Basic Statistics
Measure | Value |
---|---|
Filename | SRR1527763_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 585786 |
Sequences flagged as poor quality | 0 |
Sequence length | 52 |
%GC | 53 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TTGGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT | 1997 | 0.3409094788881947 | No Hit |
TTGGACGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA | 1715 | 0.2927690316941682 | No Hit |
TTGGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG | 1682 | 0.28713557510763316 | No Hit |
TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC | 1656 | 0.2826970941606662 | No Hit |
TTGGACGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG | 1269 | 0.2166320123731192 | No Hit |
TTGGACGGGCTGGGGCTACAGAGCTGACTGACGTCACAGGATTCAAACCAAT | 867 | 0.14800626850078358 | No Hit |
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT | 856 | 0.14612844963860522 | No Hit |
TTGGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT | 842 | 0.14373849835946914 | No Hit |
TTGGACGGGAGCGTAGAGCCGGGCGCGGTGGCGCGCGTCTTTAATCCCAGCA | 792 | 0.13520295807684035 | No Hit |
TTGGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC | 678 | 0.11574192623244667 | No Hit |
TTGGACGGGGCTTTCTGAGCCCCGGCGGTGCGCGCTACGGAGCTCGGCCAGC | 670 | 0.11437623978722605 | No Hit |
TTGGACGGGGATATTACCTGTGAGAAACTCACTTTAAATACAATGGTGTGTG | 666 | 0.11369339656461576 | No Hit |
TTGGACGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT | 654 | 0.11164486689678482 | No Hit |
TTGGACGGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGA | 637 | 0.10874278320069104 | No Hit |
TTGGACGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGGCCTCA | 616 | 0.10515785628198693 | No Hit |
TTGGACGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT | 601 | 0.10259719419719829 | No Hit |
TTGGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC | 600 | 0.10242648339154571 | No Hit |
TTGGACGGGGGGAGCATGTAGAAGGGGAGGGAGGGAGAGAGGGAGGGAAGAA | 594 | 0.10140221855763026 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACGTGC | 30 | 1.8598294E-6 | 46.0 | 46 |
TTAGGCG | 20 | 6.308907E-4 | 46.0 | 20 |
TAATAGT | 25 | 3.4150893E-5 | 46.0 | 35 |
TAATAGA | 25 | 3.4150893E-5 | 46.0 | 16 |
GGTACGA | 25 | 3.4150893E-5 | 46.0 | 15 |
GCCTTAA | 20 | 6.308907E-4 | 46.0 | 25 |
TCGCAAT | 20 | 6.308907E-4 | 46.0 | 43 |
CGTATTG | 25 | 3.4150893E-5 | 46.0 | 20 |
CGTATTA | 30 | 1.8598294E-6 | 46.0 | 40 |
GTCGAAT | 30 | 1.8598294E-6 | 46.0 | 22 |
ATAGGCG | 40 | 5.6024874E-9 | 46.0 | 10 |
CGACGTC | 20 | 6.308907E-4 | 46.0 | 36 |
CCGATTA | 50 | 1.6370905E-11 | 46.0 | 37 |
CACGGGT | 20 | 6.308907E-4 | 46.0 | 17 |
ACGCATA | 55 | 1.8189894E-12 | 46.0 | 33 |
CCGATGA | 30 | 1.8598294E-6 | 46.0 | 46 |
TCCGATT | 60 | 0.0 | 46.0 | 36 |
TCCGATA | 25 | 3.4150893E-5 | 46.0 | 21 |
CCGATAG | 25 | 3.4150893E-5 | 46.0 | 22 |
GCGCGAT | 25 | 3.4150893E-5 | 46.0 | 33 |