##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527784_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2063116 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.227726894658375 33.0 31.0 34.0 31.0 34.0 2 32.24621155572445 33.0 31.0 34.0 31.0 34.0 3 32.768202563501035 34.0 31.0 34.0 31.0 34.0 4 36.31645918116092 37.0 37.0 37.0 35.0 37.0 5 35.81653770316356 37.0 35.0 37.0 35.0 37.0 6 36.15026736257195 37.0 36.0 37.0 35.0 37.0 7 36.48349341481526 37.0 37.0 37.0 35.0 37.0 8 36.626996736974554 37.0 37.0 37.0 35.0 37.0 9 38.664649976055635 39.0 39.0 39.0 38.0 39.0 10 38.05700503510224 39.0 38.0 39.0 37.0 39.0 11 37.78623645010751 39.0 38.0 39.0 35.0 39.0 12 37.198137671367 39.0 37.0 39.0 34.0 39.0 13 36.92297088481695 39.0 37.0 39.0 33.0 39.0 14 37.84040499904029 40.0 37.0 40.0 33.0 40.0 15 37.87871743518057 40.0 37.0 40.0 33.0 40.0 16 37.93738403463499 40.0 37.0 40.0 34.0 40.0 17 37.89763445196489 40.0 37.0 40.0 34.0 40.0 18 37.875783038859666 40.0 37.0 40.0 34.0 40.0 19 37.820969833979284 40.0 37.0 40.0 34.0 40.0 20 37.83566023432517 40.0 37.0 40.0 34.0 40.0 21 37.86096564613914 40.0 37.0 40.0 34.0 40.0 22 37.74559161966656 40.0 37.0 40.0 33.0 40.0 23 37.752174380887936 40.0 37.0 40.0 34.0 40.0 24 37.71283631167613 40.0 37.0 40.0 34.0 40.0 25 37.69384271170404 40.0 36.0 40.0 34.0 40.0 26 37.51199108532918 40.0 36.0 40.0 33.0 40.0 27 37.436087452183976 40.0 36.0 40.0 33.0 40.0 28 37.35235827747931 40.0 36.0 40.0 33.0 40.0 29 37.30758134782533 40.0 35.0 40.0 33.0 40.0 30 37.15306361833266 40.0 35.0 40.0 32.0 40.0 31 37.07053602414988 39.0 35.0 40.0 32.0 40.0 32 36.970864459390555 39.0 35.0 40.0 32.0 40.0 33 36.70403942386177 39.0 35.0 40.0 31.0 40.0 34 36.65291384488318 39.0 35.0 40.0 31.0 40.0 35 36.52593067961278 39.0 35.0 40.0 31.0 40.0 36 36.41647827848749 39.0 35.0 40.0 31.0 40.0 37 36.45487796129738 39.0 35.0 40.0 31.0 40.0 38 36.11959724998498 38.0 35.0 40.0 30.0 40.0 39 36.18976732282625 38.0 35.0 40.0 30.0 40.0 40 36.037979444684645 38.0 35.0 40.0 30.0 40.0 41 35.72701922722717 38.0 35.0 40.0 30.0 40.0 42 35.772146112966986 38.0 35.0 40.0 30.0 40.0 43 35.78371647546721 38.0 35.0 40.0 30.0 40.0 44 35.611213814443786 38.0 34.0 40.0 29.0 40.0 45 35.50485430775584 38.0 34.0 40.0 29.0 40.0 46 35.15965025718379 37.0 34.0 40.0 28.0 40.0 47 34.91480168832 37.0 34.0 40.0 27.0 40.0 48 34.90127312279096 37.0 33.0 40.0 27.0 40.0 49 34.82031887688331 36.0 33.0 40.0 27.0 40.0 50 34.65231378167781 36.0 33.0 40.0 27.0 40.0 51 35.0327834208062 36.0 34.0 40.0 28.0 40.0 52 34.77120191012042 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 5.0 14 3.0 15 5.0 16 47.0 17 136.0 18 265.0 19 540.0 20 1022.0 21 1697.0 22 2786.0 23 4382.0 24 6221.0 25 8735.0 26 12158.0 27 16296.0 28 21676.0 29 28523.0 30 36015.0 31 45899.0 32 59510.0 33 86080.0 34 163385.0 35 166270.0 36 198830.0 37 318709.0 38 619233.0 39 264687.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.3033838136101 0.5525137704326853 0.06645288001256353 0.07764953594465847 8 99.33455026280636 0.533852677212527 0.08836148815674931 0.04323557182436664 9 97.91073308529428 1.19692736617815 0.4347792368436869 0.4575603116838801 10 58.55933452118058 30.457909298362285 4.601534765859021 6.381221414598112 11 36.839033772216396 24.65343684019706 20.94235127835759 17.565178109228953 12 32.804117655042184 16.564264927420467 26.56632007119328 24.065297346344074 13 26.981905040724808 17.234270879582148 28.441735704633185 27.34208837505986 14 25.80548064190283 18.297759311643166 29.945286644085932 25.95147340236807 15 26.262410838750704 17.854352348583404 29.353221050100913 26.53001576256497 16 31.177258089220384 19.04992254434554 26.3679793089676 23.404840057466473 17 30.770349316276935 19.38228388515236 23.937141682774985 25.910225115795722 18 29.48462422859403 19.464586576809058 24.82763935716654 26.22314983743037 19 29.317013682216608 21.16962885266752 24.23823963364154 25.27511783147433 20 30.674087157484113 21.03667462227039 23.573613892771906 24.71562432747359 21 30.274448940340726 21.41857268326163 24.30212358393808 24.00485479245956 22 30.05531438852687 20.483724618489703 24.36688000093063 25.0940809920528 23 29.963996207678097 21.50489841579436 24.70403990856549 23.827065467962054 24 30.031224613642664 20.08699462366634 24.125739900228584 25.75604086246241 25 29.227149612527846 21.022666684762275 22.768617954589075 26.981565748120808 26 28.58147578711037 20.82907601899263 23.871318917598426 26.71812927629857 27 26.97056297367671 19.06761423012569 24.078723639388187 29.883099156809408 28 28.19778432235512 22.35109417017754 22.659317265728152 26.791804241739193 29 30.263397695524635 21.222413087775966 22.046021648806953 26.468167567892447 30 28.729213480967626 20.901296873273242 23.546809777055678 26.82267986870346 31 30.76579310130889 21.583032655459025 22.44784103269036 25.20333321054172 32 32.4883816518315 20.86000011632889 22.997010347455017 23.65460788438459 33 33.34179949164274 20.264832418535846 22.580068207507477 23.813299882313938 34 30.26412475110464 21.946075741742103 24.932093008827426 22.857706498325832 35 28.302431855504008 23.90941662999075 26.097272281345308 21.690879233159936 36 28.50130579182169 24.765112577286008 23.2781385050574 23.4554431258349 37 29.282018073632308 25.438899218463725 21.860428594417378 23.41865411348659 38 31.059184263027383 25.336772144658852 21.372283478001236 22.231760114312525 39 30.782321498161036 23.211637154672836 21.608382660015238 24.39765868715089 40 28.121831249430475 23.630178816896382 22.03671533738287 26.211274596290274 41 27.04525581692934 23.34764501850599 22.8655102282179 26.741588936346766 42 25.918416608663787 22.99773740303502 22.91034532231828 28.17350066598291 43 25.864275203139332 21.468739518282053 24.560034433352268 28.106950845226347 44 25.957532198868122 21.32895096543287 24.17236839809298 28.54114843760603 45 27.224159959982863 21.197644727683755 23.758867654557474 27.819327657775904 46 28.040740317073787 22.884995317762062 23.165638771644446 25.90862559351971 47 27.56980218271779 22.748260398348904 23.51278357591139 26.169153843021913 48 27.45211611950079 22.132783614687686 24.84455551699468 25.570544748816836 49 28.07665686272609 21.507903578858386 24.33013945895432 26.085300099461207 50 26.37515292402366 22.008844873482637 25.625170858061303 25.9908313444324 51 25.672671822621705 22.199381905816253 25.056855746356483 27.071090525205566 52 25.932133723939906 22.333111662165383 25.08477468062872 26.649979933265993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 10.0 5 9.5 6 9.0 7 35.5 8 62.0 9 320.5 10 579.0 11 1697.5 12 2816.0 13 3454.5 14 3687.0 15 3281.0 16 3410.5 17 3540.0 18 3839.0 19 4138.0 20 3916.5 21 3695.0 22 4304.0 23 4913.0 24 6301.5 25 7690.0 26 8423.5 27 9157.0 28 11515.0 29 13873.0 30 16512.0 31 19151.0 32 21118.0 33 23085.0 34 24783.0 35 26481.0 36 30944.5 37 35408.0 38 38182.5 39 43905.0 40 46853.0 41 52731.5 42 58610.0 43 63480.5 44 68351.0 45 70881.5 46 73412.0 47 78985.5 48 84559.0 49 88834.0 50 93109.0 51 102834.5 52 112560.0 53 120653.0 54 128746.0 55 141540.0 56 154334.0 57 169764.0 58 185194.0 59 188486.0 60 191778.0 61 186389.0 62 181000.0 63 159862.0 64 127513.5 65 116303.0 66 93033.5 67 69764.0 68 61088.0 69 52412.0 70 46024.5 71 39637.0 72 37354.0 73 35071.0 74 26250.0 75 17429.0 76 11839.0 77 6249.0 78 4874.0 79 3499.0 80 2541.0 81 1583.0 82 1124.0 83 665.0 84 435.0 85 205.0 86 138.5 87 72.0 88 55.5 89 29.5 90 20.0 91 10.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2063116.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.274103177379672 #Duplication Level Percentage of deduplicated Percentage of total 1 66.75257333354749 5.523176791173748 2 9.931034553761819 1.6434080911189597 3 4.226048856431757 1.0490029281229118 4 2.2636713885457938 0.7491940251404081 5 1.2792842865899898 0.5292465090223061 6 0.7668121400622533 0.3806809658725438 7 0.5393998363568393 0.312413492991474 8 0.41987913420548206 0.2779298622756004 9 0.30419589801961944 0.22652534217149964 >10 6.328602819729409 15.026645545734821 >50 4.636393802097922 27.259523622909892 >100 2.4342295319542187 34.7030826417646 >500 0.07981080432636783 4.333554873972189 >1k 0.03438003878674306 4.9629822449254 >5k 0.002455717056195933 1.6045800818069593 >10k+ 0.0012278585280979665 1.4180529809966782 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 14183 0.6874552860818296 No Hit CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 13733 0.6656436186816447 No Hit CATGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9179 0.44490954459177284 No Hit CATGATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9028 0.43759051841971075 No Hit CATGATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7848 0.38039547945922575 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 5533 0.2681865682782742 No Hit CATGATGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 4948 0.23983140065803377 No Hit CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 4422 0.21433598498581757 No Hit CATGATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3832 0.18573846550557507 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3610 0.1749780429214838 No Hit CATGATGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 2770 0.13426293044113854 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 2633 0.12762248947708224 No Hit CATGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 2479 0.12015805218901893 No Hit CATGATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2394 0.116038070568984 No Hit CATGATGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 2359 0.11434160754896963 No Hit CATGATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 2178 0.10556847021689522 No Hit CATGATGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 2070 0.10033367004085084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.037709949416319784 0.0 0.0 0.0 0.0 8 0.05481999073246487 0.0 0.0 0.0 0.0 9 0.06281760211253269 0.0 0.0 0.0 0.0 10 0.08991254006076246 0.0 0.0 0.0 0.0 11 0.10571388133289646 0.0 0.0 0.0 0.0 12 0.11521407424497701 0.0 0.0 0.0 0.0 13 0.12340556711304648 0.0 0.0 0.0 0.0 14 0.13348740448913196 0.0 0.0 0.0 0.0 15 0.14250289368120841 0.0 0.0 0.0 0.0 16 0.15355413849730215 0.0 0.0 0.0 0.0 17 0.16378138698938888 0.0 0.0 0.0 0.0 18 0.17376628362147353 0.0 0.0 0.0 0.0 19 0.18738645815358904 0.0 0.0 0.0 0.0 20 0.19843770296968274 0.0 0.0 0.0 0.0 21 0.20856801071776865 0.0 0.0 0.0 0.0 22 0.21918302218585867 0.0 0.0 0.0 0.0 23 0.23130061518596143 0.0 0.0 0.0 0.0 24 0.2439513822780687 0.0 0.0 0.0 0.0 25 0.2540816900261546 0.0 0.0 0.0 0.0 26 0.26862280162627794 0.0 0.0 0.0 0.0 27 0.27923781309436796 0.0 0.0 0.0 0.0 28 0.2971233803625196 0.0 0.0 0.0 0.0 29 0.3071082769946043 0.0 0.0 0.0 0.0 30 0.3200013959467136 0.0 0.0 0.0 0.0 31 0.3295500592307946 0.0 0.0 0.0 0.0 32 0.3422492966949023 0.0 0.0 0.0 0.0 33 0.3525734859309898 0.0 0.0 0.0 0.0 34 0.3651273122790963 0.0 0.0 0.0 0.0 35 0.38344911289525163 0.0 0.0 0.0 0.0 36 0.3982810467273774 0.0 0.0 0.0 0.0 37 0.4118042805154921 0.0 0.0 0.0 0.0 38 0.4223708216115817 0.0 0.0 0.0 0.0 39 0.4341491220076816 0.0 0.0 0.0 0.0 40 0.44592742240378147 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGT 35 1.02010745E-7 46.000004 30 ATACGCA 35 1.02010745E-7 46.000004 10 TAATACG 20 6.312627E-4 46.0 18 ATAGCGT 20 6.312627E-4 46.0 31 TACGAAC 25 3.4181074E-5 46.0 16 TATCGGC 30 1.8621286E-6 46.0 42 CATGATG 212980 0.0 44.235416 1 ATGATGG 211910 0.0 44.188522 2 TGATGGG 208025 0.0 44.13258 3 ATGGGAT 20655 0.0 44.040184 5 GATGGGA 63805 0.0 43.927277 4 GATGGGG 123865 0.0 43.91846 4 ATGGGGG 50110 0.0 43.851925 5 ATGGGGT 17170 0.0 43.655792 5 ATGGGGA 33885 0.0 43.61074 5 ATGGGAC 11375 0.0 43.47253 5 ATGGGAG 20300 0.0 43.371426 5 ATGGGGC 23500 0.0 43.20085 5 CACGTCA 75 0.0 42.93333 46 TGGGGGG 24255 0.0 42.633686 6 >>END_MODULE