##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527777_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 336999 Sequences flagged as poor quality 0 Sequence length 50 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.675924854376426 34.0 31.0 34.0 31.0 34.0 2 33.12857308181923 34.0 33.0 34.0 31.0 34.0 3 33.09258781183327 34.0 34.0 34.0 31.0 34.0 4 36.466864886839424 37.0 37.0 37.0 35.0 37.0 5 36.41749085308859 37.0 37.0 37.0 35.0 37.0 6 36.31250241098638 37.0 37.0 37.0 35.0 37.0 7 36.54016480761071 37.0 37.0 37.0 35.0 37.0 8 36.71031664782388 37.0 37.0 37.0 35.0 37.0 9 38.79433470128991 39.0 39.0 39.0 39.0 39.0 10 38.36985272953332 39.0 39.0 39.0 37.0 39.0 11 38.114433573986865 39.0 39.0 39.0 37.0 39.0 12 37.29576645628028 39.0 35.0 39.0 35.0 39.0 13 37.09068572903777 39.0 35.0 39.0 35.0 39.0 14 37.78158392161401 40.0 36.0 40.0 34.0 40.0 15 37.83934670429289 40.0 36.0 40.0 34.0 40.0 16 37.91645079065516 40.0 36.0 40.0 35.0 40.0 17 37.71839382312707 40.0 36.0 40.0 33.0 40.0 18 37.65439660058338 40.0 36.0 40.0 33.0 40.0 19 37.618749610532966 40.0 36.0 40.0 33.0 40.0 20 37.502408019014894 40.0 35.0 40.0 33.0 40.0 21 37.44976097851922 40.0 35.0 40.0 33.0 40.0 22 37.53798082486892 40.0 35.0 40.0 33.0 40.0 23 37.49958011744842 40.0 35.0 40.0 34.0 40.0 24 37.51024780488963 40.0 35.0 40.0 34.0 40.0 25 37.49796290196707 40.0 35.0 40.0 34.0 40.0 26 37.41637215540699 40.0 35.0 40.0 34.0 40.0 27 37.335748770767864 39.0 35.0 40.0 34.0 40.0 28 37.185831411962646 39.0 35.0 40.0 33.0 40.0 29 37.25522330926798 40.0 35.0 40.0 33.0 40.0 30 37.37724444286185 40.0 35.0 40.0 34.0 40.0 31 37.396722245466606 40.0 35.0 40.0 34.0 40.0 32 37.385716278089845 40.0 35.0 40.0 34.0 40.0 33 37.26190285431114 40.0 35.0 40.0 33.0 40.0 34 36.76738506642453 39.0 35.0 40.0 32.0 40.0 35 36.84679776497853 39.0 35.0 40.0 32.0 40.0 36 36.83550396291977 39.0 35.0 40.0 33.0 40.0 37 36.821949026554975 39.0 35.0 40.0 33.0 40.0 38 36.80555135178442 39.0 35.0 40.0 33.0 40.0 39 36.72652441105166 39.0 35.0 40.0 33.0 40.0 40 36.473532562411165 38.0 35.0 40.0 32.0 40.0 41 36.38013169178544 38.0 35.0 40.0 32.0 40.0 42 36.368630173976776 38.0 35.0 40.0 32.0 40.0 43 36.20873058970501 38.0 35.0 40.0 32.0 40.0 44 35.94195235000697 37.0 35.0 40.0 31.0 40.0 45 35.87209160858044 37.0 35.0 40.0 31.0 40.0 46 35.69465191291369 37.0 35.0 40.0 31.0 40.0 47 35.60701960539942 36.0 35.0 40.0 31.0 40.0 48 35.484743278169965 36.0 35.0 40.0 31.0 40.0 49 35.35282300540951 36.0 35.0 40.0 30.0 40.0 50 34.898079816260584 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 2.0 16 8.0 17 23.0 18 59.0 19 109.0 20 165.0 21 236.0 22 380.0 23 547.0 24 816.0 25 1169.0 26 1515.0 27 1903.0 28 2578.0 29 3299.0 30 4294.0 31 5895.0 32 7725.0 33 11201.0 34 28383.0 35 37442.0 36 25408.0 37 45208.0 38 94407.0 39 64226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.62789207089635 0.2943628912845439 0.041839886765242626 0.03590515105386069 8 99.78664625117581 0.11335345208739493 0.08694387817174531 0.013056418565040253 9 99.6830851130122 0.17092038848779967 0.04273009712194992 0.10326440137804563 10 72.5370104955801 21.828551420033886 1.6813106270345015 3.9531274573515054 11 44.6737230674275 23.121433594758443 17.336253223303334 14.868590114510727 12 38.47726551117363 14.508054920044271 23.562087721328552 23.45259184745355 13 27.6626933611079 14.231496235893875 27.893554580280654 30.212255822717577 14 25.47040198932341 15.735655001943627 31.479915370668753 27.31402763806421 15 27.514918441894487 18.754655058323618 28.3674432268345 25.3629832729474 16 36.41138401004157 18.54248825664171 22.77692218671272 22.269205546603995 17 34.96746281146235 20.04011881340894 21.981370864601974 23.011047510526737 18 31.88318066225716 22.76327229457654 22.28760322730928 23.065943815857022 19 32.45113486983641 23.13181938225336 20.333888231122348 24.083157516787885 20 33.09327327380793 23.6739574894881 21.17395007106846 22.05881916563551 21 33.71434336600405 22.647248211419026 22.63330158249728 21.005106840079645 22 31.600687242395374 20.12261163979715 25.859720651990063 22.416980465817407 23 31.095937970142344 19.82765527494147 25.715506574203484 23.3609001807127 24 33.65084169389227 18.430025014911024 23.406004172119204 24.513129119077504 25 29.8327294739747 22.246060077329606 20.354659806112185 27.566550642583508 26 27.528271597245098 21.549322104813367 23.403927014620223 27.51847928332132 27 24.391467036994175 19.665933726806312 25.27010465906427 30.672494577135247 28 26.556161887720737 22.911937424146657 21.787305006839784 28.74459568129282 29 31.01255493339743 23.48256226279603 20.912524962982086 24.59235784082445 30 30.076647111712496 20.268012664726008 23.81461072584785 25.840729497713642 31 32.2956447941982 20.071276175893697 20.41103979537031 27.22203923453779 32 35.71642645823875 20.69086258416197 21.488194326986136 22.104516630613148 33 37.09981335256188 18.946940495372388 21.96148949996884 21.991756652096893 34 29.382579770266382 21.77157795720462 27.681091041813183 21.164751230715815 35 28.87723702444221 25.45764230754394 26.16446933076953 19.500651337244324 36 27.666847676105867 28.235098620470684 22.51045255327167 21.58760115015178 37 31.428579906765304 27.2517129130947 18.68640559764272 22.63330158249728 38 31.474574108528515 28.721153475232864 18.833883780070565 20.97038863616806 39 33.04401496740346 24.244285591351904 18.78907652544963 23.922622915795003 40 30.100386054558026 22.27454680874424 19.110145727435395 28.51492140926234 41 25.827673079148607 24.78048896287526 21.959412342469857 27.43242561550628 42 24.227371594574464 21.660004925830638 20.932109590829644 33.18051388876525 43 24.203632651728938 20.873058970501397 24.511942171935228 30.41136620583444 44 27.516995599393468 20.476618624981082 23.96653996005923 28.039845815566217 45 30.501574188647446 19.332995053397784 21.80807658182962 28.35735417612515 46 26.887023403630277 23.74725147552367 21.373357190970893 27.99236792987516 47 25.846960970210592 20.758815308057294 23.775144733367163 29.61907898836495 48 28.69415042774608 21.276917735660934 25.548740500713652 24.480191335879333 49 30.270119495903547 19.701838877860173 23.865649452965737 26.162392173270543 50 25.714913100632348 20.26089098187235 25.45348799254597 28.570707924949335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.5 10 3.0 11 2.5 12 2.0 13 37.5 14 73.0 15 89.0 16 105.0 17 199.5 18 294.0 19 208.5 20 123.0 21 324.0 22 525.0 23 462.0 24 399.0 25 518.5 26 638.0 27 911.5 28 1185.0 29 1152.5 30 1120.0 31 1256.0 32 1392.0 33 1644.5 34 1897.0 35 2016.0 36 2135.0 37 2693.5 38 3252.0 39 4009.0 40 4766.0 41 4967.0 42 5168.0 43 5911.5 44 6655.0 45 7712.0 46 8769.0 47 9048.5 48 9328.0 49 9553.0 50 9778.0 51 10370.0 52 10962.0 53 13116.0 54 15270.0 55 16606.5 56 17943.0 57 18344.0 58 18745.0 59 24681.5 60 30618.0 61 32885.5 62 35153.0 63 36232.5 64 37312.0 65 39985.5 66 42659.0 67 33807.5 68 24956.0 69 20112.5 70 15269.0 71 12980.5 72 10692.0 73 9220.5 74 7749.0 75 6063.0 76 4377.0 77 4280.0 78 4183.0 79 3370.0 80 2557.0 81 1654.0 82 751.0 83 451.5 84 152.0 85 88.5 86 25.0 87 17.0 88 9.0 89 8.5 90 8.0 91 4.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 336999.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.84245947317351 #Duplication Level Percentage of deduplicated Percentage of total 1 67.99892613846103 6.012777485986605 2 8.98352293701131 1.5887287499369434 3 3.3994429343266552 0.9017830913444846 4 1.5873015873015872 0.5614259982967308 5 0.8658008658008658 0.38279045338413464 6 0.526863317560992 0.27952605200608904 7 0.3926306251887647 0.24302742738109015 8 0.2986677405282056 0.2112765913251968 9 0.3255142790026511 0.2590512138018214 >10 9.164737071713816 24.17633286745658 >50 4.560555723346421 27.803049860682076 >100 1.7886506258599282 25.879898753408764 >500 0.07047216349541931 3.7842842263626895 >1k 0.033558173093056816 5.835922361787424 >5k 0.0033558173093056814 2.0801248668393675 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCGCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7010 2.0801248668393675 No Hit CCGCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4111 1.2198849254745563 No Hit CCGCTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2751 0.8163228971005848 No Hit CCGCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2745 0.8145424763871703 No Hit CCGCTAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 2352 0.6979249196585153 No Hit CCGCTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1533 0.4548974922774252 No Hit CCGCTAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1318 0.3910990833800694 No Hit CCGCTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1254 0.3721079291036472 No Hit CCGCTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1237 0.36706340374897256 No Hit CCGCTAGGGGGGCTGGCAAGATGGCTCAGCAGGTAAGAGCACCGACTACT 1199 0.35578740589734686 No Hit CCGCTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1167 0.3462918287591358 No Hit CCGCTAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 847 0.25133605737702486 No Hit CCGCTAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 770 0.22848732488820442 No Hit CCGCTAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 743 0.22047543167783878 No Hit CCGCTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 719 0.2133537488241805 No Hit CCGCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 658 0.1952528049044656 No Hit CCGCTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 656 0.19465933133332738 No Hit CCGCTAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 619 0.18368007026727082 No Hit CCGCTAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTG 602 0.17863554491259617 No Hit CCGCTAGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 600 0.17804207134145797 No Hit CCGCTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 595 0.17655838741361252 No Hit CCGCTAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 576 0.17092038848779967 No Hit CCGCTAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 565 0.1676562838465396 No Hit CCGCTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 556 0.16498565277641772 No Hit CCGCTAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC 555 0.16468891599084864 No Hit CCGCTAGGGATCCGATTAGCCCAACTCTGTCTCCCAGGCCCCCTGCTGGG 545 0.16172154813515766 No Hit CCGCTAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 536 0.1590509170650358 No Hit CCGCTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 535 0.15875418027946672 No Hit CCGCTAGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 530 0.15727049635162121 No Hit CCGCTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 524 0.15549007563820666 No Hit CCGCTAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGC 519 0.15400639171036115 No Hit CCGCTAGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 503 0.1492586031412556 No Hit CCGCTAGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGC 483 0.14332386742987369 No Hit CCGCTAGGGGCGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCG 475 0.1409499731453209 No Hit CCGCTAGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGAAA 470 0.13946628921747542 No Hit CCGCTAGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 452 0.1341250270772317 No Hit CCGCTAGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGT 441 0.1308609224359716 No Hit CCGCTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 438 0.12997071207926433 No Hit CCGCTAGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCGACTGCTCT 431 0.12789355458028065 No Hit CCGCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 430 0.12759681779471155 No Hit CCGCTAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 411 0.12195881886889871 No Hit CCGCTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 404 0.11988166136991504 No Hit CCGCTAGGGGGAGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 400 0.11869471422763866 No Hit CCGCTAGGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCT 388 0.1151338728008095 No Hit CCGCTAGGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTG 382 0.11335345208739493 No Hit CCGCTAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 373 0.11068282101727306 No Hit CCGCTAGGGAGGGCACCGCCAGTGTGTTTGCACCAGGAGACAGTAAAGGA 365 0.10830892673272027 No Hit CCGCTAGGGGATCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCGTGGT 363 0.10771545316158208 No Hit CCGCTAGGGGAGAGCGCGGGACGTCTGTCTTCGAGTCCGAACGTTCGTGG 361 0.1071219795904439 No Hit CCGCTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 356 0.1056382956625984 No Hit CCGCTAGGGGGGCCCCAGAAAGGACTCTTTCTCCCTGAGTTTTACAGTAA 352 0.10445134852032202 No Hit CCGCTAGGGGTCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC 343 0.10178071745020015 No Hit CCGCTAGGGGGGCTGGTGAGATGGCTCAGTGAGTAAGAGCACCCGACTGC 338 0.10029703352235465 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.018991154276422187 0.0 0.0 0.0 0.0 7 0.020771574989836766 0.0 0.0 0.0 0.0 8 0.021661785346544057 0.0 0.0 0.0 0.0 9 0.028783468200202375 0.0 0.0 0.0 0.0 10 0.04273009712194992 0.0 0.0 0.0 0.0 11 0.06795272389532313 0.0 0.0 0.0 0.0 12 0.07329398603556687 0.0 0.0 0.0 0.0 13 0.07685482746239602 0.0 0.0 0.0 0.0 14 0.0887242988851599 0.0 0.0 0.0 0.0 15 0.11602408315751679 0.0 0.0 0.0 0.0 16 0.13026744886483343 0.0 0.0 0.0 0.0 17 0.13857607886076814 0.0 0.0 0.0 0.0 18 0.14777491921341013 0.0 0.0 0.0 0.0 19 0.16617259991869412 0.0 0.0 0.0 0.0 20 0.17893228169816527 0.0 0.0 0.0 0.0 21 0.1857572277662545 0.0 0.0 0.0 0.0 22 0.19703322561788017 0.0 0.0 0.0 0.0 23 0.20623206597052215 0.0 0.0 0.0 0.0 24 0.21839827417885513 0.0 0.0 0.0 0.0 25 0.2293775352449117 0.0 0.0 0.0 0.0 26 0.2385763755975537 0.0 0.0 0.0 0.0 27 0.24896216309247207 0.0 0.0 0.0 0.0 28 0.2649859495132033 0.0 0.0 0.0 0.0 29 0.27863584164938177 0.0 0.0 0.0 0.0 30 0.28753794521645465 0.0 0.0 0.0 0.0 31 0.30296825806604766 0.0 0.0 0.0 0.0 32 0.3181018341300716 0.0 0.0 0.0 0.0 33 0.334719094121941 0.0 0.0 0.0 0.0 34 0.3480722494725504 0.0 0.0 0.0 0.0 35 0.3629090887510052 0.0 0.0 0.0 0.0 36 0.3798230855284437 0.0 0.0 0.0 0.0 37 0.3964403455203131 0.0 0.0 0.0 0.0 38 0.40949676408535335 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGGCC 130 0.0 44.000004 5 ATTTATA 20 7.848553E-4 44.0 25 GTGCATA 30 2.5223726E-6 44.0 33 TTGATAC 30 2.5223726E-6 44.0 16 ATCCTAG 30 2.5223726E-6 44.0 10 AGACTTA 30 2.5223726E-6 44.0 44 CGGAATT 20 7.848553E-4 44.0 25 CGGAAAT 30 2.5223726E-6 44.0 36 TCGTTCT 20 7.848553E-4 44.0 23 TCGTTCC 20 7.848553E-4 44.0 27 GATACCA 30 2.5223726E-6 44.0 9 CTCACGC 25 4.4361208E-5 44.0 25 ACCGGAT 30 2.5223726E-6 44.0 30 ATTAGTC 20 7.848553E-4 44.0 18 GCGACGT 20 7.848553E-4 44.0 17 CCCTCGA 20 7.848553E-4 44.0 21 TCCGCGC 25 4.4361208E-5 44.0 13 ACGCCCA 25 4.4361208E-5 44.0 36 GATCGTA 20 7.848553E-4 44.0 36 CTCGTAA 25 4.4361208E-5 44.0 43 >>END_MODULE