##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527756_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 513971 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.990641495337286 33.0 31.0 33.0 31.0 34.0 2 32.75595510252524 34.0 31.0 34.0 31.0 34.0 3 30.76448476665026 31.0 30.0 33.0 28.0 33.0 4 35.54462605866868 35.0 35.0 37.0 35.0 37.0 5 36.16414933916505 37.0 35.0 37.0 35.0 37.0 6 36.51027198032574 37.0 37.0 37.0 35.0 37.0 7 36.41005620939703 37.0 36.0 37.0 35.0 37.0 8 36.657091547966715 37.0 37.0 37.0 35.0 37.0 9 38.753945261503084 39.0 39.0 39.0 39.0 39.0 10 38.26893346122641 39.0 39.0 39.0 37.0 39.0 11 38.070858083432725 39.0 38.0 39.0 37.0 39.0 12 37.688671150706945 39.0 37.0 39.0 35.0 39.0 13 37.577571497224554 39.0 37.0 39.0 35.0 39.0 14 38.43248354479144 40.0 38.0 40.0 35.0 40.0 15 38.42544034585609 40.0 38.0 40.0 35.0 40.0 16 38.4266797153925 40.0 38.0 40.0 35.0 40.0 17 38.40941609546064 40.0 38.0 40.0 35.0 40.0 18 38.30148199022902 40.0 38.0 40.0 35.0 40.0 19 38.26453048907429 40.0 38.0 40.0 34.0 40.0 20 38.1977465654677 40.0 38.0 40.0 34.0 40.0 21 38.11473020851371 40.0 38.0 40.0 34.0 40.0 22 38.21900457418804 40.0 38.0 40.0 34.0 40.0 23 38.14790328637219 40.0 38.0 40.0 34.0 40.0 24 38.02655791863743 40.0 38.0 40.0 34.0 40.0 25 37.98581632037605 40.0 38.0 40.0 34.0 40.0 26 37.83156831805685 40.0 37.0 40.0 34.0 40.0 27 37.68207350220148 40.0 37.0 40.0 34.0 40.0 28 37.51678791215847 40.0 37.0 40.0 33.0 40.0 29 37.6058804874205 40.0 37.0 40.0 33.0 40.0 30 37.726260820163006 40.0 37.0 40.0 34.0 40.0 31 37.75209885382638 40.0 37.0 40.0 34.0 40.0 32 37.67120129345819 40.0 37.0 40.0 34.0 40.0 33 37.592296063396574 40.0 37.0 40.0 34.0 40.0 34 37.15169922038403 40.0 36.0 40.0 33.0 40.0 35 37.12379297664654 40.0 36.0 40.0 33.0 40.0 36 37.03041416733629 40.0 35.0 40.0 33.0 40.0 37 36.86411101015427 40.0 35.0 40.0 32.0 40.0 38 36.71680503374704 40.0 35.0 40.0 32.0 40.0 39 36.52701027879005 40.0 35.0 40.0 31.0 40.0 40 36.25811183899481 39.0 35.0 40.0 31.0 40.0 41 36.12119166256462 39.0 35.0 40.0 30.0 40.0 42 36.025758262625715 39.0 35.0 40.0 30.0 40.0 43 35.83313455428419 39.0 35.0 40.0 30.0 40.0 44 35.51941841076636 39.0 35.0 40.0 28.0 40.0 45 35.426175795910666 38.0 35.0 40.0 28.0 40.0 46 35.240215887666814 38.0 35.0 40.0 27.0 40.0 47 35.15219730296067 38.0 35.0 40.0 27.0 40.0 48 35.03768695120931 37.0 35.0 40.0 27.0 40.0 49 34.863070095394484 37.0 34.0 40.0 27.0 40.0 50 34.148123143134534 36.0 33.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 5.0 16 18.0 17 34.0 18 79.0 19 132.0 20 281.0 21 446.0 22 678.0 23 1060.0 24 1571.0 25 2371.0 26 3185.0 27 4258.0 28 5601.0 29 6960.0 30 8109.0 31 9217.0 32 11561.0 33 15620.0 34 27413.0 35 30365.0 36 48120.0 37 80534.0 38 183541.0 39 72812.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.52896175076026 0.259547717672787 0.15409429714906092 0.057396234417895174 8 99.20520807594202 0.6171554426222492 0.1317194939014069 0.04591698753431614 9 97.84715480056268 1.1798331034241232 0.4340711830044886 0.5389409130087106 10 53.45496146669754 31.987991540378736 6.050925052191661 8.506121940732065 11 32.968591613145485 26.532430818081178 21.283301976181534 19.2156755925918 12 27.86441258358935 19.912602072879597 26.31257405573466 25.910411287796393 13 24.756066003723944 19.200305075578193 28.46600294569149 27.57762597500637 14 25.001216021915635 20.980950287078453 28.477871319588072 25.53996237141784 15 24.285806008510207 20.827050553435893 28.382729764908916 26.504413673144985 16 29.113315731821444 22.08568187699306 24.325886090849483 24.475116300336012 17 29.255930782086924 22.73960982234406 21.764846654772352 26.23961274079666 18 28.522426362576876 22.636880290911353 22.46352420661866 26.37716913989311 19 28.78820011245771 22.08840576608408 22.841950226763768 26.281443894694444 20 27.849236630082242 23.45579808977549 22.133155372579385 26.56180990756288 21 30.557171513567887 21.242832766829256 24.981370544252496 23.21862517535036 22 29.14755890896568 21.152749863319137 22.628319496625295 27.07137173108989 23 28.111313673339545 23.942790546548345 22.572479770259413 25.373416009852694 24 27.126627766936267 23.28010724340478 23.7328565230334 25.86040846662555 25 26.8845907648486 23.076982942617384 23.15636485326993 26.88206143926408 26 27.755457019948597 23.155002908724423 21.321047296442796 27.768492774884184 27 27.256012498759656 22.874636895855993 22.454963412332603 27.41438719305175 28 27.81946841358754 23.896873559014033 21.546546400477848 26.737111626920584 29 29.12985362987406 23.584599131079383 22.642717196106396 24.64283004294017 30 29.059421640520572 23.482064163153176 22.18899509894527 25.269519097380982 31 29.76841105821146 23.116479334437155 20.55057581069749 26.564533796653894 32 31.146504374760443 23.43964931873588 21.82827435789179 23.585571948611886 33 31.55372579386775 22.19619394868582 21.964468812442725 24.285611445003706 34 26.93284251446093 25.723630321555106 24.061668849020666 23.281858314963298 35 28.116372324508582 26.03960145611328 23.93753733187281 21.906488887505326 36 29.358465750013135 25.146360397765633 21.037373703963844 24.45780014825739 37 29.400102340404423 25.31446326738279 21.72418288191357 23.56125151029922 38 29.36527547274068 24.785055966192644 21.997350045041454 23.85231851602522 39 28.39907309945503 23.539654961077574 22.410602932850296 25.650669006617104 40 28.50413739296575 22.850900148062827 22.78299748429386 25.86196497467756 41 26.88731465393962 23.10071969041055 23.629154174068187 26.382811481581648 42 26.94860215848754 23.24605862976705 23.23594132742898 26.56939788431643 43 27.18110554875664 21.628263073208412 24.674738458006384 26.515892920028563 44 26.82271956978117 22.126151086345338 25.315241521408794 25.735887822464694 45 26.81318595796261 21.631570652818933 24.884283354508327 26.670960034710127 46 26.467252043403228 23.33789260483568 23.593938179391444 26.60091717236965 47 27.27858186551381 24.836809858922003 22.708285097797347 25.17632317776684 48 29.49991341923961 23.010442223393927 23.117257588463165 24.372386768903304 49 27.553500100200207 23.02970401053756 24.195333977987087 25.22146191127515 50 25.347149936475017 24.901794070093448 23.89804094005304 25.8530150533785 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 12.5 6 14.0 7 27.5 8 41.0 9 551.0 10 1061.0 11 1582.0 12 2103.0 13 2217.5 14 2332.0 15 2075.5 16 1819.0 17 1733.0 18 1647.0 19 1758.0 20 1869.0 21 2402.5 22 2936.0 23 3416.0 24 3896.0 25 4029.5 26 4163.0 27 4440.0 28 4717.0 29 5430.5 30 6144.0 31 5647.5 32 5151.0 33 5801.5 34 6452.0 35 6494.0 36 6536.0 37 8196.5 38 9857.0 39 10482.5 40 11108.0 41 11689.5 42 12271.0 43 13311.5 44 14352.0 45 16396.5 46 18441.0 47 20270.0 48 22099.0 49 23438.0 50 24777.0 51 26966.0 52 29155.0 53 31848.0 54 34541.0 55 39241.5 56 43942.0 57 43833.5 58 43725.0 59 42995.5 60 42266.0 61 43120.5 62 43975.0 63 39699.0 64 35423.0 65 29413.5 66 23404.0 67 20202.0 68 17000.0 69 14801.0 70 12602.0 71 10206.5 72 7811.0 73 8871.0 74 9931.0 75 6975.5 76 4020.0 77 2634.0 78 1248.0 79 1078.5 80 909.0 81 512.0 82 115.0 83 88.5 84 62.0 85 40.0 86 18.0 87 18.0 88 18.0 89 13.5 90 9.0 91 4.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 513971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.469631555087739 #Duplication Level Percentage of deduplicated Percentage of total 1 73.15181279791997 9.85327965974734 2 8.406760075111945 2.2647192156755924 3 3.2384804275603063 1.3086341447280099 4 1.5109056767297413 0.8140537112016047 5 0.803120034667052 0.5408865480737239 6 0.5387837642640474 0.43543312754999797 7 0.41167124079156436 0.38815419547017244 8 0.3668929654773942 0.395353045210722 9 0.27733641484905386 0.3362057392343148 >10 7.438971544128268 28.54421747530503 >50 2.7762530694785497 25.399098392710872 >100 1.03423371370793 23.247226010806056 >500 0.02888920988010978 2.523877806335377 >1k 0.01588906543406038 3.948860927951188 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTATTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 3572 0.694980845222785 No Hit CGTATTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2838 0.5521712314508017 No Hit CGTATTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2680 0.5214301974235901 No Hit CGTATTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1796 0.34943605767640584 No Hit CGTATTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1655 0.32200260325971697 No Hit CGTATTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1609 0.3130526819606554 No Hit CGTATTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1371 0.2667465674133365 No Hit CGTATTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCGTATTGGGA 1295 0.25195974091923473 No Hit CGTATTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1261 0.2453445816981892 No Hit CGTATTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1132 0.2202458893595164 No Hit CGTATTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1087 0.2114905315669561 No Hit CGTATTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 899 0.17491259234470427 No Hit CGTATTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 827 0.16090401987660782 No Hit CGTATTGGGGGGCTGGCGAGATGGCTCAGTAGGTAAGAGCACCCGACGGC 820 0.15954207533109846 No Hit CGTATTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 792 0.15409429714906092 No Hit CGTATTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 732 0.14242048675898056 No Hit CGTATTGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 729 0.14183679623947654 No Hit CGTATTGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 667 0.1297738588363935 No Hit CGTATTGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 647 0.1258825887063667 No Hit CGTATTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 643 0.12510433468036133 No Hit CGTATTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 634 0.12335326312184929 No Hit CGTATTGGGGGCCCTTCAGCCTAGAGCGCGGAGGAGGACGGTAGCTCGGT 613 0.11926742948532117 No Hit CGTATTGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 596 0.11595984987479839 No Hit CGTATTGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 595 0.11576528636829705 No Hit CGTATTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 593 0.11537615935529437 No Hit CGTATTGGGATATGTGGTTGCTGTGGGCTCCCCCTGGCCCCTGTGTCATA 560 0.10895556364075017 No Hit CGTATTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 557 0.10837187312124615 No Hit CGTATTGGGAGATCTTGGTGGTAGTAGCAAATATTCAAACGAGAACTTTG 545 0.10603711104323008 No Hit CGTATTGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 517 0.10058933286119255 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.006031468701541527 0.0 0.0 0.0 0.0 8 0.03755075675475854 0.0 0.0 0.0 0.0 9 0.04416591597580408 0.0 0.0 0.0 0.0 10 0.10798274610824346 0.0 0.0 0.0 0.0 11 0.17588540987721096 0.0 0.0 0.0 0.0 12 0.21577092870998557 0.0 0.0 0.0 0.0 13 0.24456632767218384 0.0 0.0 0.0 0.0 14 0.26810851195884594 0.0 0.0 0.0 0.0 15 0.29418002183002545 0.0 0.0 0.0 0.0 16 0.3315362150782826 0.0 0.0 0.0 0.0 17 0.36655764624852377 0.0 0.0 0.0 0.0 18 0.39399110066521265 0.0 0.0 0.0 0.0 19 0.42745602378344305 0.0 0.0 0.0 0.0 20 0.4646176535251989 0.0 0.0 0.0 0.0 21 0.5021684102799574 0.0 0.0 0.0 0.0 22 0.5492527788532816 0.0 0.0 0.0 0.0 23 0.5994501635306272 0.0 0.0 0.0 0.0 24 0.6467290956104528 0.0 0.0 0.0 0.0 25 0.6949808452227849 0.0 0.0 0.0 0.0 26 0.7475129919781466 0.0 0.0 0.0 0.0 27 0.7920680349669534 0.0 0.0 0.0 0.0 28 0.8475186343198352 0.0 0.0 0.0 0.0 29 0.8803998669185615 0.0 0.0 0.0 0.0 30 0.9154212980888027 0.0 0.0 0.0 0.0 31 0.9434384430249956 0.0 0.0 0.0 0.0 32 0.978654437701738 0.0 0.0 0.0 0.0 33 1.0068661461444324 0.0 0.0 0.0 0.0 34 1.03702348965214 0.0 0.0 0.0 0.0 35 1.0741851193938958 0.0 0.0 0.0 0.0 36 1.1039533358886007 0.0 0.0 0.0 0.0 37 1.136250877967823 0.0 0.0 0.0 0.0 38 1.1632952053715093 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 30 2.5249738E-6 44.000004 27 CACGGTA 30 2.5249738E-6 44.000004 27 CTCAAAC 30 2.5249738E-6 44.000004 22 CGCGCAT 30 2.5249738E-6 44.000004 39 ATATGCT 175 0.0 44.000004 34 AGTATAC 65 0.0 44.000004 17 TTATAGC 30 2.5249738E-6 44.000004 13 GTTACGC 30 2.5249738E-6 44.000004 16 TACGCGA 30 2.5249738E-6 44.000004 18 ACCTAAT 30 2.5249738E-6 44.000004 11 AATTAGT 30 2.5249738E-6 44.000004 30 GTATACC 65 0.0 44.000004 18 TTACGCG 30 2.5249738E-6 44.000004 17 TATACCC 65 0.0 44.000004 19 TAGCTTA 30 2.5249738E-6 44.000004 16 TCGAAGT 30 2.5249738E-6 44.000004 39 AGCGTAC 20 7.8524166E-4 44.0 11 ATTAGTT 25 4.4393946E-5 44.0 10 TCCGCGA 20 7.8524166E-4 44.0 41 CATATCC 20 7.8524166E-4 44.0 29 >>END_MODULE