##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527778_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1733593 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42850426830288 33.0 31.0 34.0 31.0 34.0 2 32.74070153721202 34.0 31.0 34.0 31.0 34.0 3 32.826863629467816 34.0 31.0 34.0 31.0 34.0 4 36.216223185026706 37.0 37.0 37.0 35.0 37.0 5 36.12704019917016 37.0 37.0 37.0 35.0 37.0 6 36.2328481944724 37.0 37.0 37.0 35.0 37.0 7 36.52763422556505 37.0 37.0 37.0 35.0 37.0 8 36.643022900992335 37.0 37.0 37.0 35.0 37.0 9 38.667286958357586 39.0 39.0 39.0 38.0 39.0 10 38.04121555636185 39.0 38.0 39.0 37.0 39.0 11 37.80822719058049 39.0 38.0 39.0 35.0 39.0 12 37.41360226996763 39.0 37.0 39.0 35.0 39.0 13 37.14059124604218 39.0 37.0 39.0 34.0 39.0 14 38.056167162650056 40.0 38.0 40.0 34.0 40.0 15 38.15051052928801 40.0 38.0 40.0 34.0 40.0 16 38.23686528498904 40.0 38.0 40.0 34.0 40.0 17 38.24468084492727 40.0 38.0 40.0 35.0 40.0 18 38.23603060233861 40.0 38.0 40.0 34.0 40.0 19 38.19292417539757 40.0 38.0 40.0 34.0 40.0 20 38.15951494958736 40.0 38.0 40.0 34.0 40.0 21 38.192305806495526 40.0 38.0 40.0 34.0 40.0 22 38.07185423568277 40.0 38.0 40.0 34.0 40.0 23 38.07634606277252 40.0 38.0 40.0 34.0 40.0 24 38.073460148950765 40.0 38.0 40.0 34.0 40.0 25 38.00763847108289 40.0 38.0 40.0 34.0 40.0 26 37.846308216519105 40.0 38.0 40.0 34.0 40.0 27 37.74657488810811 40.0 37.0 40.0 34.0 40.0 28 37.66176432415221 40.0 37.0 40.0 33.0 40.0 29 37.59783063268022 40.0 37.0 40.0 33.0 40.0 30 37.51525761813759 40.0 37.0 40.0 33.0 40.0 31 37.42406377967608 40.0 36.0 40.0 33.0 40.0 32 37.34029152171242 40.0 36.0 40.0 33.0 40.0 33 37.140706036537985 40.0 36.0 40.0 32.0 40.0 34 37.10887445899932 40.0 36.0 40.0 32.0 40.0 35 37.06105931438348 40.0 36.0 40.0 32.0 40.0 36 36.87716609377172 39.0 35.0 40.0 32.0 40.0 37 36.84636936120531 39.0 35.0 40.0 31.0 40.0 38 36.52970045448961 39.0 35.0 40.0 31.0 40.0 39 36.599295220965935 39.0 35.0 40.0 31.0 40.0 40 36.42333235078822 39.0 35.0 40.0 31.0 40.0 41 36.087017541026064 39.0 35.0 40.0 30.0 40.0 42 36.202989975155646 39.0 35.0 40.0 30.0 40.0 43 36.16496951706658 39.0 35.0 40.0 30.0 40.0 44 36.027686429283 38.0 35.0 40.0 30.0 40.0 45 35.929180609289496 38.0 35.0 40.0 30.0 40.0 46 35.65214845699077 38.0 35.0 40.0 29.0 40.0 47 35.39492372200395 38.0 34.0 40.0 28.0 40.0 48 35.38745599457312 38.0 34.0 40.0 28.0 40.0 49 35.29940014755482 37.0 34.0 40.0 28.0 40.0 50 35.174624609121054 37.0 34.0 40.0 28.0 40.0 51 35.445764374913836 37.0 34.0 40.0 29.0 40.0 52 35.19057760385512 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 11.0 16 27.0 17 80.0 18 188.0 19 383.0 20 673.0 21 1223.0 22 2048.0 23 3284.0 24 4821.0 25 6731.0 26 9234.0 27 12479.0 28 16515.0 29 20833.0 30 26807.0 31 34319.0 32 44920.0 33 61384.0 34 100383.0 35 116057.0 36 156737.0 37 264401.0 38 548832.0 39 301220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.48742294183236 0.4188987842013668 0.07268141945658525 0.020996854509680182 8 99.37874691464489 0.5343238003383723 0.03928257670629727 0.04764670831042811 9 97.68302017832329 1.3007089899416993 0.4881768673500643 0.5280939643849508 10 52.22979096016193 36.385414569625055 4.676357138036436 6.708437332176584 11 32.57540841477786 25.78361818489115 24.092621509200836 17.548351891130157 12 29.79932429353372 18.668164903757685 26.593785277167132 24.93872552554146 13 25.058649867644828 19.1192511737184 29.74469786160881 26.077401097027963 14 24.56914627597135 20.266636978806442 30.144734086951203 25.019482658271002 15 24.84902742454544 21.273274638280153 28.646285489154604 25.231412448019807 16 28.45194921760759 22.037352481234063 25.509216984609424 24.001481316548926 17 29.274979767454067 22.651914261305855 23.307258393406062 24.765847577834013 18 28.03074308675681 22.252916341955693 24.97835420424517 24.73798636704232 19 28.745962864409353 22.207807714959625 24.71860465518723 24.327624765443794 20 27.564139910578785 23.129765752399784 25.040421829114447 24.265672507906988 21 29.247176240328614 21.516699709793475 26.319268709552933 22.91685534032498 22 28.34765714905402 21.354550924005807 25.4862012017815 24.811590725158673 23 26.82480836043985 23.03706810075952 26.085015340971037 24.053108197829594 24 26.678637950199384 23.55304849523504 24.279920373467128 25.488393181098445 25 26.410351218538608 25.04930511371469 24.034591740968036 24.505751926778665 26 27.422180407973496 23.784475364171406 23.88040330112085 24.912940926734244 27 25.767870544008886 21.907679599536916 25.781656940239145 26.542792916215053 28 27.037430354183478 23.06648677053957 24.110215027402624 25.78586784787433 29 28.488578345667065 22.854903082788177 23.768843090621615 24.887675480923146 30 27.05231274007221 23.03793335575305 24.925746700638502 24.98400720353624 31 28.42414569048214 22.793181559916313 24.4702764720439 24.312396277557653 32 28.51799701544711 23.59452305125828 24.608717271008825 23.278762662285786 33 29.45708710175918 22.80708332347904 24.188318711485337 23.547510863276443 34 27.804334696782924 23.63230585264246 26.541869977555287 22.021489473019333 35 27.422295775305965 25.611317073846052 24.851796240524738 22.114590910323244 36 28.46135165520396 25.70995614310856 22.763243737140147 23.06544846454733 37 27.7483815405346 25.21387661348425 23.395283668081262 23.64245817789989 38 28.733099406838857 24.020863028404012 23.485847024070814 23.76019054068631 39 27.717290044433728 23.99346328694221 23.69143161053373 24.597815058090337 40 27.870959331284794 24.342334100333815 24.104619711777794 23.682086856603597 41 26.02767777673306 23.84844655002645 25.55651759092244 24.56735808231805 42 26.56419355638838 22.86084450041042 24.691089546392952 25.88387239680825 43 25.64200478428328 22.765666451122033 26.1702141160007 25.42211464859399 44 25.803519049742356 23.284992498239205 25.615470297815 25.296018154203438 45 26.949751181505693 22.515030921329284 24.627752880866502 25.90746501629852 46 26.1514669244742 23.942874711653772 24.313492267216123 25.592166096655905 47 25.97881971143169 23.897246931661584 25.122563369833635 25.00136998707309 48 26.591593297850185 23.92164712247915 25.099028434009597 24.387731145661064 49 26.81817473882278 24.09792840649449 25.069955866226962 24.01394098845577 50 25.488681599429626 24.610043995332237 24.991159978149426 24.91011442708871 51 24.38167436070635 25.09049125140676 24.498714519497945 26.029119868388946 52 25.21560712347131 24.5667812456557 24.203316464706536 26.014295166166452 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 6.0 4 12.0 5 14.5 6 17.0 7 69.5 8 122.0 9 670.0 10 1218.0 11 2184.5 12 3151.0 13 4376.5 14 5221.5 15 4841.0 16 4589.5 17 4338.0 18 4606.0 19 4874.0 20 4777.5 21 4681.0 22 5613.0 23 6545.0 24 7689.5 25 8834.0 26 12020.0 27 15206.0 28 17295.5 29 19385.0 30 21416.5 31 23448.0 32 26286.5 33 29125.0 34 31097.5 35 33070.0 36 37788.5 37 42507.0 38 46262.0 39 50723.0 40 51429.0 41 55553.0 42 59677.0 43 61741.0 44 63805.0 45 67317.5 46 70830.0 47 75497.0 48 80164.0 49 85675.0 50 91186.0 51 94041.5 52 96897.0 53 101172.5 54 105448.0 55 115707.5 56 125967.0 57 131371.5 58 136776.0 59 137151.0 60 137526.0 61 129681.5 62 121837.0 63 115355.0 64 92631.0 65 76389.0 66 61701.5 67 47014.0 68 42075.0 69 37136.0 70 32327.0 71 27518.0 72 23607.0 73 19696.0 74 15132.0 75 10568.0 76 7362.5 77 4157.0 78 2970.5 79 1784.0 80 1442.5 81 1101.0 82 941.0 83 781.0 84 405.0 85 29.0 86 17.5 87 6.0 88 5.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1733593.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.373149862889163 #Duplication Level Percentage of deduplicated Percentage of total 1 70.181604091057 6.578226927634323 2 9.760877366177219 1.8298033269292384 3 3.986573516662368 1.1210025303330433 4 1.9935506078419627 0.74743394426226 5 1.1504440191448135 0.5391642100154433 6 0.6610478892555653 0.3717660559523383 7 0.47542191627910574 0.3119340608570202 8 0.3326580529238724 0.24944430265218964 9 0.26639692332388676 0.22472804567946456 >10 4.67577057422887 12.655003435973148 >50 3.9858301071561972 26.877813156758577 >100 2.4430516216265534 39.87174540372432 >500 0.06252782943833957 3.7949453899843415 >1k 0.02296940673245127 3.9533073320020944 >5k 0.0012760781518028484 0.8736818772422031 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGCATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 7659 0.44179919969681464 No Hit TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6950 0.40090148033592665 No Hit TAGCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3647 0.21037233076044953 No Hit TAGCATGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3614 0.20846876977468182 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3522 0.2031618724810264 No Hit TAGCATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3405 0.19641288353148637 No Hit TAGCATGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT 3375 0.1946823735444248 No Hit TAGCATGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2795 0.16122584712790142 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2684 0.15482296017577366 No Hit TAGCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2408 0.13890226829480737 No Hit TAGCATGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 2339 0.13492209532456578 No Hit TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2210 0.12748090238020113 No Hit TAGCATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2165 0.12488513739960878 No Hit TAGCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2037 0.1175016281214795 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.011998202576960106 0.0 0.0 0.0 0.0 8 0.01995854851744325 0.0 0.0 0.0 0.0 9 0.024919343813686372 0.0 0.0 0.0 0.0 10 0.045339361661012705 0.0 0.0 0.0 0.0 11 0.07262373579034986 0.0 0.0 0.0 0.0 12 0.08306447937895457 0.0 0.0 0.0 0.0 13 0.09194776397920389 0.0 0.0 0.0 0.0 14 0.1023885075678086 0.0 0.0 0.0 0.0 15 0.11357913881747331 0.0 0.0 0.0 0.0 16 0.1287499430373796 0.0 0.0 0.0 0.0 17 0.1419018189390474 0.0 0.0 0.0 0.0 18 0.1543038071796552 0.0 0.0 0.0 0.0 19 0.1663596934228507 0.0 0.0 0.0 0.0 20 0.17893473266216464 0.0 0.0 0.0 0.0 21 0.190817567906654 0.0 0.0 0.0 0.0 22 0.20189283182384793 0.0 0.0 0.0 0.0 23 0.2136026160696311 0.0 0.0 0.0 0.0 24 0.2264083899738866 0.0 0.0 0.0 0.0 25 0.2399640515392021 0.0 0.0 0.0 0.0 26 0.2545580190967545 0.0 0.0 0.0 0.0 27 0.27047871097772086 0.0 0.0 0.0 0.0 28 0.2870339231872764 0.0 0.0 0.0 0.0 29 0.2985706564343534 0.0 0.0 0.0 0.0 30 0.31201095066719814 0.0 0.0 0.0 0.0 31 0.32423988790909974 0.0 0.0 0.0 0.0 32 0.33721871281206145 0.0 0.0 0.0 0.0 33 0.3481786093967846 0.0 0.0 0.0 0.0 34 0.3605805976373924 0.0 0.0 0.0 0.0 35 0.3781164321729495 0.0 0.0 0.0 0.0 36 0.3914990427395588 0.0 0.0 0.0 0.0 37 0.4051123879711097 0.0 0.0 0.0 0.0 38 0.4183219475390129 0.0 0.0 0.0 0.0 39 0.43135845610820994 0.0 0.0 0.0 0.0 40 0.44335665868517005 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTTA 20 6.3123455E-4 46.000004 45 ACCGATA 20 6.3123455E-4 46.000004 17 GTCGTAC 20 6.3123455E-4 46.000004 16 TTGCGAC 20 6.3123455E-4 46.000004 21 ACGCTTA 40 5.6134013E-9 46.000004 38 TCGACAC 20 6.3123455E-4 46.000004 13 GCGTATA 20 6.3123455E-4 46.000004 16 CCGTTCG 20 6.3123455E-4 46.000004 45 TGCGTAT 40 5.6134013E-9 46.000004 18 GTACGAC 20 6.3123455E-4 46.000004 15 CGTATAG 50 1.6370905E-11 46.0 17 TCACACG 25 3.4178796E-5 46.0 39 TAACGGA 30 1.8619558E-6 46.0 12 CTCGATT 30 1.8619558E-6 46.0 34 ACGAATC 25 3.4178796E-5 46.0 13 TAATCGT 30 1.8619558E-6 46.0 21 TAGCATG 177340 0.0 44.73678 1 AGCATGG 176360 0.0 44.699764 2 GCATGGG 172795 0.0 44.636997 3 ATGGGAT 21885 0.0 44.486633 5 >>END_MODULE