##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527765_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 381547 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.538615164055805 34.0 31.0 34.0 31.0 34.0 2 32.98139678728964 34.0 31.0 34.0 31.0 34.0 3 32.993712439096626 34.0 31.0 34.0 31.0 34.0 4 36.440753039599315 37.0 37.0 37.0 35.0 37.0 5 36.035633879967605 37.0 35.0 37.0 35.0 37.0 6 36.3690292414827 37.0 37.0 37.0 35.0 37.0 7 36.49952168409134 37.0 37.0 37.0 35.0 37.0 8 36.66407546121448 37.0 37.0 37.0 35.0 37.0 9 38.72229109388883 39.0 39.0 39.0 39.0 39.0 10 38.15956094530949 39.0 39.0 39.0 37.0 39.0 11 37.85753000285679 39.0 38.0 39.0 35.0 39.0 12 37.482320657743344 39.0 37.0 39.0 35.0 39.0 13 37.335313866967894 39.0 37.0 39.0 35.0 39.0 14 38.14134038532605 40.0 38.0 40.0 34.0 40.0 15 38.20147452345321 40.0 38.0 40.0 35.0 40.0 16 38.20803990071996 40.0 38.0 40.0 35.0 40.0 17 38.126736679884786 40.0 38.0 40.0 34.0 40.0 18 38.05451752995044 40.0 38.0 40.0 34.0 40.0 19 38.01919291725528 40.0 38.0 40.0 34.0 40.0 20 37.864525209214065 40.0 38.0 40.0 34.0 40.0 21 37.82841956561053 40.0 37.0 40.0 34.0 40.0 22 37.84208760650719 40.0 37.0 40.0 34.0 40.0 23 37.740419922054166 40.0 37.0 40.0 34.0 40.0 24 37.67140614393509 40.0 37.0 40.0 34.0 40.0 25 37.67082430211743 40.0 37.0 40.0 33.0 40.0 26 37.54407451768721 39.0 37.0 40.0 33.0 40.0 27 37.456232128676156 39.0 37.0 40.0 33.0 40.0 28 37.242772187961116 39.0 36.0 40.0 33.0 40.0 29 37.44081069959926 40.0 37.0 40.0 33.0 40.0 30 37.680511182108624 40.0 37.0 40.0 33.0 40.0 31 37.70502978663179 40.0 37.0 40.0 34.0 40.0 32 37.66549599394046 40.0 37.0 40.0 33.0 40.0 33 37.577386272202375 40.0 37.0 40.0 33.0 40.0 34 37.290108427008995 40.0 36.0 40.0 33.0 40.0 35 37.31038377971783 40.0 36.0 40.0 33.0 40.0 36 37.22332504252425 40.0 35.0 40.0 33.0 40.0 37 37.15320261986073 40.0 35.0 40.0 33.0 40.0 38 37.053458682678674 40.0 35.0 40.0 33.0 40.0 39 36.97297842729729 39.0 35.0 40.0 33.0 40.0 40 36.82012700925443 39.0 35.0 40.0 32.0 40.0 41 36.71249151480683 39.0 35.0 40.0 32.0 40.0 42 36.59071359491753 39.0 35.0 40.0 32.0 40.0 43 36.468209683210716 39.0 35.0 40.0 32.0 40.0 44 36.20221886163435 38.0 35.0 40.0 31.0 40.0 45 36.17516583802258 38.0 35.0 40.0 31.0 40.0 46 35.95813359821988 38.0 35.0 40.0 31.0 40.0 47 35.887819849192894 37.0 35.0 40.0 31.0 40.0 48 35.824194660159826 37.0 35.0 40.0 31.0 40.0 49 35.68416472937803 37.0 35.0 40.0 30.0 40.0 50 35.16018210076347 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 3.0 14 4.0 15 5.0 16 13.0 17 17.0 18 35.0 19 74.0 20 147.0 21 252.0 22 380.0 23 516.0 24 807.0 25 1221.0 26 1635.0 27 2105.0 28 2823.0 29 3682.0 30 4980.0 31 6323.0 32 8392.0 33 11600.0 34 21546.0 35 26480.0 36 38154.0 37 61053.0 38 132896.0 39 56402.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 98.92333054643333 0.9264913627940987 0.12161018170762711 0.028567909064938266 8 99.38644518237597 0.4728119995701709 0.12501736352271148 0.015725454531158676 9 96.953193184588 1.7394973620550025 0.5393830904187427 0.7679263629382488 10 47.373718047842075 39.046041509958144 5.192545086188596 8.387695356011186 11 32.614592697623095 24.298710250637537 23.581891614925553 19.504805436813815 12 27.30489297517737 19.67070898211754 27.341061520599037 25.68333652210606 13 24.025873614521934 19.345192073322554 30.49584979045832 26.133084521697196 14 24.961538159125872 19.964512890941354 30.46413679048715 24.609812159445628 15 25.04147588632593 22.495000615913636 27.619402065800543 24.84412143195989 16 28.337006974239088 23.48334543319696 24.636021250330888 23.54362634223307 17 28.661737610307515 23.3093170697188 23.13659916078491 24.892346159188776 18 27.36045624785413 22.811344342898778 24.282722705197525 25.54547670404957 19 28.069412156300533 23.734428523877792 23.43512070596807 24.7610386138536 20 28.568695337664824 22.81763452471124 24.19701897800271 24.416651159621225 21 29.256683973403014 21.08835870810149 25.69146134028049 23.963495978215004 22 27.763027883851795 21.637963343965488 25.762487976579557 24.83652079560316 23 26.743494248415008 23.460019342309074 25.334231431514336 24.462254977761585 24 26.38128461238065 23.57481516038653 25.045669340867573 24.998230886365246 25 26.5597685213093 25.038068704510845 23.30800661517454 25.094156159005315 26 25.400278340545203 26.449428248682338 21.84501516195908 26.305278248813384 27 26.156934794402787 24.004906341813722 23.846865523775577 25.991293340007914 28 26.26439206703237 25.27709561338446 23.06242743357961 25.39608488600356 29 26.78909806655537 24.121274705344295 24.49632679591243 24.59330043218791 30 27.51718661134801 22.320448070617775 24.725656341158494 25.43670897687572 31 27.710609702081264 24.625275523067934 24.24734043250242 23.416774342348386 32 28.775485064749557 24.497637250456695 23.35387252422375 23.373005160569996 33 29.29888060972829 23.304599433359456 23.097547615365865 24.29897234154639 34 27.01816552089258 26.02536515815876 24.23947770523684 22.716991615711827 35 27.249329702500606 25.511929067716427 24.925631704613064 22.3131095251699 36 26.637609521238538 25.67154243120769 24.047102978138998 23.643745069414777 37 26.654121248496253 26.881878248289205 23.109603797173087 23.35439670604146 38 26.902059248270856 26.42557797597675 23.623826160341977 23.048536615410423 39 26.06913433993715 25.02679879543018 22.96335707003331 25.940709794599353 40 26.2376587943294 25.650050976681772 22.72957197933675 25.382718249652076 41 24.871116795571712 26.225340521613326 23.98603579637633 24.91750688643863 42 25.22467743161393 25.948572521864932 23.36252152421589 25.46422852230525 43 25.143167158960754 25.12455870443222 25.17619061347619 24.556083523130834 44 25.38429079510519 25.069257522664312 24.301855341543767 25.24459634068673 45 25.195585340731284 25.07712024992989 24.040812796326534 25.68648161301229 46 25.99365215818759 24.369212705118898 24.084319887196074 25.552815249497442 47 24.618461159437764 24.91776897734748 25.158106340765357 25.305663522449397 48 26.66486697575921 24.27328743247883 24.54822079586525 24.513624795896703 49 24.236332614330607 26.01881288543744 25.129014249882715 24.615840250349237 50 24.31600825062181 25.591866794916484 25.298849158819227 24.79327579564248 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.0 6 6.0 7 4.5 8 3.0 9 3.5 10 4.0 11 114.0 12 224.0 13 557.0 14 890.0 15 1118.5 16 1347.0 17 1210.5 18 1074.0 19 1081.0 20 1088.0 21 1132.5 22 1177.0 23 1245.0 24 1313.0 25 1573.5 26 1834.0 27 1809.5 28 1785.0 29 2575.5 30 3366.0 31 3476.5 32 3587.0 33 4335.0 34 5083.0 35 6121.5 36 7160.0 37 7581.5 38 8003.0 39 9098.5 40 10194.0 41 11693.0 42 13192.0 43 14516.5 44 15841.0 45 15643.0 46 15445.0 47 18305.0 48 21165.0 49 21000.5 50 20836.0 51 22695.5 52 24555.0 53 24892.0 54 25229.0 55 24731.0 56 24233.0 57 28283.5 58 32334.0 59 30232.0 60 28130.0 61 29655.5 62 31181.0 63 27557.5 64 23934.0 65 21273.5 66 18613.0 67 15360.0 68 12107.0 69 10341.5 70 8576.0 71 8098.0 72 7620.0 73 5710.5 74 3801.0 75 4190.0 76 4579.0 77 2898.0 78 1217.0 79 910.0 80 603.0 81 354.5 82 106.0 83 100.5 84 95.0 85 53.5 86 12.0 87 7.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 381547.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.657001627584544 #Duplication Level Percentage of deduplicated Percentage of total 1 68.68316777940618 6.632734630333878 2 8.660370189437117 1.672664180297578 3 3.321934538348803 0.9623978173069111 4 1.5822613038050264 0.6111959994443672 5 0.7599196656353472 0.3669272723937025 6 0.537371763556424 0.31136399971694184 7 0.3826738316235141 0.25868372703756026 8 0.3962438256527167 0.3061221815398889 9 0.3229658578950225 0.2806993633811824 >10 8.758074146447376 25.171735068025697 >50 4.706073929327472 31.68128697119883 >100 1.8590891820007598 29.364403336941454 >500 0.018997991640883678 1.1324948171522775 >1k 0.010855995223362102 1.247290635229736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTGGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1363 0.3572299087661546 No Hit TTGGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1180 0.3092672724461207 No Hit TTGGACGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 1168 0.3061221815398889 No Hit TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1048 0.27467127247757156 No Hit TTGGACGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 913 0.23928899978246454 No Hit TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 629 0.16485518166831348 No Hit TTGGACGGGCTGGGGCTACAGAGCTGACTGACGTCACAGGATTCAAACCA 618 0.16197218167093438 No Hit TTGGACGGGGATATTACCTGTGAGAAACTCACTTTAAATACAATGGTGTG 577 0.15122645440797594 No Hit TTGGACGGGAGCGTAGAGCCGGGCGCGGTGGCGCGCGTCTTTAATCCCAG 551 0.14441209077780717 No Hit TTGGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 522 0.1368114544210805 No Hit TTGGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 511 0.1339284544237014 No Hit TTGGACGGGGCTTTCTGAGCCCCGGCGGTGCGCGCTACGGAGCTCGGCCA 482 0.1263278180669747 No Hit TTGGACGGGGGGAGCATGTAGAAGGGGAGGGAGGGAGAGAGGGAGGGAAG 476 0.12475527261385884 No Hit TTGGACGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 474 0.12423109079615355 No Hit TTGGACGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 471 0.12344481806959562 No Hit TTGGACGGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAA 455 0.1192513635279533 No Hit TTGGACGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGGCCT 428 0.11217490898893191 No Hit TTGGACGGGACAAATGTGAAGGCCGAGGTGGTAAGAAAGGAGCAGTAGAG 426 0.11165072717122661 No Hit TTGGACGGGAGAGGCTCCTTCCTGCAGTGTCAGCATCAGCCATGTTGGGT 406 0.10640890899417373 No Hit TTGGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 392 0.10273963627023669 No Hit TTGGACGGGATTTCTGTCTCATGCTTTGCAGTCTTAGCTCCCTTTTAAAG 385 0.10090499990826818 No Hit TTGGACGGGAGCGGTGAAATTGTGAACTCTTGGAAATGCTGTCAATCAAG 385 0.10090499990826818 No Hit TTGGACGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 382 0.10011872718171025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.05451490904135008 0.0 0.0 0.0 0.0 8 0.05661163631217124 0.0 0.0 0.0 0.0 9 0.057659999947581815 0.0 0.0 0.0 0.0 10 0.06709527266627703 0.0 0.0 0.0 0.0 11 0.07495799993185637 0.0 0.0 0.0 0.0 12 0.08622790901252009 0.0 0.0 0.0 0.0 13 0.09592527264006794 0.0 0.0 0.0 0.0 14 0.10405009081449992 0.0 0.0 0.0 0.0 15 0.11348536353319512 0.0 0.0 0.0 0.0 16 0.12554154534041678 0.0 0.0 0.0 0.0 17 0.13759772714763843 0.0 0.0 0.0 0.0 18 0.146770908957481 0.0 0.0 0.0 0.0 19 0.16118590894437645 0.0 0.0 0.0 0.0 20 0.17376627256930338 0.0 0.0 0.0 0.0 21 0.18398781801455652 0.0 0.0 0.0 0.0 22 0.19289890891554645 0.0 0.0 0.0 0.0 23 0.20574136344932603 0.0 0.0 0.0 0.0 24 0.2167491816211371 0.0 0.0 0.0 0.0 25 0.2277569997929482 0.0 0.0 0.0 0.0 26 0.24086154523558043 0.0 0.0 0.0 0.0 27 0.257373272493297 0.0 0.0 0.0 0.0 28 0.27205036338904515 0.0 0.0 0.0 0.0 29 0.2848928179228247 0.0 0.0 0.0 0.0 30 0.297211090638899 0.0 0.0 0.0 0.0 31 0.30638427244874156 0.0 0.0 0.0 0.0 32 0.3187025451648159 0.0 0.0 0.0 0.0 33 0.3281378178835111 0.0 0.0 0.0 0.0 34 0.3375730906022063 0.0 0.0 0.0 0.0 35 0.35460899967762816 0.0 0.0 0.0 0.0 36 0.3669272723937025 0.0 0.0 0.0 0.0 37 0.37793509056551355 0.0 0.0 0.0 0.0 38 0.3884187269196193 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTCCG 65 0.0 44.000004 27 GTTGAAC 20 7.849861E-4 44.0 33 CGGAATA 25 4.437231E-5 44.0 6 TAATAGC 20 7.849861E-4 44.0 17 TCGTTTA 20 7.849861E-4 44.0 31 AGTCCGC 20 7.849861E-4 44.0 35 GGTACGA 40 8.287316E-9 44.0 15 GTACCGC 20 7.849861E-4 44.0 18 TCCATAA 25 4.437231E-5 44.0 42 CGAACCC 30 2.5232548E-6 44.0 22 TCCGCGT 35 1.4426769E-7 44.0 29 CAACGTC 25 4.437231E-5 44.0 36 CCGATTA 20 7.849861E-4 44.0 37 CGCGGAA 30 2.5232548E-6 44.0 28 TCCGATT 25 4.437231E-5 44.0 36 ACGCACC 25 4.437231E-5 44.0 42 GCGAACC 20 7.849861E-4 44.0 9 CGGCCAA 20 7.849861E-4 44.0 18 GCAACCG 20 7.849861E-4 44.0 23 AGCTTAT 20 7.849861E-4 44.0 40 >>END_MODULE