 21.524986677210293 23.247236595554487 34 28.7879699506627 23.725223908820546 25.098502690343988 22.388303450172767 35 28.291588592253873 25.630726650736623 23.796221484932353 22.28146327207715 36 30.013064929260285 24.831874989255816 21.55541420982964 23.59964587165426 37 30.003352185797045 26.195355073834044 20.423664712657512 23.377628027711403 38 31.23076790840797 24.59533100685909 21.893984975331353 22.279916109401594 39 29.112788159048325 23.712846607416065 22.01655464062849 25.157810592907122 40 29.09989513675199 22.972873081088515 22.87333894896082 25.05389283319867 41 26.291537020164686 23.38235546922006 23.720668374275842 26.605439136339413 42 26.597617369479636 22.666191057399736 24.29191521548538 26.44427635763525 43 27.67633356827285 20.4370734558457 26.07639545477987 25.81019752110158 44 27.444087259974904 20.813033986006772 24.873218614086056 26.869660139932268 45 26.871465163053752 21.226126420381288 24.365921163466332 27.536487253098624 46 27.281635179041103 22.729366866651766 23.750408279039384 26.238589675267743 47 26.07639545477987 24.606247099069982 24.153702016468685 25.16365542968146 48 28.301129428753157 23.385707655017104 23.98291244778326 24.330250468446476 49 27.5207577658971 22.622612642038128 24.00551821354283 25.851111378521946 50 24.85001117395266 24.374516511663888 24.18395764212408 26.591514672259375 51 25.571074934245587 23.61821182376098 23.753244743944578 27.057468498048852 52 27.8934520637431 23.317460590328515 24.04402537346788 24.745061972460505 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 13.0 10 26.0 11 24.5 12 23.0 13 144.5 14 822.5 15 1379.0 16 2020.5 17 2662.0 18 3543.0 19 4424.0 20 3541.0 21 2658.0 22 2806.5 23 2955.0 24 2857.0 25 2759.0 26 2724.0 27 2689.0 28 3011.5 29 3334.0 30 3680.0 31 4026.0 32 4700.0 33 5374.0 34 6433.5 35 7493.0 36 8298.5 37 9104.0 38 11137.0 39 15657.0 40 18144.0 41 18599.0 42 19054.0 43 20932.0 44 22810.0 45 25885.5 46 28961.0 47 29611.5 48 30262.0 49 32469.0 50 34676.0 51 37236.5 52 39797.0 53 41167.5 54 42538.0 55 47412.5 56 52287.0 57 58344.0 58 64401.0 59 67667.0 60 70933.0 61 82649.5 62 94366.0 63 105512.5 64 111880.0 65 107101.0 66 100704.5 67 94308.0 68 84843.0 69 75378.0 70 67988.5 71 60599.0 72 50298.5 73 39998.0 74 34384.5 75 28771.0 76 25117.0 77 21463.0 78 20833.5 79 20204.0 80 16113.0 81 12022.0 82 7822.5 83 3623.0 84 2678.5 85 1734.0 86 1213.5 87 693.0 88 427.0 89 109.0 90 57.0 91 44.0 92 31.0 93 25.0 94 19.0 95 17.0 96 15.0 97 14.0 98 13.0 99 6.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1163420.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.757405204357172 #Duplication Level Percentage of deduplicated Percentage of total 1 74.83301978475284 9.54675156059769 2 9.19666034081686 2.346510449892844 3 3.5242228475630126 1.3487981669044447 4 1.736300259109294 0.8860274384755045 5 0.9111490331731361 0.5811948708873984 6 0.5490995078725134 0.4203050951665658 7 0.3826393751849921 0.3417039889463896 8 0.2657331852450867 0.27120527363328617 9 0.21181771788401474 0.24320200108577297 >10 3.953998252533654 14.308661430630188 >50 2.8584034392446336 26.04308647246338 >100 1.5081857117500865 33.08121382675498 >500 0.047662753870205896 4.130938789256162 >1k 0.018384205064222274 4.029741386415649 >5k 0.002723585935440337 2.420659248889761 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9016 0.7749565934916024 No Hit CGGCAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 7825 0.6725859964587165 No Hit CGGCAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5526 0.474978941396916 No Hit CGGCAGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 5500 0.4727441508655516 No Hit CGGCAGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 4074 0.35017448556841035 No Hit CGGCAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3298 0.2834745835553798 No Hit CGGCAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2793 0.24006807515772463 No Hit CGGCAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 2316 0.19906826425538496 No Hit CGGCAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2165 0.1860892884770762 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1980 0.17018789431159856 No Hit CGGCAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1930 0.16589022021282082 No Hit CGGCAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1894 0.16279589486170085 No Hit CGGCAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 1745 0.14998882604734318 No Hit CGGCAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1668 0.14337040793522546 No Hit CGGCAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1659 0.14259682659744546 No Hit CGGCAGGGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGA 1649 0.1417372917776899 No Hit CGGCAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1600 0.13752557116088773 No Hit CGGCAGGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1479 0.1271251998418456 No Hit CGGCAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1468 0.12617971154011448 No Hit CGGCAGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 1437 0.12351515359887229 No Hit CGGCAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1394 0.11981915387392343 No Hit CGGCAGGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1362 0.1170686424507057 No Hit CGGCAGGGGGGGGCTGACGAGATGGCTCAGTGGGTAAGAGCACTGACTGCTC 1286 0.11053617782056352 No Hit CGGCAGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 1272 0.10933282907290573 No Hit CGGCAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1255 0.10787161987932131 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT 1209 0.10391775970844579 No Hit CGGCAGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1190 0.10228464355091026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.06936445995427275 0.0 0.0 0.0 0.0 6 0.06936445995427275 0.0 0.0 0.0 0.0 7 0.07159925048563717 0.0 0.0 0.0 0.0 8 0.08251534269653264 0.0 0.0 0.0 0.0 9 0.08750064465111482 0.0 0.0 0.0 0.0 10 0.1211944095855323 0.0 0.0 0.0 0.0 11 0.14130752436781213 0.0 0.0 0.0 0.0 12 0.15170789568685428 0.0 0.0 0.0 0.0 13 0.16219422048787197 0.0 0.0 0.0 0.0 14 0.18161970741434735 0.0 0.0 0.0 0.0 15 0.19726324113389834 0.0 0.0 0.0 0.0 16 0.21453989101098486 0.0 0.0 0.0 0.0 17 0.2342232383833869 0.0 0.0 0.0 0.0 18 0.24771793505354903 0.0 0.0 0.0 0.0 19 0.26877653813756 0.0 0.0 0.0 0.0 20 0.285365560158842 0.0 0.0 0.0 0.0 21 0.30049337298653966 0.0 0.0 0.0 0.0 22 0.31656667411596845 0.0 0.0 0.0 0.0 23 0.3371955097901016 0.0 0.0 0.0 0.0 24 0.3561052758247237 0.0 0.0 0.0 0.0 25 0.37174880954427464 0.0 0.0 0.0 0.0 26 0.38782211067370337 0.0 0.0 0.0 0.0 27 0.40123085386188995 0.0 0.0 0.0 0.0 28 0.42151587560812087 0.0 0.0 0.0 0.0 29 0.4332915026387719 0.0 0.0 0.0 0.0 30 0.4477316876106651 0.0 0.0 0.0 0.0 31 0.4599370820511939 0.0 0.0 0.0 0.0 32 0.4768699180003782 0.0 0.0 0.0 0.0 33 0.48933317288683364 0.0 0.0 0.0 0.0 34 0.5036874043767513 0.0 0.0 0.0 0.0 35 0.5255195887985422 0.0 0.0 0.0 0.0 36 0.5374671227931443 0.0 0.0 0.0 0.0 37 0.5519932612470131 0.0 0.0 0.0 0.0 38 0.5649722370253218 0.0 0.0 0.0 0.0 39 0.576919771019924 0.0 0.0 0.0 0.0 40 0.5878358632308195 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 20 6.3114864E-4 46.0 32 AGCGTAA 20 6.3114864E-4 46.0 25 CATATCG 20 6.3114864E-4 46.0 46 CGAAAGG 20 6.3114864E-4 46.0 30 TAGGTCG 25 3.4171826E-5 46.0 26 CCGCTTA 20 6.3114864E-4 46.0 11 TTATCGG 25 3.4171826E-5 46.0 17 TCGATAT 20 6.3114864E-4 46.0 42 GTAGACG 25 3.4171826E-5 46.0 10 TACGACA 20 6.3114864E-4 46.0 33 CACTAAT 25 3.4171826E-5 46.0 30 GTCGTAA 25 3.4171826E-5 46.0 15 TTAACGG 40 5.6115823E-9 46.0 13 CGATGAT 30 1.8614228E-6 46.0 30 CGCAAAC 25 3.4171826E-5 46.0 35 AATACGA 20 6.3114864E-4 46.0 34 ATATTCG 20 6.3114864E-4 46.0 43 TTGTACG 35 1.01957994E-7 45.999996 39 TACGTTC 35 1.01957994E-7 45.999996 35 TGCGTCG 235 0.0 45.02128 39 >>END_MODULE