##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527774_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1076431 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.67017579389668 34.0 31.0 34.0 31.0 34.0 2 32.99944446044382 34.0 31.0 34.0 31.0 34.0 3 33.17125575164595 34.0 34.0 34.0 31.0 34.0 4 36.514944292760056 37.0 37.0 37.0 35.0 37.0 5 36.56615333449148 37.0 37.0 37.0 35.0 37.0 6 36.40079391990755 37.0 37.0 37.0 35.0 37.0 7 36.54386579353437 37.0 37.0 37.0 35.0 37.0 8 36.6753345082035 37.0 37.0 37.0 35.0 37.0 9 38.678976172183816 39.0 39.0 39.0 39.0 39.0 10 38.179692892530966 39.0 39.0 39.0 37.0 39.0 11 38.00414517976535 39.0 38.0 39.0 37.0 39.0 12 37.772077355631716 39.0 38.0 39.0 35.0 39.0 13 37.68618610946731 39.0 38.0 39.0 35.0 39.0 14 38.54738297206231 40.0 39.0 40.0 35.0 40.0 15 38.56209733833381 40.0 38.0 40.0 35.0 40.0 16 38.570430431676535 40.0 38.0 40.0 35.0 40.0 17 38.53837821467423 40.0 38.0 40.0 35.0 40.0 18 38.44063112266369 40.0 38.0 40.0 35.0 40.0 19 38.41295261842143 40.0 38.0 40.0 35.0 40.0 20 38.31219557965164 40.0 38.0 40.0 35.0 40.0 21 38.31390400313629 40.0 38.0 40.0 35.0 40.0 22 38.32135176337359 40.0 38.0 40.0 35.0 40.0 23 38.17743264547379 40.0 38.0 40.0 35.0 40.0 24 38.067907743273835 40.0 38.0 40.0 34.0 40.0 25 37.9589476705892 40.0 38.0 40.0 34.0 40.0 26 37.81971069209266 40.0 37.0 40.0 34.0 40.0 27 37.687557307435405 40.0 37.0 40.0 34.0 40.0 28 37.52319377647058 40.0 37.0 40.0 33.0 40.0 29 37.49815269162631 40.0 37.0 40.0 33.0 40.0 30 37.59630947083464 40.0 37.0 40.0 33.0 40.0 31 37.58464685613848 40.0 37.0 40.0 33.0 40.0 32 37.515445950553264 40.0 37.0 40.0 33.0 40.0 33 37.3595372113958 40.0 36.0 40.0 33.0 40.0 34 37.07191914762767 40.0 36.0 40.0 33.0 40.0 35 36.99761062251087 40.0 36.0 40.0 33.0 40.0 36 36.81932051380906 40.0 35.0 40.0 32.0 40.0 37 36.62433913553214 40.0 35.0 40.0 31.0 40.0 38 36.46284434394773 40.0 35.0 40.0 31.0 40.0 39 36.25820047917609 39.0 35.0 40.0 31.0 40.0 40 36.03648352750896 39.0 35.0 40.0 30.0 40.0 41 35.86057257734123 39.0 35.0 40.0 30.0 40.0 42 35.71314278388489 39.0 35.0 40.0 29.0 40.0 43 35.54738297206231 38.0 35.0 40.0 29.0 40.0 44 35.22279551592253 38.0 35.0 40.0 27.0 40.0 45 35.18679135030485 38.0 35.0 40.0 28.0 40.0 46 34.95938708565621 37.0 35.0 40.0 26.0 40.0 47 34.85638559275978 37.0 35.0 40.0 26.0 40.0 48 34.680800720157634 37.0 34.0 40.0 26.0 40.0 49 34.55033996605449 36.0 34.0 40.0 26.0 40.0 50 34.05562548830348 35.0 34.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 0.0 13 5.0 14 2.0 15 17.0 16 32.0 17 87.0 18 184.0 19 387.0 20 687.0 21 1226.0 22 1838.0 23 2954.0 24 4328.0 25 5816.0 26 7877.0 27 10228.0 28 13264.0 29 15642.0 30 16492.0 31 17930.0 32 21544.0 33 27524.0 34 46409.0 35 67789.0 36 93783.0 37 173122.0 38 327146.0 39 220116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.41324618113005 0.3650024943540273 0.14390146697744677 0.07784985753847669 8 98.41569036937805 1.2080662857164093 0.11203690714964545 0.2642064377558803 9 93.81140082364777 3.5006424006740797 1.288610231403592 1.3993465442745516 10 45.175491973010814 38.58723875473672 6.680409612878114 9.556859659374359 11 31.036267071461154 26.042542438855808 23.581167766442995 19.34002272324004 12 27.937601202492313 20.69979404160601 27.13039665338512 24.232208102516555 13 23.26252216816498 20.513809059753946 30.69291018188811 25.53075859019296 14 24.762293170672343 23.405959137185757 27.19765595751144 24.63409173463046 15 25.14234539882259 22.650685459634662 26.572441707828926 25.63452743371382 16 28.280029096152003 23.30023940224687 24.319533718371172 24.10019778322995 17 28.541634345350513 22.991255361467665 23.55376238699926 24.913347906182562 18 27.997985936859866 23.29866010919418 23.111746131428767 25.591607822517187 19 28.547765718378603 23.0890786311431 23.033710474707622 25.329445175770672 20 28.071005015648936 24.074929094386913 23.53601856505433 24.318047324909816 21 28.563001251357495 23.063438343934724 25.374594377159337 22.998966027548445 22 28.693432277591413 22.39549028223825 22.633406135646407 26.27767130452393 23 26.309814563125737 25.255775799842255 23.752753311638184 24.681656325393824 24 26.91765658922866 23.30516308058761 23.927961940895422 25.849218389288303 25 25.406644736169802 24.030244390954923 23.687166200155886 26.87594467271939 26 25.87457997772268 23.949143047719733 23.29039204556539 26.885884928992198 27 27.475518635193524 21.422088364233286 23.38830821483216 27.71408478574103 28 29.03911165694782 24.353163370434334 22.054177183674568 24.553547788943277 29 28.466292776778072 22.81874082035913 23.542428636856428 25.17253776600637 30 27.781901487415357 23.744578147600727 22.994692646347048 25.478827718636865 31 29.53826116118915 24.723182442720436 21.40276524923567 24.335791146854746 32 30.351132585367758 24.081339166189007 22.09830448955855 23.469223758884684 33 29.234386597933355 24.694011971041338 22.666106791796224 23.405494639229083 34 27.263521767767745 26.74551364648547 23.535832765871664 22.455131819875124 35 28.295264629130894 25.933199619854875 23.972925343101416 21.798610407912815 36 28.324342201218656 26.96122649756464 21.484145291244864 23.23028600997184 37 28.203479832892214 26.122993484951664 22.03996354620036 23.633563135955765 38 29.63487673617724 25.86993499815594 21.396355177433573 23.098833088233246 39 28.523983422996924 25.447148957991732 21.275957307063806 24.752910311947538 40 27.907037236943193 26.16749238920098 21.780959485559222 24.1445108882966 41 26.12159999108164 25.950200245069123 22.7463720387094 25.18182772513984 42 26.403271552008444 24.491490861931698 23.585348248053055 25.519889338006802 43 26.275441714331897 23.841565320954153 24.302161494791584 25.580831469922366 44 25.77963659537862 24.49446364885441 24.406301936677778 25.319597819089196 45 26.539090754539767 24.641709501119905 23.545494323370473 25.273705420969854 46 26.210969397945615 25.0138652640067 22.833511855381346 25.941653482666325 47 26.32439979896529 25.880339752385428 23.35021938238494 24.445041066264352 48 26.815838637125832 24.95803260961455 23.79678771793083 24.429341035328786 49 25.32860907944866 25.54060594687444 23.634492131869113 25.496292841807787 50 23.897769573711646 26.17055807571502 23.05990815946401 26.87176419110932 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 19.0 4 38.0 5 255.5 6 473.0 7 378.5 8 284.0 9 1635.0 10 2986.0 11 3028.5 12 3071.0 13 3410.0 14 3749.0 15 3270.5 16 2792.0 17 3286.5 18 3781.0 19 3701.5 20 3622.0 21 4136.0 22 4650.0 23 5787.5 24 6925.0 25 8653.0 26 10381.0 27 10661.0 28 10941.0 29 12611.5 30 14282.0 31 16341.5 32 18401.0 33 19881.5 34 21362.0 35 20957.0 36 20552.0 37 23219.0 38 25886.0 39 25908.0 40 25930.0 41 27319.5 42 28709.0 43 33388.5 44 38068.0 45 39958.5 46 41849.0 47 44899.5 48 47950.0 49 52458.5 50 56967.0 51 61738.0 52 66509.0 53 71883.0 54 77257.0 55 85206.0 56 93155.0 57 92788.0 58 92421.0 59 88293.0 60 84165.0 61 81886.5 62 79608.0 63 69374.5 64 59141.0 65 51680.0 66 44219.0 67 35706.0 68 27193.0 69 23858.5 70 20524.0 71 17096.0 72 13668.0 73 14496.5 74 15325.0 75 10654.5 76 5984.0 77 3891.5 78 1799.0 79 1535.5 80 1272.0 81 831.0 82 390.0 83 254.0 84 118.0 85 68.5 86 19.0 87 16.0 88 13.0 89 7.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1076431.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.599805219112424 #Duplication Level Percentage of deduplicated Percentage of total 1 71.37626213053758 9.707032622436214 2 9.03721154307506 2.458086334194705 3 3.58717736096768 1.4635474018671055 4 1.8081480403360477 0.9836184462356031 5 1.124993990218064 0.7649849569818868 6 0.7277192837015101 0.5938104307519531 7 0.5598137889381339 0.5329350941972354 8 0.4634735083191119 0.5042519549886884 9 0.3453756726536219 0.42273376879582725 >10 7.109398936829317 27.13901010353928 >50 2.8086538596733246 25.8769395078432 >100 1.0046258806878912 22.928847805337625 >500 0.03327953227951606 3.050114194097435 >1k 0.013866471783131691 3.574087378733253 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACTTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3880 0.3604504143786272 No Hit TACTTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 3850 0.3576634266385862 No Hit TACTTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3337 0.3100059362838863 No Hit TACTTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2920 0.27126680669731734 No Hit TACTTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2890 0.2684798189572764 No Hit TACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1936 0.17985360882397478 No Hit TACTTCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTACTTCGGGA 1724 0.16015889546101886 No Hit TACTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1722 0.1599730962783495 No Hit TACTTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1686 0.15662871099030035 No Hit TACTTCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 1525 0.141671876785414 No Hit TACTTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1456 0.13526180498331988 No Hit TACTTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1420 0.13191741969527077 No Hit TACTTCGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 1407 0.1307097250079197 No Hit TACTTCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 1339 0.12439255279716026 No Hit TACTTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1335 0.12402095443182146 No Hit TACTTCGGGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAA 1201 0.11157240919297197 No Hit TACTTCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1085 0.10079605659814703 No Hit TACTTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1077 0.10005285986746944 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.001950891418028652 0.0 0.0 0.0 0.0 8 0.013563340334865868 0.0 0.0 0.0 0.0 9 0.02118110682431108 0.0 0.0 0.0 0.0 10 0.08676821830660766 0.0 0.0 0.0 0.0 11 0.13628370048800156 0.0 0.0 0.0 0.0 12 0.17028495091650092 0.0 0.0 0.0 0.0 13 0.20837378336372697 0.0 0.0 0.0 0.0 14 0.24674131458495713 0.0 0.0 0.0 0.0 15 0.30489645876047794 0.0 0.0 0.0 0.0 16 0.36035751478729244 0.0 0.0 0.0 0.0 17 0.4069931096373107 0.0 0.0 0.0 0.0 18 0.44870502614658997 0.0 0.0 0.0 0.0 19 0.4952477214052735 0.0 0.0 0.0 0.0 20 0.5430910109426429 0.0 0.0 0.0 0.0 21 0.5887976098793142 0.0 0.0 0.0 0.0 22 0.6355261043206671 0.0 0.0 0.0 0.0 23 0.6894078672947918 0.0 0.0 0.0 0.0 24 0.7481204090183208 0.0 0.0 0.0 0.0 25 0.799958380983082 0.0 0.0 0.0 0.0 26 0.8595070190286233 0.0 0.0 0.0 0.0 27 0.9169189664734665 0.0 0.0 0.0 0.0 28 0.984364069782457 0.0 0.0 0.0 0.0 29 1.0265404842484098 0.0 0.0 0.0 0.0 30 1.0708535893150606 0.0 0.0 0.0 0.0 31 1.1055980364742375 0.0 0.0 0.0 0.0 32 1.1418288770947698 0.0 0.0 0.0 0.0 33 1.1725786418265547 0.0 0.0 0.0 0.0 34 1.212711265283144 0.0 0.0 0.0 0.0 35 1.2591610609504928 0.0 0.0 0.0 0.0 36 1.290189524456282 0.0 0.0 0.0 0.0 37 1.3232617789714343 0.0 0.0 0.0 0.0 38 1.3551263387992356 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 25 4.4426524E-5 44.0 32 GTCGATA 20 7.8562583E-4 44.0 28 ATAATAC 20 7.8562583E-4 44.0 14 GCACGAC 35 1.4459692E-7 44.0 24 ATTCGTC 40 8.310963E-9 44.0 24 CGATTGT 20 7.8562583E-4 44.0 43 GGATACG 70 0.0 44.0 8 TCGATCT 20 7.8562583E-4 44.0 28 ATCACGA 20 7.8562583E-4 44.0 30 ATTCACG 20 7.8562583E-4 44.0 44 CTCGGTA 20 7.8562583E-4 44.0 26 TACGATC 40 8.310963E-9 44.0 11 CTATTCG 30 2.5275658E-6 44.0 39 CGAGATA 30 2.5275658E-6 44.0 19 TATACCC 25 4.4426524E-5 44.0 23 CAATCGT 20 7.8562583E-4 44.0 23 TATCGCG 20 7.8562583E-4 44.0 27 CGATAGG 20 7.8562583E-4 44.0 30 AATCGCA 25 4.4426524E-5 44.0 31 ACGAACA 45 4.802132E-10 44.0 38 >>END_MODULE