##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527769_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6175714 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.210599454573185 33.0 31.0 34.0 31.0 34.0 2 32.756005054638216 34.0 31.0 34.0 31.0 34.0 3 32.85664669704588 34.0 31.0 34.0 31.0 34.0 4 36.42502130118072 37.0 37.0 37.0 35.0 37.0 5 36.26294174244468 37.0 37.0 37.0 35.0 37.0 6 36.2234923767519 37.0 37.0 37.0 35.0 37.0 7 36.35711271603575 37.0 36.0 37.0 35.0 37.0 8 36.56913759283542 37.0 37.0 37.0 35.0 37.0 9 38.65344233881297 39.0 39.0 39.0 38.0 39.0 10 38.03132334172211 39.0 38.0 39.0 37.0 39.0 11 37.79592222049143 39.0 38.0 39.0 35.0 39.0 12 37.46514961670829 39.0 37.0 39.0 35.0 39.0 13 37.242729018863244 39.0 37.0 39.0 34.0 39.0 14 38.162563065582376 40.0 38.0 40.0 34.0 40.0 15 38.256222519371846 40.0 38.0 40.0 35.0 40.0 16 38.33074394312949 40.0 38.0 40.0 35.0 40.0 17 38.30837519354037 40.0 38.0 40.0 35.0 40.0 18 38.30738955851906 40.0 38.0 40.0 35.0 40.0 19 38.29025502152464 40.0 38.0 40.0 34.0 40.0 20 38.25483644482241 40.0 38.0 40.0 34.0 40.0 21 38.28778631912035 40.0 38.0 40.0 35.0 40.0 22 38.173860058934075 40.0 38.0 40.0 34.0 40.0 23 38.17315843965572 40.0 38.0 40.0 34.0 40.0 24 38.16475390537839 40.0 38.0 40.0 34.0 40.0 25 38.10934444179248 40.0 38.0 40.0 34.0 40.0 26 37.94950851027104 40.0 38.0 40.0 34.0 40.0 27 37.86310424997013 40.0 38.0 40.0 34.0 40.0 28 37.771684213355734 40.0 37.0 40.0 34.0 40.0 29 37.69150579188091 40.0 37.0 40.0 33.0 40.0 30 37.5946076842289 40.0 37.0 40.0 33.0 40.0 31 37.53109243724693 40.0 37.0 40.0 33.0 40.0 32 37.4469068677727 40.0 37.0 40.0 33.0 40.0 33 37.129789689095055 40.0 36.0 40.0 32.0 40.0 34 37.13489873397635 40.0 36.0 40.0 32.0 40.0 35 37.088725611322026 39.0 36.0 40.0 32.0 40.0 36 36.912795670265815 39.0 35.0 40.0 32.0 40.0 37 36.88247690874286 39.0 35.0 40.0 31.0 40.0 38 36.52287719282337 39.0 35.0 40.0 31.0 40.0 39 36.608276063302156 39.0 35.0 40.0 31.0 40.0 40 36.46226946390328 39.0 35.0 40.0 31.0 40.0 41 36.13693720272668 39.0 35.0 40.0 30.0 40.0 42 36.21479864514451 39.0 35.0 40.0 30.0 40.0 43 36.18682649487978 38.0 35.0 40.0 30.0 40.0 44 36.047909763956035 38.0 35.0 40.0 30.0 40.0 45 35.943863980747814 38.0 35.0 40.0 30.0 40.0 46 35.662197925616375 38.0 35.0 40.0 29.0 40.0 47 35.39787690945533 38.0 34.0 40.0 28.0 40.0 48 35.39727519765326 38.0 34.0 40.0 28.0 40.0 49 35.32635627232738 37.0 34.0 40.0 28.0 40.0 50 35.16982052601529 37.0 34.0 40.0 28.0 40.0 51 35.46182692397996 37.0 34.0 40.0 29.0 40.0 52 35.214393024029285 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 2.0 14 12.0 15 20.0 16 81.0 17 222.0 18 600.0 19 1216.0 20 2211.0 21 3918.0 22 6463.0 23 10423.0 24 15388.0 25 22041.0 26 30097.0 27 41011.0 28 54980.0 29 71284.0 30 92649.0 31 118686.0 32 156057.0 33 210391.0 34 344742.0 35 412165.0 36 582081.0 37 975898.0 38 2060176.0 39 962896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.65058291235637 0.305082133013284 0.03183437574991329 0.012500578880433906 8 99.00701360199 0.9115707106902942 0.05246356939456717 0.02895211792515003 9 97.84478361530343 1.0920194814721018 0.45071711546227694 0.6124797877621924 10 52.16146667413679 35.09220148471901 4.912597960333008 7.833733880811191 11 32.655543958156095 25.68193734360108 23.91365597564913 17.748862722593696 12 27.623720917127965 19.238698553721886 27.46440330624119 25.67317722290896 13 25.082767757703806 19.01702378057015 29.846589398408025 26.053619063318024 14 25.206154300539175 20.192677316339456 29.709811691409282 24.891356691712083 15 25.678796006421283 20.25288088146569 28.013214342503556 26.055108769609475 16 28.91510196229942 21.643813168809306 25.299633370327708 24.14145149856357 17 28.82374410473024 21.922760671883445 24.20333907949753 25.050156143888785 18 27.749811600731512 21.451479132615273 24.79914063377935 25.999568632873864 19 27.732032279992243 22.238319326315953 24.30533538308283 25.724313010608974 20 26.615950803421274 23.133114648767737 24.499078163269868 25.75185638454112 21 27.48621454944319 21.866993840712183 26.054121029568407 24.592670580276224 22 27.37186339911466 21.370403486949037 25.559797620161817 25.697935493774487 23 26.026059496926184 22.382917991344804 25.93139837758031 25.6596241341487 24 26.670292698139843 22.902631177544816 24.280334225321962 26.14674189899338 25 26.565041710156915 23.55967261437301 23.938819058006896 25.93646661746318 26 25.824949147580345 23.915858150166926 23.96148850157245 26.29770420068028 27 25.97808123886566 22.259466678670677 24.23076910621185 27.531682976251815 28 27.23369314058261 23.294812551228894 23.39408852158633 26.077405786602164 29 27.20168064777611 23.363598119990662 24.219110535235277 25.21561069699795 30 27.166607780088263 22.695205768919998 24.269031888458564 25.869154562533176 31 28.708729063554433 22.89678569959684 23.716739473362917 24.67774576348581 32 29.51308949863935 23.32682504403539 23.45162033086377 23.70846512646149 33 29.461306012551745 22.46198577200952 24.32058868011051 23.756119535328224 34 28.364995529261876 23.264807923423916 25.733445557873956 22.636750989440248 35 27.428974204440166 24.80114849878087 25.467209135656216 22.302668161122746 36 28.133896744570748 24.211856313294298 24.112062184226797 23.542184757908156 37 27.794308479958758 25.10998728244216 22.819871516070855 24.275832721528232 38 28.179397556298753 25.202559574488063 22.884333698095475 23.733709171117702 39 27.70568714807713 23.39161107525381 22.796586759037094 26.10611501763197 40 27.42931424609365 24.28350794742114 22.806771816181904 25.480405990303307 41 25.744618355059835 24.686505884177926 23.67611259200151 25.89276316876073 42 25.051581080341478 22.906209711136235 24.8149120895171 27.22729711900519 43 24.94276775122682 23.032235624901023 26.060662783283036 25.96433384058912 44 26.030059034469538 22.503244159298827 25.382975960350496 26.083720845881142 45 26.10605024779321 23.056297619999892 24.881187827026963 25.95646430517994 46 26.399749081644647 24.295830409244985 23.45128028921028 25.853140219900077 47 25.953420122758274 24.342157036417166 24.95669326655995 24.747729574264614 48 26.418807606699403 24.212584973980338 24.55377629210161 24.81483112721865 49 26.853656111665792 23.642157004032246 24.14324886158912 25.360938022712837 50 24.970489242215557 24.42020469212143 24.48520122531581 26.124104840347208 51 24.935529721745535 24.52535852534622 24.134262046461348 26.404849706446896 52 25.464780266702764 24.67112304747273 24.265453354867144 25.59864333095736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 32.5 2 65.0 3 69.0 4 73.0 5 151.0 6 229.0 7 2895.5 8 5562.0 9 11232.0 10 16902.0 11 18606.5 12 20311.0 13 20097.5 14 18610.5 15 17337.0 16 17467.0 17 17597.0 18 18653.0 19 19709.0 20 22097.0 21 24485.0 22 29310.0 23 34135.0 24 41013.0 25 47891.0 26 51702.5 27 55514.0 28 62733.5 29 69953.0 30 80983.5 31 92014.0 32 100429.5 33 108845.0 34 122787.5 35 136730.0 36 147053.5 37 157377.0 38 162417.5 39 180351.0 40 193244.0 41 208785.5 42 224327.0 43 244323.5 44 264320.0 45 275578.0 46 286836.0 47 303314.0 48 319792.0 49 335599.5 50 351407.0 51 365401.5 52 379396.0 53 423475.0 54 467554.0 55 485288.0 56 503022.0 57 489811.0 58 476600.0 59 472992.0 60 469384.0 61 423658.0 62 377932.0 63 332485.0 64 235391.5 65 183745.0 66 156130.0 67 128515.0 68 113581.5 69 98648.0 70 88659.5 71 78671.0 72 61264.0 73 43857.0 74 30340.0 75 16823.0 76 12540.0 77 8257.0 78 5748.5 79 3240.0 80 2013.5 81 787.0 82 489.0 83 191.0 84 111.0 85 31.0 86 23.0 87 15.0 88 10.5 89 5.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 6175714.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.157737805937902 #Duplication Level Percentage of deduplicated Percentage of total 1 67.96464148212013 5.5443772528570685 2 9.648860903000482 1.5742575474528633 3 4.2119020847456206 1.0307877861491404 4 1.9804850232093625 0.6462511019171527 5 1.1688272644937192 0.4767493182085696 6 0.6913699237044332 0.33840087386952344 7 0.49297943089517293 0.2815117858674312 8 0.32297222125132147 0.21077781596557163 9 0.2680207598377291 0.19677987767740007 >10 6.119151662732506 14.568483038858734 >50 4.491534701330957 25.89253632728849 >100 2.5159381430763923 35.78165729990826 >500 0.08621785249489582 4.708912754832936 >1k 0.03233169468558593 4.733783356175631 >5k 0.0026943078904654943 1.3528355992085044 >10k+ 0.002072544531127303 2.6618982637628714 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACAATAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 23976 0.38823041351979704 No Hit ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 23187 0.37545456282463857 No Hit ACAATAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 18781 0.3041105854319031 No Hit ACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 16208 0.2624473866503533 No Hit ACAATAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 14793 0.23953505618945437 No Hit ACAATAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 12844 0.20797595225426568 No Hit ACAATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 12764 0.20668055547909117 No Hit ACAATAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 12609 0.2041707242271906 No Hit ACAATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 11274 0.18255379054146614 No Hit ACAATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 11005 0.17819801888494188 No Hit ACAATAGGGGACAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGC 6979 0.11300717617428527 No Hit ACAATAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 6550 0.10606061096741203 No Hit ACAATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 6451 0.10445755745813359 No Hit ACAATAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 6343 0.10270877181164802 No Hit ACAATAGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 6322 0.10236873015816471 No Hit ACAATAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 6235 0.10095998616516243 No Hit ACAATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6214 0.10061994451167915 No Hit ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 6198 0.10036086515664423 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.04572750616365978 0.0 0.0 0.0 0.0 7 0.04723340491480014 0.0 0.0 0.0 0.0 8 0.0597663687146134 0.0 0.0 0.0 0.0 9 0.0785658144143333 0.0 0.0 0.0 0.0 10 0.10861901959838166 0.0 0.0 0.0 0.0 11 0.13123988578486634 0.0 0.0 0.0 0.0 12 0.14301180397926458 0.0 0.0 0.0 0.0 13 0.15156142269541628 0.0 0.0 0.0 9.715475813808736E-4 14 0.16080731717822425 0.0 0.0 0.0 9.715475813808736E-4 15 0.17219061634007016 0.0 0.0 0.0 9.715475813808736E-4 16 0.1843997309460898 0.0 0.0 0.0 9.715475813808736E-4 17 0.1969003098265237 0.0 0.0 0.0 9.715475813808736E-4 18 0.20847791850464578 0.0 0.0 0.0 9.715475813808736E-4 19 0.22361786831449773 0.0 0.0 0.0 9.715475813808736E-4 20 0.23377054053992785 0.0 0.0 0.0 9.715475813808736E-4 21 0.24351840127311594 0.0 0.0 0.0 9.715475813808736E-4 22 0.25308814494971754 0.0 0.0 0.0 9.715475813808736E-4 23 0.26367801358676907 0.0 0.0 0.0 9.715475813808736E-4 24 0.27439742190133803 0.0 0.0 0.0 9.715475813808736E-4 25 0.28516540759497605 0.0 0.0 0.0 9.715475813808736E-4 26 0.29750406187851314 0.0 0.0 0.0 9.877400410705547E-4 27 0.3082558551124615 0.0 0.0 0.0 9.877400410705547E-4 28 0.3225861819378294 0.0 0.0 0.0 9.877400410705547E-4 29 0.33345132238960545 0.0 0.0 0.0 9.877400410705547E-4 30 0.3443002703816919 0.0 0.0 0.0 9.877400410705547E-4 31 0.35489013901874344 0.0 0.0 0.0 9.877400410705547E-4 32 0.3672773706813496 0.0 0.0 0.0 9.877400410705547E-4 33 0.3774300429067797 0.0 0.0 0.0 9.877400410705547E-4 34 0.3899144293275239 0.0 0.0 0.0 9.877400410705547E-4 35 0.40288458953895856 0.0 0.0 0.0 9.877400410705547E-4 36 0.4141545414829767 0.0 0.0 0.0 9.877400410705547E-4 37 0.4254568783463742 0.0 0.0 0.0 9.877400410705547E-4 38 0.4361277092818741 0.0 0.0 0.0 9.877400410705547E-4 39 0.4470738120320986 0.0 0.0 0.0 9.877400410705547E-4 40 0.4589752699040143 0.0 0.0 0.0 9.877400410705547E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGGAT 70845 0.0 44.668926 5 ATAGGGA 215835 0.0 44.663704 4 CAATAGG 630280 0.0 44.502014 2 AATAGGG 617240 0.0 44.500923 3 ACAATAG 636315 0.0 44.497066 1 ATAGGGG 325780 0.0 44.287247 4 ATAGGGT 28775 0.0 44.28149 4 TAGGGGG 112500 0.0 44.27449 5 TAGGGAG 67095 0.0 44.272305 5 TAGGGGA 95120 0.0 44.266296 5 AGGGATA 10175 0.0 44.10123 6 ATAGGGC 48310 0.0 44.000412 4 TAGGGGT 60150 0.0 43.847218 5 TAGGGAC 40305 0.0 43.671753 5 AGGGATT 25680 0.0 43.536995 6 TAGGGGC 59740 0.0 43.505188 5 AGGGATC 18645 0.0 43.40949 6 TAGGGAA 40485 0.0 43.096947 5 TAGGGTA 7560 0.0 42.957672 5 TAGGGTG 11930 0.0 42.780388 5 >>END_MODULE