##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527763_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 585786 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22445910281229 33.0 31.0 34.0 31.0 34.0 2 32.772389575715366 34.0 31.0 34.0 31.0 34.0 3 32.629294657093205 34.0 31.0 34.0 31.0 34.0 4 36.30027860003482 37.0 37.0 37.0 35.0 37.0 5 35.82155770195942 37.0 35.0 37.0 35.0 37.0 6 36.17558801337007 37.0 37.0 37.0 35.0 37.0 7 36.396728498120474 37.0 37.0 37.0 35.0 37.0 8 36.57762561754634 37.0 37.0 37.0 35.0 37.0 9 38.61811822064713 39.0 39.0 39.0 38.0 39.0 10 37.88373057737809 39.0 38.0 39.0 35.0 39.0 11 37.60665499004756 39.0 37.0 39.0 35.0 39.0 12 37.227214375215524 39.0 37.0 39.0 34.0 39.0 13 36.954025872929705 39.0 37.0 39.0 33.0 39.0 14 37.93913306224457 40.0 38.0 40.0 33.0 40.0 15 38.025729532627956 40.0 38.0 40.0 34.0 40.0 16 38.063113491957814 40.0 38.0 40.0 34.0 40.0 17 38.027960722857834 40.0 38.0 40.0 34.0 40.0 18 38.03269965482275 40.0 38.0 40.0 34.0 40.0 19 37.97411170632279 40.0 38.0 40.0 34.0 40.0 20 37.90907259647721 40.0 38.0 40.0 34.0 40.0 21 37.929776402986754 40.0 38.0 40.0 34.0 40.0 22 37.77643542180933 40.0 37.0 40.0 33.0 40.0 23 37.72939605931176 40.0 37.0 40.0 33.0 40.0 24 37.71327413082593 40.0 37.0 40.0 33.0 40.0 25 37.68027743920135 40.0 37.0 40.0 33.0 40.0 26 37.47325473807841 40.0 37.0 40.0 33.0 40.0 27 37.41481189376325 40.0 36.0 40.0 33.0 40.0 28 37.26239957936858 39.0 36.0 40.0 33.0 40.0 29 37.1581208837357 39.0 36.0 40.0 32.0 40.0 30 37.11738757839894 39.0 36.0 40.0 32.0 40.0 31 37.0208233040735 39.0 35.0 40.0 32.0 40.0 32 36.90623538288727 39.0 35.0 40.0 32.0 40.0 33 36.60504860136637 39.0 35.0 40.0 31.0 40.0 34 36.595179809691594 39.0 35.0 40.0 31.0 40.0 35 36.610588167009794 39.0 35.0 40.0 31.0 40.0 36 36.378095413683496 38.0 35.0 40.0 31.0 40.0 37 36.34053903643993 38.0 35.0 40.0 31.0 40.0 38 35.96732424469004 38.0 35.0 40.0 30.0 40.0 39 36.0483691996736 38.0 35.0 40.0 30.0 40.0 40 35.960200482770155 38.0 35.0 40.0 30.0 40.0 41 35.63828258101081 38.0 34.0 40.0 29.0 40.0 42 35.653539005711984 38.0 34.0 40.0 29.0 40.0 43 35.58756098643532 38.0 34.0 40.0 29.0 40.0 44 35.49228216447645 37.0 34.0 40.0 29.0 40.0 45 35.36642220879297 37.0 34.0 40.0 29.0 40.0 46 35.00783904019556 37.0 34.0 40.0 28.0 40.0 47 34.7474299488209 36.0 33.0 40.0 27.0 40.0 48 34.76878928482415 36.0 33.0 39.0 28.0 40.0 49 34.6581208837357 36.0 33.0 39.0 27.0 40.0 50 34.56158050892305 36.0 33.0 39.0 27.0 40.0 51 34.92122037740745 36.0 34.0 39.0 28.0 40.0 52 34.60463548121669 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 2.0 16 12.0 17 42.0 18 72.0 19 144.0 20 309.0 21 496.0 22 738.0 23 1163.0 24 1765.0 25 2462.0 26 3421.0 27 4585.0 28 6284.0 29 7885.0 30 10102.0 31 12921.0 32 16997.0 33 23754.0 34 38901.0 35 48130.0 36 69739.0 37 103725.0 38 179220.0 39 52916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.03753247773078 0.8508226553724397 0.08501398121498295 0.026630885681801886 8 99.41275482855514 0.4597241996223877 0.11113273447982709 0.016388237342647317 9 96.89340475873442 1.7209356317836206 0.5725640421587406 0.8130955673232205 10 47.392733865268205 39.01151615094932 5.170488881605228 8.425261102177245 11 32.500435312554416 24.418302929738847 23.607085181277803 19.474176576428935 12 27.38576886439758 19.62354853137494 27.261832819493808 25.728849784733676 13 24.31843710843209 19.287248244239365 30.42732328870953 25.96699135861902 14 25.217058789387252 19.727340701211705 30.50892305381146 24.54667745558958 15 25.037641732646392 22.503098401122596 27.6887805444309 24.770479321800114 16 28.380842150546442 23.471711512395313 24.587135916529245 23.560310420529 17 28.83681071244448 23.126875684977108 23.15794505160588 24.87836855097254 18 27.428958698227678 22.859713274130826 24.271662347683286 25.43966567995821 19 28.37606224798817 23.512340684140625 23.28068612087008 24.830910947001122 20 28.391426220496907 22.908707275353116 24.21720560068011 24.48266090346987 21 29.467587139330746 20.984284363231623 25.671149532423104 23.87697896501453 22 27.914972361920565 21.729607740710772 25.619594869116025 24.735825028252638 23 26.78964673105878 23.492538230684925 25.243177542652095 24.474637495604195 24 26.442933084778403 23.454811142635705 25.143311721345334 24.958944051240557 25 26.681586791080704 24.887245512866475 23.290416636792273 25.140751059260545 26 25.583574889123334 26.39581690241829 21.63742390565838 26.3831843028 27 26.147432680193788 23.786843659629966 23.92426585818029 26.141457801995948 28 26.380111508298253 25.069223231692117 23.21188966619209 25.338775593817537 29 26.861345269432864 23.999207901861773 24.39747621144923 24.741970617256133 30 27.63978654320861 21.916536072900342 24.856858989460314 25.586818394430733 31 27.961405701058066 24.577063978995742 24.116827646956395 23.344702672989794 32 28.75418668250863 24.492220708586412 23.36040806710983 23.393184541795126 33 29.430372183698484 23.24654395973956 23.084197983563964 24.23888587299799 34 26.995523962675787 25.94326255663331 24.13680081121775 22.924412669473153 35 27.150187952597022 25.39408589484897 24.944945765177042 22.51078038737696 36 26.85127333189936 25.46868651691915 24.008084863755705 23.67195528742578 37 26.68090394785809 26.82464244621756 23.09478205351442 23.399671552409927 38 26.933214518612598 26.39598761322394 23.56440747986466 23.1063903882988 39 26.12899591318331 24.854298327375528 22.930216836865338 26.086488922575825 40 26.24081149088575 25.50573076174576 22.77589426855541 25.47756347881308 41 25.293366519513956 26.079831201155372 23.86827271392625 24.75852956540443 42 25.22747214853206 25.822740727842593 23.248080356990435 25.701706766634913 43 25.223887221613357 24.821692563495883 25.267247766249106 24.687172448641654 44 25.294902916764826 24.965772483466658 24.369479639322208 25.369844960446308 45 25.195549227875023 24.92685041977787 24.20986503603705 25.667735316310054 46 26.084098971296687 24.146019194722985 24.175040031683924 25.594841802296404 47 24.85737112187727 24.680685438026856 25.197768468348507 25.264174971747362 48 26.606303325787916 23.980088291628686 24.65644450362419 24.75716387895921 49 24.240934402665822 25.746262286910238 25.217741632609865 24.795061677814083 50 24.38399005780268 25.66022404086134 25.118900076137017 24.836885825198962 51 25.914071008866717 24.408401703011 24.17589358571219 25.501633702410093 52 24.249811364559754 26.196085259804775 26.029300802682208 23.524802572953263 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 4.0 6 8.0 7 4.5 8 1.0 9 2.0 10 3.0 11 148.5 12 294.0 13 755.5 14 1562.0 15 1907.0 16 1748.0 17 1589.0 18 1531.5 19 1474.0 20 1544.5 21 1615.0 22 1520.5 23 1426.0 24 1756.5 25 2087.0 26 2423.0 27 2759.0 28 3261.5 29 3764.0 30 4403.5 31 5043.0 32 5190.5 33 5338.0 34 6815.0 35 8292.0 36 9622.0 37 10952.0 38 12612.0 39 15707.0 40 17142.0 41 18450.0 42 19758.0 43 20806.0 44 21854.0 45 23610.5 46 25367.0 47 28090.5 48 30814.0 49 30750.0 50 30686.0 51 32192.5 52 33699.0 53 35863.5 54 38028.0 55 38574.5 56 39121.0 57 40509.5 58 41898.0 59 44353.0 60 46808.0 61 45671.5 62 44535.0 63 41798.5 64 34312.0 65 29562.0 66 24855.0 67 20148.0 68 16563.0 69 12978.0 70 12000.0 71 11022.0 72 10401.5 73 9781.0 74 8108.5 75 6436.0 76 4926.0 77 3416.0 78 2165.5 79 915.0 80 719.5 81 524.0 82 313.0 83 102.0 84 92.0 85 82.0 86 44.0 87 6.0 88 3.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 585786.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.94753715520685 #Duplication Level Percentage of deduplicated Percentage of total 1 74.1923500078586 8.864158583510019 2 9.89326589223713 2.3640032366768753 3 3.5406575506879845 1.2690641292212514 4 1.6417334647863175 0.7845868627792402 5 0.8687327646562933 0.5189608491838317 6 0.5129524054467258 0.3677110753756491 7 0.3057710717704717 0.2557247868675591 8 0.22861388543586666 0.21850983123529755 9 0.13716833126152 0.14749413608382583 >10 3.37777015731493 11.571290539548572 >50 3.194879048966236 27.673757993533478 >100 2.0603826424907483 41.7005527615887 >500 0.0385785931673025 2.84404202217192 >1k 0.007144183919870833 1.4201431922237815 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTGGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1997 0.3409094788881947 No Hit TTGGACGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1715 0.2927690316941682 No Hit TTGGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1682 0.28713557510763316 No Hit TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1656 0.2826970941606662 No Hit TTGGACGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 1269 0.2166320123731192 No Hit TTGGACGGGCTGGGGCTACAGAGCTGACTGACGTCACAGGATTCAAACCAAT 867 0.14800626850078358 No Hit TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 856 0.14612844963860522 No Hit TTGGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 842 0.14373849835946914 No Hit TTGGACGGGAGCGTAGAGCCGGGCGCGGTGGCGCGCGTCTTTAATCCCAGCA 792 0.13520295807684035 No Hit TTGGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 678 0.11574192623244667 No Hit TTGGACGGGGCTTTCTGAGCCCCGGCGGTGCGCGCTACGGAGCTCGGCCAGC 670 0.11437623978722605 No Hit TTGGACGGGGATATTACCTGTGAGAAACTCACTTTAAATACAATGGTGTGTG 666 0.11369339656461576 No Hit TTGGACGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 654 0.11164486689678482 No Hit TTGGACGGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGA 637 0.10874278320069104 No Hit TTGGACGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGGCCTCA 616 0.10515785628198693 No Hit TTGGACGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 601 0.10259719419719829 No Hit TTGGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 600 0.10242648339154571 No Hit TTGGACGGGGGGAGCATGTAGAAGGGGAGGGAGGGAGAGAGGGAGGGAAGAA 594 0.10140221855763026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.047457603971416185 0.0 0.0 0.0 0.0 8 0.04882329041663679 0.0 0.0 0.0 0.0 9 0.0495061336392471 0.0 0.0 0.0 0.0 10 0.05872451714448621 0.0 0.0 0.0 0.0 11 0.06657721420450471 0.0 0.0 0.0 0.0 12 0.07630773012670156 0.0 0.0 0.0 0.0 13 0.08518469202063553 0.0 0.0 0.0 0.0 14 0.09286667827500145 0.0 0.0 0.0 0.0 15 0.10157292936328284 0.0 0.0 0.0 0.0 16 0.11488837220418378 0.0 0.0 0.0 0.0 17 0.12752097182247443 0.0 0.0 0.0 0.0 18 0.13708077693901868 0.0 0.0 0.0 0.0 19 0.1519326170307928 0.0 0.0 0.0 0.0 20 0.16302881939821026 0.0 0.0 0.0 0.0 21 0.1722472029034494 0.0 0.0 0.0 0.0 22 0.18197771882564623 0.0 0.0 0.0 0.0 23 0.1929032103874111 0.0 0.0 0.0 0.0 24 0.20348728033787084 0.0 0.0 0.0 0.0 25 0.21304708545441509 0.0 0.0 0.0 0.0 26 0.22397257701617998 0.0 0.0 0.0 0.0 27 0.23780015227403864 0.0 0.0 0.0 0.0 28 0.24906706544710866 0.0 0.0 0.0 0.0 29 0.2618703758710519 0.0 0.0 0.0 0.0 30 0.27074733776498583 0.0 0.0 0.0 0.0 31 0.27928287804761465 0.0 0.0 0.0 0.0 32 0.29072050202633726 0.0 0.0 0.0 0.0 33 0.2989146206976609 0.0 0.0 0.0 0.0 34 0.31018153387073094 0.0 0.0 0.0 0.0 35 0.3233262659059793 0.0 0.0 0.0 0.0 36 0.33732455196949057 0.0 0.0 0.0 0.0 37 0.3487621759482132 0.0 0.0 0.0 0.0 38 0.3612240647608512 0.0 0.0 0.0 0.0 39 0.37300311035087896 0.0 0.0 0.0 0.0 40 0.38614784238612737 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTGC 30 1.8598294E-6 46.0 46 TTAGGCG 20 6.308907E-4 46.0 20 TAATAGT 25 3.4150893E-5 46.0 35 TAATAGA 25 3.4150893E-5 46.0 16 GGTACGA 25 3.4150893E-5 46.0 15 GCCTTAA 20 6.308907E-4 46.0 25 TCGCAAT 20 6.308907E-4 46.0 43 CGTATTG 25 3.4150893E-5 46.0 20 CGTATTA 30 1.8598294E-6 46.0 40 GTCGAAT 30 1.8598294E-6 46.0 22 ATAGGCG 40 5.6024874E-9 46.0 10 CGACGTC 20 6.308907E-4 46.0 36 CCGATTA 50 1.6370905E-11 46.0 37 CACGGGT 20 6.308907E-4 46.0 17 ACGCATA 55 1.8189894E-12 46.0 33 CCGATGA 30 1.8598294E-6 46.0 46 TCCGATT 60 0.0 46.0 36 TCCGATA 25 3.4150893E-5 46.0 21 CCGATAG 25 3.4150893E-5 46.0 22 GCGCGAT 25 3.4150893E-5 46.0 33 >>END_MODULE