##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527771_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4888256 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.951702611319867 33.0 31.0 34.0 3.0 34.0 2 30.469647252517053 34.0 31.0 34.0 16.0 34.0 3 32.282551282093245 34.0 31.0 34.0 28.0 34.0 4 36.27985215995234 37.0 35.0 37.0 35.0 37.0 5 36.29467953396876 37.0 35.0 37.0 35.0 37.0 6 36.47203153844643 37.0 37.0 37.0 35.0 37.0 7 36.50428189521989 37.0 37.0 37.0 35.0 37.0 8 36.68080067819689 37.0 37.0 37.0 35.0 37.0 9 38.77075014074549 39.0 39.0 39.0 39.0 39.0 10 38.37368521615889 39.0 39.0 39.0 37.0 39.0 11 38.18246753034211 39.0 39.0 39.0 37.0 39.0 12 37.87320672239752 39.0 38.0 39.0 35.0 39.0 13 37.79793447806334 39.0 38.0 39.0 35.0 39.0 14 38.563115761531314 40.0 39.0 40.0 35.0 40.0 15 38.633622298013854 40.0 39.0 40.0 35.0 40.0 16 38.67722864759947 40.0 39.0 40.0 35.0 40.0 17 38.6310923568651 40.0 39.0 40.0 35.0 40.0 18 38.57763914164888 40.0 38.0 40.0 35.0 40.0 19 38.59144733827361 40.0 39.0 40.0 35.0 40.0 20 38.48801167532961 40.0 38.0 40.0 35.0 40.0 21 38.49024969232381 40.0 38.0 40.0 35.0 40.0 22 38.49135315335367 40.0 38.0 40.0 35.0 40.0 23 38.425188860812526 40.0 38.0 40.0 35.0 40.0 24 38.36463372622056 40.0 38.0 40.0 35.0 40.0 25 38.33409072683591 40.0 38.0 40.0 35.0 40.0 26 38.23735377197921 40.0 38.0 40.0 35.0 40.0 27 38.128566098011234 40.0 38.0 40.0 35.0 40.0 28 37.98912863810733 40.0 38.0 40.0 34.0 40.0 29 37.9587233156365 40.0 38.0 40.0 34.0 40.0 30 38.13487550570183 40.0 38.0 40.0 35.0 40.0 31 38.17495196650912 40.0 38.0 40.0 35.0 40.0 32 38.17724358135089 40.0 38.0 40.0 35.0 40.0 33 38.08109252052266 40.0 38.0 40.0 35.0 40.0 34 37.816082668338154 40.0 38.0 40.0 34.0 40.0 35 37.79522267246232 40.0 37.0 40.0 34.0 40.0 36 37.770041094410765 40.0 37.0 40.0 34.0 40.0 37 37.66489070948821 40.0 37.0 40.0 34.0 40.0 38 37.590476849003 40.0 37.0 40.0 33.0 40.0 39 37.48172047454143 40.0 36.0 40.0 33.0 40.0 40 37.28784417182734 40.0 36.0 40.0 33.0 40.0 41 37.16610566222391 40.0 35.0 40.0 33.0 40.0 42 37.09106397046308 40.0 35.0 40.0 33.0 40.0 43 36.98128535003077 40.0 35.0 40.0 33.0 40.0 44 36.631497409300984 40.0 35.0 40.0 31.0 40.0 45 36.63466909261708 39.0 35.0 40.0 31.0 40.0 46 36.47252455681536 39.0 35.0 40.0 31.0 40.0 47 36.424781762657275 39.0 35.0 40.0 31.0 40.0 48 36.36822416829233 39.0 35.0 40.0 31.0 40.0 49 36.28661285333665 39.0 35.0 40.0 31.0 40.0 50 35.84362398368661 38.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 6.0 15 31.0 16 58.0 17 169.0 18 390.0 19 728.0 20 1248.0 21 2152.0 22 3504.0 23 5503.0 24 8168.0 25 11712.0 26 16070.0 27 21815.0 28 29954.0 29 41209.0 30 55734.0 31 74117.0 32 91823.0 33 129890.0 34 221681.0 35 303237.0 36 391061.0 37 881428.0 38 1482631.0 39 1113932.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.60255764018906 0.31808890532738054 0.05871214600871968 0.02064130847484256 8 98.97343756137158 0.9248901857840506 0.06581079223346732 0.0358614606109009 9 97.87005836028227 1.0808149164037235 0.441077554039723 0.608049169274277 10 52.10766375574438 35.12334460388327 4.928649399704107 7.840342240668247 11 32.69613948205659 25.644360688147266 24.003305064219223 17.656194765576927 12 27.584152712132916 19.31222505531625 27.447232714489584 25.656389518061246 13 24.840024745021537 19.09646303303264 29.981347130755836 26.082165091189985 14 25.043307879129078 20.25755197763783 29.826568002985116 24.87257214024797 15 25.64043290695086 20.355787421935347 28.034538289320366 25.969241381793424 16 28.864241152672854 21.751602207413033 25.305221330470417 24.078935309443693 17 28.775170531166943 22.051893354194217 24.19998052475157 24.97295558988727 18 27.651436422315033 21.598561941109466 24.794548403356945 25.955453233218556 19 27.639857650663142 22.379106167925737 24.330517877950747 25.650518303460373 20 26.63708692834418 23.23800144673274 24.48601300750206 25.63889861742102 21 27.361251129237097 22.043587733539326 26.070177175663467 24.524983961560114 22 27.148107627751084 21.51358275834981 25.618502795270953 25.719806818628154 23 25.89944143678236 22.52058811977114 25.940580853375927 25.63938959007057 24 26.663517622644967 23.08520666675395 24.26243633721311 25.98883937338797 25 26.4950321750743 23.723777969075268 23.95623306144359 25.824956794406837 26 25.71549035075086 24.034747770984172 23.938844446772016 26.310917431492946 27 25.85171480380733 22.398479130389244 24.332461311355218 27.417344754448216 28 27.173720034302622 23.394642179133008 23.370277661399076 26.061360125165294 29 27.153140097408972 23.57354033831289 24.147425994055958 25.12589357022218 30 27.044369198339858 22.852833403160556 24.252657798609565 25.85013959989002 31 28.607728400476574 23.05893963000301 23.72120036266513 24.612131606855286 32 29.44064304324487 23.49117967635083 23.45615696068291 23.61202031972139 33 29.369963438903362 22.586869427460428 24.309590168763666 23.733576964872544 34 28.387854482252976 23.40345922963118 25.729319413713192 22.47936687440265 35 27.361455701174407 24.908147200146637 25.491074935518927 22.23932216316003 36 27.84663896489873 24.3816608622789 24.153092636719517 23.618607536102857 37 27.69273949645845 25.269012097566083 22.827732426452297 24.210515979523166 38 28.04061407585855 25.30593733225101 23.013749689050655 23.639698902839786 39 27.607126140693122 23.550444166590292 22.808564035926103 26.03386565679048 40 27.34335108472224 24.426257544613048 22.835547074457637 25.394844296207076 41 25.406484439440156 24.857679303211615 23.74198487149609 25.993851385852135 42 24.999938628418803 23.115933371738304 24.764067184697364 27.120060815145525 43 24.85528581154506 23.179002900011785 26.11837432409432 25.847336964348838 44 26.157468021314763 22.660965383155055 25.26923712669713 25.912329468833057 45 26.061073724453053 23.256965265321618 24.792625427146206 25.88933558307912 46 26.331661025936448 24.534721585776197 23.37942202699695 25.754195361290407 47 25.672121100040584 24.519460519252675 24.972976047081005 24.835442333625736 48 26.254066890113776 24.481573796462378 24.525761334921903 24.738597978501943 49 26.708707563597322 23.893511305463544 24.11892912318831 25.278852007750825 50 24.915614075858546 24.633795775016694 24.411385164770422 26.039204984354335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 26.5 2 53.0 3 56.5 4 60.0 5 157.5 6 255.0 7 2644.0 8 5033.0 9 10129.0 10 15225.0 11 16697.0 12 18169.0 13 17826.0 14 17483.0 15 16304.5 16 15126.0 17 16129.0 18 17132.0 19 17496.5 20 17861.0 21 20711.5 22 23562.0 23 29601.0 24 35640.0 25 40148.0 26 44656.0 27 49229.0 28 53802.0 29 61059.0 30 68316.0 31 77519.5 32 86723.0 33 95968.5 34 105214.0 35 115565.0 36 125916.0 37 130410.5 38 134905.0 39 143570.0 40 152235.0 41 167910.0 42 183585.0 43 193852.0 44 204119.0 45 224824.5 46 245530.0 47 258249.5 48 270969.0 49 276817.0 50 282665.0 51 297678.0 52 312691.0 53 344633.0 54 376575.0 55 401407.0 56 426239.0 57 413659.0 58 401079.0 59 389276.5 60 377474.0 61 334215.0 62 290956.0 63 238648.5 64 186341.0 65 160385.0 66 134429.0 67 114824.5 68 95220.0 69 79392.5 70 63565.0 71 59888.0 72 56211.0 73 41370.5 74 26530.0 75 18006.5 76 9483.0 77 7220.0 78 4957.0 79 3309.5 80 1662.0 81 1074.5 82 487.0 83 274.5 84 62.0 85 49.5 86 37.0 87 20.0 88 3.0 89 12.0 90 21.0 91 10.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4888256.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.044340545428271 #Duplication Level Percentage of deduplicated Percentage of total 1 61.79413874563507 4.352989570356971 2 10.329400282544418 1.4552762644057176 3 4.39850119791809 0.9295362098282767 4 2.1211514632399924 0.5976845302198392 5 1.1549717046023598 0.4068007003776403 6 0.73517598957143 0.3107298018818026 7 0.5566264427222501 0.2744746353388098 8 0.4123231398285356 0.2323635689369955 9 0.3550022661847047 0.22506811716634512 >10 9.986569629894683 20.78929052249077 >50 5.435221648589122 26.50101621759703 >100 2.5937414446902354 31.587134992797356 >500 0.08587354412008451 4.003121664515684 >1k 0.03595397521982777 4.664768718682739 >5k 0.002674262619656611 1.081094865570205 >10k+ 0.002674262619656611 2.5886496198338476 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACAATAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 20462 0.4185950981290669 No Hit ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 19848 0.4060343811780725 No Hit ACAATAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 15433 0.31571587085455427 No Hit ACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 14096 0.288364602835858 No Hit ACAATAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 12327 0.25217582712525694 No Hit ACAATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 10476 0.21430956152869246 No Hit ACAATAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 10467 0.21412544678511108 No Hit ACAATAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 10309 0.2108932101755718 No Hit ACAATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 10254 0.20976806452035246 No Hit ACAATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 9174 0.18767429529059035 No Hit ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 5831 0.11928589664698412 No Hit ACAATAGGGGACAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAA 5660 0.11578771651893846 No Hit ACAATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 5429 0.11106210476701713 No Hit ACAATAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 5248 0.10735935270165885 No Hit ACAATAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 5138 0.1051090613912201 No Hit ACAATAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 5081 0.1039430013485382 No Hit ACAATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5075 0.10382025818615065 No Hit ACAATAGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTC 5013 0.10255191217481245 No Hit ACAATAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 4995 0.10218368268764975 No Hit ACAATAGGGGAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGC 4925 0.10075167912646146 No Hit ACAATAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 4914 0.10052664999541758 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.05134755626546564 0.0 0.0 0.0 0.0 7 0.053536475994710585 0.0 0.0 0.0 0.0 8 0.06822474109375613 0.0 0.0 0.0 0.0 9 0.08847736288770473 0.0 0.0 0.0 0.0 10 0.12354099294308644 0.0 0.0 0.0 0.0 11 0.14880562720119406 0.0 0.0 0.0 0.0 12 0.16187777399546996 0.0 0.0 0.0 0.0 13 0.17139036908050642 0.0 0.0 0.0 9.205737179067545E-4 14 0.1833782846070255 0.0 0.0 0.0 9.205737179067545E-4 15 0.19602083033294493 0.0 0.0 0.0 9.205737179067545E-4 16 0.2102590371699027 0.0 0.0 0.0 9.205737179067545E-4 17 0.22349484151402874 0.0 0.0 0.0 9.205737179067545E-4 18 0.2356464145903979 0.0 0.0 0.0 9.205737179067545E-4 19 0.25195079799421305 0.0 0.0 0.0 9.205737179067545E-4 20 0.2628953966404378 0.0 0.0 0.0 9.205737179067545E-4 21 0.2740241100302439 0.0 0.0 0.0 9.205737179067545E-4 22 0.2845186504143809 0.0 0.0 0.0 9.205737179067545E-4 23 0.29673159507194385 0.0 0.0 0.0 9.205737179067545E-4 24 0.3093741407978633 0.0 0.0 0.0 9.205737179067545E-4 25 0.32109611280587597 0.0 0.0 0.0 9.205737179067545E-4 26 0.334413745924927 0.0 0.0 0.0 9.205737179067545E-4 27 0.34713812042577147 0.0 0.0 0.0 9.205737179067545E-4 28 0.36301290276123016 0.0 0.0 0.0 9.205737179067545E-4 29 0.3749394467065555 0.0 0.0 0.0 9.205737179067545E-4 30 0.38874805247515676 0.0 0.0 0.0 9.205737179067545E-4 31 0.400122252189738 0.0 0.0 0.0 9.205737179067545E-4 32 0.41315348459655143 0.0 0.0 0.0 9.205737179067545E-4 33 0.4249777425732204 0.0 0.0 0.0 9.205737179067545E-4 34 0.4381112609486901 0.0 0.0 0.0 9.205737179067545E-4 35 0.4531882127286296 0.0 0.0 0.0 9.205737179067545E-4 36 0.46501247070529855 0.0 0.0 0.0 9.205737179067545E-4 37 0.47753227326883046 0.0 0.0 0.0 9.205737179067545E-4 38 0.49023619057594364 0.0 0.0 0.0 9.205737179067545E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGGAT 56550 0.0 42.723965 5 ATAGGGA 172275 0.0 42.659122 4 AATAGGG 488755 0.0 42.576263 3 CAATAGG 498485 0.0 42.574482 2 ACAATAG 503145 0.0 42.57413 1 TAGGGGG 88145 0.0 42.51245 5 TAGGGGA 75310 0.0 42.498474 5 ATAGGGG 256810 0.0 42.44858 4 TAGGGAG 53175 0.0 42.407143 5 AGGGATA 8010 0.0 42.379528 6 ATAGGGT 23070 0.0 42.302555 4 ATAGGGC 37505 0.0 42.210907 4 AGGGATC 15300 0.0 41.88628 6 TAGGGAC 31865 0.0 41.845913 5 TAGGGGT 47060 0.0 41.830856 5 TAGGGGC 47460 0.0 41.821323 5 AGGGATT 19900 0.0 41.77789 6 TAGGGAA 32280 0.0 41.655514 5 TAGGGTG 9740 0.0 41.289528 5 AGGGGGT 18890 0.0 41.12335 6 >>END_MODULE