##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527758_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 621563 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.209874139869974 33.0 31.0 34.0 31.0 34.0 2 32.631327797825804 34.0 31.0 34.0 31.0 34.0 3 32.74814137907179 34.0 31.0 34.0 31.0 34.0 4 36.212856942900395 37.0 37.0 37.0 35.0 37.0 5 36.12757033478505 37.0 37.0 37.0 35.0 37.0 6 35.94725072116584 37.0 37.0 37.0 35.0 37.0 7 36.498282555428815 37.0 37.0 37.0 35.0 37.0 8 36.63870436303319 37.0 37.0 37.0 35.0 37.0 9 38.70829505617291 39.0 39.0 39.0 39.0 39.0 10 38.057746358776186 39.0 38.0 39.0 37.0 39.0 11 37.664568193409195 39.0 38.0 39.0 35.0 39.0 12 36.802295181663 39.0 35.0 39.0 33.0 39.0 13 36.70662024605712 39.0 35.0 39.0 33.0 39.0 14 37.44776313905429 40.0 36.0 40.0 33.0 40.0 15 37.47953626583307 40.0 36.0 40.0 33.0 40.0 16 37.463636027241 40.0 35.0 40.0 33.0 40.0 17 37.35753093411287 40.0 35.0 40.0 33.0 40.0 18 37.3037873876019 40.0 35.0 40.0 33.0 40.0 19 37.24996339872225 39.0 35.0 40.0 33.0 40.0 20 37.116202219244066 39.0 35.0 40.0 32.0 40.0 21 36.98959880173047 39.0 35.0 40.0 32.0 40.0 22 36.93633951827892 39.0 35.0 40.0 32.0 40.0 23 36.84124859426961 39.0 35.0 40.0 32.0 40.0 24 36.708549254057914 38.0 35.0 40.0 32.0 40.0 25 36.64902833662879 38.0 35.0 40.0 32.0 40.0 26 36.468047486739074 38.0 35.0 40.0 32.0 40.0 27 36.31377350324907 38.0 35.0 40.0 32.0 40.0 28 36.06526450255244 37.0 35.0 40.0 31.0 40.0 29 35.89649158653266 37.0 35.0 40.0 31.0 40.0 30 35.73588035323853 37.0 34.0 40.0 31.0 40.0 31 35.51201889430355 36.0 34.0 40.0 30.0 40.0 32 35.37140241616699 36.0 34.0 40.0 30.0 40.0 33 35.13881135138353 35.0 34.0 39.0 30.0 40.0 34 34.78980730835008 35.0 33.0 39.0 28.0 40.0 35 34.60489121778484 35.0 33.0 39.0 28.0 40.0 36 34.64734548227613 35.0 33.0 39.0 29.0 40.0 37 34.60929302419867 35.0 34.0 39.0 29.0 40.0 38 34.52909520032563 35.0 34.0 39.0 29.0 40.0 39 34.40047750590045 35.0 33.0 38.0 29.0 40.0 40 34.13640129801806 35.0 33.0 38.0 28.0 40.0 41 34.006734635105374 35.0 33.0 38.0 27.0 40.0 42 33.92527386604415 35.0 33.0 37.0 27.0 40.0 43 33.816784461108526 35.0 33.0 37.0 27.0 40.0 44 33.6837778310485 35.0 33.0 37.0 27.0 40.0 45 33.60325341115864 35.0 33.0 37.0 27.0 40.0 46 33.37921176131784 35.0 33.0 36.0 26.0 40.0 47 33.258100948737294 35.0 33.0 36.0 26.0 40.0 48 33.05833037037275 35.0 32.0 36.0 25.0 39.0 49 33.42380257512111 35.0 33.0 36.0 27.0 39.0 50 33.5662193534686 35.0 33.0 36.0 27.0 39.0 51 33.614467077351776 35.0 33.0 36.0 28.0 39.0 52 33.177335201741414 35.0 33.0 35.0 27.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 1.0 15 10.0 16 27.0 17 71.0 18 143.0 19 314.0 20 527.0 21 816.0 22 1282.0 23 1933.0 24 2725.0 25 3678.0 26 5041.0 27 6646.0 28 8768.0 29 11096.0 30 14127.0 31 18389.0 32 24097.0 33 35067.0 34 70373.0 35 93043.0 36 107908.0 37 89547.0 38 97685.0 39 28245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.09309273557145 0.7088581527536227 0.1504272294200266 0.04762188225489612 8 99.65409781470261 0.24100533654673784 0.03861233696342929 0.06628451178722028 9 98.791594737782 0.6565706131156456 0.20464538590617526 0.3471892631961684 10 62.72622405130293 28.65662853162109 2.8158046730580812 5.801342744017903 11 41.40980077642975 22.69391839604352 19.236344505705777 16.659936321820958 12 34.88512025329693 14.279163978550846 25.012267461222752 25.823448306929464 13 27.126775564182555 15.287911281720437 27.904975038733 29.68033811536401 14 26.812728556879996 16.473470911235065 29.70575790386493 27.008042628020007 15 28.059102617112025 17.431539522140152 28.68365716749549 25.825700693252333 16 34.40938408496001 18.738567128352233 24.399457496665665 22.452591290022088 17 33.265976256630466 19.791557734292418 22.99380754645949 23.94865846261763 18 31.29256406832453 21.000606535459802 22.796884627946 24.909944768269668 19 31.58344367344903 21.51205911548789 22.068720306710663 24.835776904352414 20 31.488682563151283 22.89840289721235 21.95400948898181 23.65890505065456 21 31.490130525787407 21.797146870067877 23.786325762633876 22.926396841510837 22 31.813187078381432 18.674213233413187 25.626364503678627 23.88623518452675 23 32.29439332778817 20.236082263583903 23.55256023926778 23.916964169360146 24 31.266822510348913 19.33754100549743 22.83823200544434 26.55740447870932 25 29.54567759020405 20.491406341754576 21.544879601906803 28.418036466134566 26 26.412608215096455 21.11097346528027 23.465843365837415 29.010574953785863 27 27.091702691440773 19.19837570769174 22.844023855988855 30.865897744878634 28 28.54642248653797 22.378262541367487 21.344095449696972 27.73121952239757 29 30.897270268661426 21.911535918322038 21.000606535459802 26.190587277556745 30 29.48743731528421 18.982146620696536 23.733072914571814 27.79734314944744 31 32.7424573213013 20.162879708090735 20.469043363263257 26.62561960734471 32 34.798886034078606 19.726399415666634 22.40239525196963 23.07231929828513 33 34.18607606952151 18.56432895780476 25.07404720036424 22.175547772309486 34 28.530494897540553 20.930460789976237 28.645849254218803 21.893195058264407 35 27.240842842962014 26.35324174701519 26.910224707712654 19.495690702310146 36 29.96767825626686 26.238048275074288 22.689574508135138 21.104698960523713 37 30.12228848885793 26.704614013382393 20.160788206505213 23.012309291254464 38 31.02967840749852 26.693673851242757 20.759118544701018 21.51752919655771 39 31.37992448070429 22.912399869361593 21.17307497389645 24.534600676037666 40 28.63249582101895 23.610961398924967 20.13665549590307 27.619887284153016 41 26.52072275859406 24.509824426486134 21.08925402573834 27.880198789181463 42 24.641106372161794 22.503430867023937 21.87951985558986 30.975942905224414 43 25.351412487551546 20.524548597648188 24.394470069807888 29.729568844992382 44 28.087900985097246 19.415730987848377 23.30174093374284 29.19462709331154 45 28.781957742014892 22.33144508279933 22.574863690406282 26.3117334847795 46 27.423768789326264 22.603662058391507 22.16042460699881 27.812144545283424 47 26.266203104110126 22.62522061319609 24.158452160118927 26.950124122574863 48 28.515210847492533 20.82669013438702 25.203720298666425 25.454378719454024 49 28.17284812641679 21.00108918967184 24.173253555954908 26.652809127956456 50 26.354689709651314 21.118695932672953 24.499688688033235 28.026925669642498 51 26.305298095285597 20.170763060220768 24.779949900492788 28.743988944000847 52 26.41727387247954 20.644407726972165 26.2407833156092 26.697535084939094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 8.0 8 16.0 9 10.5 10 5.0 11 4.0 12 3.0 13 24.0 14 292.0 15 539.0 16 860.5 17 1182.0 18 867.0 19 552.0 20 667.5 21 783.0 22 834.5 23 886.0 24 833.5 25 781.0 26 845.5 27 910.0 28 1269.5 29 1629.0 30 2131.0 31 2633.0 32 3131.5 33 3630.0 34 3522.0 35 3414.0 36 4599.0 37 5784.0 38 6522.5 39 8084.5 40 8908.0 41 10045.0 42 11182.0 43 10872.0 44 10562.0 45 12625.0 46 14688.0 47 16934.5 48 19181.0 49 17916.0 50 16651.0 51 20367.0 52 24083.0 53 24771.0 54 25459.0 55 29637.5 56 33816.0 57 37058.5 58 40301.0 59 46702.0 60 53103.0 61 57646.0 62 62189.0 63 59497.5 64 59808.0 65 62810.0 66 55742.0 67 48674.0 68 41845.0 69 35016.0 70 29179.0 71 23342.0 72 19530.0 73 15718.0 74 12857.5 75 9997.0 76 10593.5 77 11190.0 78 8259.5 79 5329.0 80 3374.0 81 1419.0 82 1047.5 83 676.0 84 508.5 85 341.0 86 193.0 87 45.0 88 30.0 89 9.5 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 621563.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.055498798995437 #Duplication Level Percentage of deduplicated Percentage of total 1 66.65668064709406 5.369528108976886 2 9.88016776512882 1.5917935913173724 3 4.357898941481926 1.0531514906775339 4 2.170960655082884 0.6995268379874606 5 1.2762133013780708 0.5140267358256524 6 0.7729179149191132 0.3735743601211784 7 0.5012981825444377 0.2826744835197719 8 0.43539045336528864 0.28058298193425285 9 0.2915917715198722 0.21140254487477536 >10 6.09746355102856 14.07049647421098 >50 4.7313760734971035 27.309057971597404 >100 2.7102057120031957 38.93716324813414 >500 0.08388256440982625 4.452163336620745 >1k 0.03395246654683443 4.854857834201843 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4452 0.7162588506716133 No Hit ACGAGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3187 0.5127396579268715 No Hit ACGAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2937 0.4725184735899659 No Hit ACGAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2201 0.3541073069021161 No Hit ACGAGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2151 0.346063070034735 No Hit ACGAGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1690 0.27189520611748125 No Hit ACGAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1430 0.23006517440709953 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 1349 0.21703351068194213 No Hit ACGAGCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1340 0.21558554804581354 No Hit ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 1320 0.2123678532988611 No Hit ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1270 0.20432361643148 No Hit ACGAGCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1231 0.19804911167492276 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTTAGCGGTTAAGAGCACTGACTGCTCT 1224 0.1969229185134894 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 1152 0.18533921742446058 No Hit ACGAGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1116 0.17954736687994619 No Hit ACGAGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1077 0.17327286212338894 No Hit ACGAGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1049 0.1687680894776555 No Hit ACGAGCGGGGGGCTGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTG 989 0.1591150052367982 No Hit ACGAGCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 971 0.15621907996454099 No Hit ACGAGCGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTT 951 0.15300138521758855 No Hit ACGAGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 862 0.1386826435936502 No Hit ACGAGCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 832 0.13385610147322155 No Hit ACGAGCGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 787 0.12661628829257857 No Hit ACGAGCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 785 0.1262945188178833 No Hit ACGAGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 767 0.1233985935456261 No Hit ACGAGCGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 766 0.12323770880827847 No Hit ACGAGCGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTGGT 750 0.12066355301071653 No Hit ACGAGCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 746 0.12002001406132604 No Hit ACGAGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGC 721 0.11599789562763549 No Hit ACGAGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 708 0.11390639404211642 No Hit ACGAGCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 698 0.11229754666864018 No Hit ACGAGCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 698 0.11229754666864018 No Hit ACGAGCGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAACAC 678 0.10907985192168775 No Hit ACGAGCGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACCGACTGCTCT 675 0.10859719770964488 No Hit ACGAGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 653 0.10505773348799718 No Hit ACGAGCGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAG 648 0.10425330980125909 No Hit ACGAGCGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 625 0.10055296084226378 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.003861233696342929 0.0 0.0 0.0 0.0 8 0.004987426857776284 0.0 0.0 0.0 0.0 9 0.006918043705947748 0.0 0.0 0.0 0.0 10 0.012066355301071653 0.0 0.0 0.0 0.0 11 0.020271476905800376 0.0 0.0 0.0 0.0 12 0.02590244271296715 0.0 0.0 0.0 0.0 13 0.03346402536830539 0.0 0.0 0.0 0.0 14 0.03861233696342929 0.0 0.0 0.0 0.0 15 0.0489089601536771 0.0 0.0 0.0 0.0 16 0.05630965807166771 0.0 0.0 0.0 0.0 17 0.0649974338884393 0.0 0.0 0.0 0.0 18 0.07416786391725376 0.0 0.0 0.0 0.0 19 0.08430360237015395 0.0 0.0 0.0 0.0 20 0.0926696087122303 0.0 0.0 0.0 0.0 21 0.10055296084226378 0.0 0.0 0.0 0.0 22 0.10891896718434012 0.0 0.0 0.0 0.0 23 0.11921559037458794 0.0 0.0 0.0 0.0 24 0.12822513566605476 0.0 0.0 0.0 0.0 25 0.13626937253343588 0.0 0.0 0.0 0.0 26 0.14560068729959794 0.0 0.0 0.0 0.0 27 0.15316226995493618 0.0 0.0 0.0 0.0 28 0.16024119839823156 0.0 0.0 0.0 0.0 29 0.16957251316439365 0.0 0.0 0.0 0.0 30 0.17938648214259859 0.0 0.0 0.0 0.0 31 0.18646541058589394 0.0 0.0 0.0 0.0 32 0.19450964745327504 0.0 0.0 0.0 0.0 33 0.20287565379535138 0.0 0.0 0.0 0.0 34 0.20963281276395151 0.0 0.0 0.0 0.0 35 0.22314713070115177 0.0 0.0 0.0 0.0 36 0.23891383496121874 0.0 0.0 0.0 0.0 37 0.25065842078759515 0.0 0.0 0.0 0.0 38 0.26015062029110486 0.0 0.0 0.0 0.0 39 0.2723778603295241 0.0 0.0 0.0 0.0 40 0.2810656361462957 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCACGTA 35 1.0185613E-7 46.000004 28 TCGACGC 35 1.0185613E-7 46.000004 35 TCAACGA 35 1.0185613E-7 46.000004 13 GCATAAC 20 6.309206E-4 46.0 31 TCACGAC 25 3.415332E-5 46.0 24 CTTAACG 55 1.8189894E-12 46.0 17 CGTGGAA 20 6.309206E-4 46.0 21 ACTATCG 20 6.309206E-4 46.0 45 GGTACTC 20 6.309206E-4 46.0 8 ACTATAG 20 6.309206E-4 46.0 35 GATACGA 25 3.415332E-5 46.0 34 TCTGACG 20 6.309206E-4 46.0 43 GTCGCAA 30 1.8600131E-6 46.0 10 TCGCAAA 30 1.8600131E-6 46.0 11 CGAACGT 30 1.8600131E-6 46.0 38 ACAAAAC 20 6.309206E-4 46.0 34 CGTATTG 25 3.415332E-5 46.0 13 AATTTCG 20 6.309206E-4 46.0 31 ATTAGGT 20 6.309206E-4 46.0 27 CGTATAT 20 6.309206E-4 46.0 28 >>END_MODULE