##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527759_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 488071 Sequences flagged as poor quality 0 Sequence length 50 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.90735978986664 33.0 31.0 34.0 3.0 34.0 2 30.343269729199235 34.0 31.0 34.0 16.0 34.0 3 32.199845924056135 34.0 31.0 34.0 28.0 34.0 4 36.066219873747876 37.0 35.0 37.0 35.0 37.0 5 36.18013772586365 37.0 35.0 37.0 35.0 37.0 6 36.23200517957428 37.0 37.0 37.0 35.0 37.0 7 36.55291340809022 37.0 37.0 37.0 35.0 37.0 8 36.67682160997068 37.0 37.0 37.0 35.0 37.0 9 38.76416750841578 39.0 39.0 39.0 39.0 39.0 10 38.29425431955597 39.0 39.0 39.0 37.0 39.0 11 37.964839132011534 39.0 38.0 39.0 35.0 39.0 12 37.09860655519381 39.0 37.0 39.0 34.0 39.0 13 36.99087018077288 39.0 37.0 39.0 33.0 39.0 14 37.716020824839006 40.0 37.0 40.0 33.0 40.0 15 37.70310057348214 40.0 36.0 40.0 33.0 40.0 16 37.65923605377087 40.0 36.0 40.0 33.0 40.0 17 37.52767322787054 40.0 36.0 40.0 33.0 40.0 18 37.37684886010437 40.0 36.0 40.0 33.0 40.0 19 37.29057657594899 39.0 35.0 40.0 33.0 40.0 20 37.08480118671259 39.0 35.0 40.0 32.0 40.0 21 36.97809949781897 39.0 35.0 40.0 32.0 40.0 22 36.99588584447755 39.0 35.0 40.0 32.0 40.0 23 36.861686107144244 39.0 35.0 40.0 32.0 40.0 24 36.74069551356258 38.0 35.0 40.0 32.0 40.0 25 36.66574125485841 38.0 35.0 40.0 32.0 40.0 26 36.491858766449965 38.0 35.0 40.0 32.0 40.0 27 36.29054584271551 38.0 35.0 40.0 32.0 40.0 28 35.97732092257069 37.0 34.0 40.0 31.0 40.0 29 36.04319863298578 37.0 35.0 40.0 31.0 40.0 30 36.20285982981984 37.0 35.0 40.0 32.0 40.0 31 36.14151219802037 37.0 35.0 40.0 32.0 40.0 32 36.09076548289081 37.0 35.0 40.0 32.0 40.0 33 35.88419102958381 36.0 35.0 40.0 32.0 40.0 34 35.43999336162157 36.0 34.0 40.0 31.0 40.0 35 35.36284270116438 35.0 34.0 40.0 30.0 40.0 36 35.36412939920626 35.0 34.0 40.0 31.0 40.0 37 35.319973938218006 35.0 34.0 40.0 31.0 40.0 38 35.25722077320718 35.0 34.0 39.0 31.0 40.0 39 35.121814244239054 35.0 34.0 39.0 31.0 40.0 40 34.89550085950609 35.0 34.0 39.0 30.0 40.0 41 34.764747342087524 35.0 34.0 39.0 30.0 40.0 42 34.66221922630109 35.0 34.0 39.0 30.0 40.0 43 34.57115255772214 35.0 34.0 38.0 30.0 40.0 44 34.226614570421106 35.0 34.0 37.0 29.0 40.0 45 34.25684992552313 35.0 34.0 37.0 29.0 40.0 46 34.00221484169312 35.0 34.0 37.0 29.0 40.0 47 34.01162535778606 35.0 34.0 37.0 29.0 40.0 48 33.93314702164234 35.0 34.0 37.0 29.0 40.0 49 33.881324643340825 35.0 34.0 36.0 29.0 40.0 50 33.38833489389863 35.0 33.0 36.0 27.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 4.0 14 5.0 15 10.0 16 23.0 17 43.0 18 110.0 19 186.0 20 357.0 21 524.0 22 814.0 23 1117.0 24 1563.0 25 2093.0 26 2816.0 27 3906.0 28 5380.0 29 7171.0 30 9616.0 31 12753.0 32 17567.0 33 28379.0 34 53765.0 35 70534.0 36 84209.0 37 79221.0 38 77576.0 39 28328.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.04952353243688 0.7277629689123098 0.1628861374677045 0.05982736118310656 8 99.57547160146783 0.24545609142932073 0.06966199589813776 0.10941031120472225 9 98.74608407383352 0.653798320326346 0.22086950464174268 0.3792481011983912 10 62.76218009265045 28.653413130466674 2.7645567960399204 5.819849980842951 11 41.43372583087297 22.639943778671544 19.20970514535795 16.71662524509754 12 34.73183204902565 14.36102534262433 25.039184872692704 25.86795773565731 13 27.05344099526503 15.401652628408572 27.868896123719704 29.676010252606687 14 26.798560045567143 16.29885815793194 29.923310338045077 26.979271458455838 15 27.97523311157598 17.56301849525991 28.629236320125557 25.832512073038554 16 34.34561774823745 18.70793388666813 24.399933616215673 22.54651474887875 17 33.183081969631466 19.905710439669637 23.168555394604475 23.742652196094422 18 31.29134900455057 20.984242046751394 22.688092511130552 25.036316437567486 19 31.55626947718672 21.52842516764979 21.998848528185448 24.91645682697804 20 31.642527419166473 22.865115936001114 21.822644656207807 23.669711988624606 21 31.449727601107213 21.790886981607187 23.69819145165355 23.06119396563205 22 31.790251828115174 18.773907894548127 25.642990466550973 23.792849810785725 23 32.32152699095009 20.23783424952517 23.55456480716945 23.88607395235529 24 31.25569845370858 19.429959985330004 22.848315101696272 26.466026459265144 25 29.582376334590666 20.609091710017598 21.4927746168078 28.315757338583936 26 26.546342642771236 20.984651823197854 23.534895537739388 28.934109996291525 27 27.232513302367895 19.23162818524354 22.897898051717885 30.637960460670683 28 28.495239422133256 22.37871129405353 21.195891581347794 27.93015770246542 29 31.07908480528448 21.93922605522557 21.04693784305972 25.934751296430232 30 29.642408583997 18.96527349504478 23.634061437782616 27.758256483175604 31 32.61287804438289 20.2380391377484 20.569548282934242 26.579534534934467 32 34.83898858977485 19.717418162521437 22.553890724915025 22.889702522788692 33 34.17330675250117 18.642984319904276 24.947804725132205 22.235904202462347 34 28.651569136457606 21.067426665382698 28.52740687318034 21.753597324979356 35 27.320615238356716 26.25949913024949 26.72357095586503 19.696314675528765 36 29.97903993476359 26.37935874083894 22.640353555118008 21.00124776927947 37 30.069600529431167 26.839537690213106 20.070235682923183 23.020626097432544 38 31.235824296055288 26.47401709997111 20.870324194635618 21.419834409337984 39 31.41878947939951 22.911010898004594 21.126229585449657 24.543970037146234 40 28.641324725296112 23.573414523706592 20.26180617164306 27.523454579354233 41 26.627683267393476 24.349940889747597 21.095906128411645 27.926469714447283 42 24.692718887211083 22.44570974304968 21.895175087231163 30.96639628250808 43 25.371513570771466 20.43063406758443 24.412431797832692 29.78542056381141 44 28.338704819585676 19.32239366813435 23.397005763505717 28.941895748774254 45 28.73147554351723 22.320727926879492 22.593229263775147 26.354567265828127 46 27.767681341444174 22.594868369560984 21.993316546158244 27.644133742836598 47 26.143532395901413 22.7262017206513 24.320232097379275 26.81003378606801 48 28.532529078761083 20.80885772766667 25.131179684922888 25.527433508649356 49 28.085872752120082 21.108609198251894 24.09895281629107 26.706565233336953 50 26.577075876255705 21.111067856930653 24.508729262750705 27.803127004062933 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 3.5 8 7.0 9 4.0 10 1.0 11 1.0 12 1.0 13 19.0 14 37.0 15 249.5 16 462.0 17 701.0 18 940.0 19 753.0 20 566.0 21 579.0 22 592.0 23 692.5 24 793.0 25 718.0 26 643.0 27 847.0 28 1051.0 29 1517.5 30 1984.0 31 2065.5 32 2147.0 33 2720.0 34 3293.0 35 3234.0 36 3175.0 37 5144.0 38 7113.0 39 6720.5 40 6328.0 41 6625.5 42 6923.0 43 8675.5 44 10428.0 45 11109.0 46 11790.0 47 12585.0 48 13380.0 49 14687.0 50 15994.0 51 17011.5 52 18029.0 53 20147.0 54 22265.0 55 23877.5 56 25490.0 57 28218.5 58 30947.0 59 37746.0 60 44545.0 61 48259.0 62 51973.0 63 50141.0 64 48309.0 65 49370.5 66 50432.0 67 43945.5 68 37459.0 69 30374.5 70 23290.0 71 20642.5 72 17995.0 73 14080.0 74 10165.0 75 8376.5 76 6588.0 77 7413.5 78 8239.0 79 5685.5 80 3132.0 81 2062.0 82 992.0 83 702.5 84 413.0 85 259.5 86 106.0 87 63.5 88 21.0 89 18.5 90 16.0 91 14.5 92 13.0 93 7.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 488071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.518082410141147 #Duplication Level Percentage of deduplicated Percentage of total 1 68.48132601442256 6.518109045610167 2 9.62652028845119 1.832520268567483 3 3.5625874502206436 1.0172700283360414 4 1.651060165751803 0.6285970688690785 5 0.9363900548918308 0.44563188552485195 6 0.6156495533311807 0.35158819106236594 7 0.4972554084597998 0.33130425696261406 8 0.38531912603594876 0.2933999356650979 9 0.3035195350339038 0.26000315527863777 >10 7.7666559035625875 21.431308149838856 >50 4.161016037025078 27.435967308035103 >100 1.935206113443117 32.19060341630623 >500 0.05812076202776881 3.832843991960186 >1k 0.019373587342589604 3.430853297983285 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3644 0.746612685449453 No Hit ACGAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 2678 0.5486906618094499 No Hit ACGAGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2545 0.5214405281198842 No Hit ACGAGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1692 0.34667087370485034 No Hit ACGAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1643 0.3366313507665893 No Hit ACGAGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1241 0.25426628502820287 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1154 0.23644100960720876 No Hit ACGAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1108 0.22701615133863723 No Hit ACGAGCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 1040 0.21308375215900965 No Hit ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 987 0.20222467632782937 No Hit ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 965 0.1977171354167734 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTTAGCGGTTAAGAGCACTGACTGCT 965 0.1977171354167734 No Hit ACGAGCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 943 0.1932095945057174 No Hit ACGAGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 869 0.17804786598671096 No Hit ACGAGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 851 0.17435987796857425 No Hit ACGAGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 828 0.16964744883428845 No Hit ACGAGCGGGGGGCTGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGAC 777 0.15919814944956778 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 775 0.15878837300310816 No Hit ACGAGCGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 745 0.15264172630621364 No Hit ACGAGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 741 0.15182217341329438 No Hit ACGAGCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 688 0.14096309758211406 No Hit ACGAGCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 679 0.13911910357304572 No Hit ACGAGCGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 628 0.12866980418832505 No Hit ACGAGCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 621 0.12723558662571635 No Hit ACGAGCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 619 0.1268258101792567 No Hit ACGAGCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 596 0.12211338104497092 No Hit ACGAGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 578 0.1184253930268342 No Hit ACGAGCGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAAC 569 0.11658139901776585 No Hit ACGAGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 568 0.11637651079453604 No Hit ACGAGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCT 553 0.11330318744608879 No Hit ACGAGCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 542 0.11104941699056081 No Hit ACGAGCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 539 0.11043475232087134 No Hit ACGAGCGGGGGCTGTTGAGCTGGGAGGCGCGGTTGGAAGTCGTTACTTTG 529 0.10838587008857319 No Hit ACGAGCGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTG 527 0.10797609364211354 No Hit ACGAGCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 522 0.10695165252596446 No Hit ACGAGCGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGG 503 0.10305877628459795 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACCGACTGCT 500 0.10244411161490848 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005327093803975241 0.0 0.0 0.0 0.0 8 0.00676131136658396 0.0 0.0 0.0 0.0 9 0.009015081822111947 0.0 0.0 0.0 0.0 10 0.01352262273316792 0.0 0.0 0.0 0.0 11 0.0217181516623606 0.0 0.0 0.0 0.0 12 0.02704524546633584 0.0 0.0 0.0 0.0 13 0.03585543906521797 0.0 0.0 0.0 0.0 14 0.03995320352981431 0.0 0.0 0.0 0.0 15 0.04814873245900699 0.0 0.0 0.0 0.0 16 0.053885602709441864 0.0 0.0 0.0 0.0 17 0.06535934321031162 0.0 0.0 0.0 0.0 18 0.07334998391627448 0.0 0.0 0.0 0.0 19 0.08236506573838642 0.0 0.0 0.0 0.0 20 0.08953615355143002 0.0 0.0 0.0 0.0 21 0.09732190603416306 0.0 0.0 0.0 0.0 22 0.10551743496335574 0.0 0.0 0.0 0.0 23 0.1147374050086975 0.0 0.0 0.0 0.0 24 0.12170360459851129 0.0 0.0 0.0 0.0 25 0.13235779220646177 0.0 0.0 0.0 0.0 26 0.1409630975821141 0.0 0.0 0.0 0.0 27 0.14915862651130676 0.0 0.0 0.0 0.0 28 0.15837859655664852 0.0 0.0 0.0 0.0 29 0.169032784164599 0.0 0.0 0.0 0.0 30 0.1762038719776426 0.0 0.0 0.0 0.0 31 0.18276029512099673 0.0 0.0 0.0 0.0 32 0.19279981805925778 0.0 0.0 0.0 0.0 33 0.19956112942584173 0.0 0.0 0.0 0.0 34 0.21042020525702204 0.0 0.0 0.0 0.0 35 0.22250861042758124 0.0 0.0 0.0 0.0 36 0.23603123316074914 0.0 0.0 0.0 0.0 37 0.24996363234037672 0.0 0.0 0.0 0.0 38 0.2620520375109359 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 30 2.5247118E-6 44.0 17 AAACTCG 25 4.4390632E-5 44.0 19 CGGGTAT 50 2.7284841E-11 44.0 6 TCGTTTG 25 4.4390632E-5 44.0 40 TGATAGG 25 4.4390632E-5 44.0 41 TGATAAC 25 4.4390632E-5 44.0 29 TCGCAAG 20 7.8520266E-4 44.0 36 ACACGAA 25 4.4390632E-5 44.0 39 ATTAGTG 25 4.4390632E-5 44.0 37 GTATTGA 30 2.5247118E-6 44.0 15 GATAAGG 20 7.8520266E-4 44.0 16 TACTTGT 25 4.4390632E-5 44.0 13 CTATCTA 30 2.5247118E-6 44.0 13 CGCGGAT 25 4.4390632E-5 44.0 19 CCGATAT 20 7.8520266E-4 44.0 15 GCGCGTA 20 7.8520266E-4 44.0 39 CTATAGG 30 2.5247118E-6 44.0 23 CTATAGC 25 4.4390632E-5 44.0 28 CGGCATA 25 4.4390632E-5 44.0 13 AACTTAA 25 4.4390632E-5 44.0 22 >>END_MODULE