##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527754_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 767255 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.782374829750214 31.0 31.0 33.0 31.0 34.0 2 32.45032094935843 33.0 31.0 34.0 31.0 34.0 3 30.48939531185851 31.0 30.0 31.0 28.0 33.0 4 35.37156877439704 35.0 35.0 37.0 35.0 37.0 5 35.94320923291474 37.0 35.0 37.0 35.0 37.0 6 36.310353142045344 37.0 36.0 37.0 35.0 37.0 7 36.14419456373696 37.0 35.0 37.0 35.0 37.0 8 36.52302298453578 37.0 37.0 37.0 35.0 37.0 9 38.647341496634105 39.0 39.0 39.0 38.0 39.0 10 37.99211214003167 39.0 38.0 39.0 37.0 39.0 11 37.760002867364825 39.0 38.0 39.0 35.0 39.0 12 37.385148353546086 39.0 37.0 39.0 35.0 39.0 13 37.15845058031554 39.0 37.0 39.0 34.0 39.0 14 38.14614046177607 40.0 38.0 40.0 34.0 40.0 15 38.17775446233651 40.0 38.0 40.0 34.0 40.0 16 38.200706414425454 40.0 38.0 40.0 34.0 40.0 17 38.22367922007677 40.0 38.0 40.0 35.0 40.0 18 38.190284846628565 40.0 38.0 40.0 34.0 40.0 19 38.11569817075158 40.0 38.0 40.0 34.0 40.0 20 38.13119106424852 40.0 38.0 40.0 34.0 40.0 21 38.09777714058559 40.0 38.0 40.0 34.0 40.0 22 38.01169363510176 40.0 38.0 40.0 34.0 40.0 23 37.99480355292569 40.0 38.0 40.0 34.0 40.0 24 37.9182579455331 40.0 38.0 40.0 34.0 40.0 25 37.85784647868049 40.0 37.0 40.0 34.0 40.0 26 37.63842659871881 40.0 37.0 40.0 33.0 40.0 27 37.50700223524122 40.0 37.0 40.0 33.0 40.0 28 37.41392496627588 40.0 36.0 40.0 33.0 40.0 29 37.30563763025331 40.0 36.0 40.0 33.0 40.0 30 37.14955653596262 39.0 36.0 40.0 33.0 40.0 31 37.10324859401373 39.0 36.0 40.0 32.0 40.0 32 36.92474601012701 39.0 35.0 40.0 32.0 40.0 33 36.65937269877681 39.0 35.0 40.0 31.0 40.0 34 36.514121120096966 39.0 35.0 40.0 31.0 40.0 35 36.43802256094779 39.0 35.0 40.0 31.0 40.0 36 36.20522251402728 39.0 35.0 40.0 30.0 40.0 37 36.09747476393116 38.0 35.0 40.0 30.0 40.0 38 35.67696267864009 38.0 35.0 40.0 29.0 40.0 39 35.650004235879855 38.0 35.0 40.0 29.0 40.0 40 35.461506278877295 38.0 35.0 40.0 28.0 40.0 41 35.10899375044803 38.0 34.0 40.0 27.0 40.0 42 35.14924894591759 38.0 34.0 40.0 27.0 40.0 43 35.05930362135144 38.0 34.0 40.0 27.0 40.0 44 34.88067070269989 37.0 34.0 40.0 27.0 40.0 45 34.70816091130067 37.0 34.0 40.0 26.0 40.0 46 34.36799369179738 37.0 33.0 40.0 24.0 40.0 47 34.10248483229174 36.0 33.0 40.0 23.0 40.0 48 34.05473278114838 36.0 33.0 40.0 23.0 40.0 49 33.918806654893096 36.0 33.0 39.0 24.0 40.0 50 33.61985128803332 35.0 33.0 39.0 23.0 40.0 51 33.94830401887248 36.0 33.0 39.0 24.0 40.0 52 33.66114785827398 35.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 3.0 16 10.0 17 52.0 18 145.0 19 275.0 20 465.0 21 830.0 22 1297.0 23 2184.0 24 3266.0 25 4472.0 26 6274.0 27 8451.0 28 10659.0 29 12652.0 30 14464.0 31 17539.0 32 22569.0 33 31603.0 34 49667.0 35 57089.0 36 93353.0 37 136489.0 38 239531.0 39 53913.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.6212471733648 0.2540224566799825 0.08328391473499684 0.041446455220233165 8 99.26777929110922 0.5889828023277789 0.09475337404122489 0.0484845325217822 9 97.75146463691993 1.209767287277372 0.43479677551791773 0.6039713002847814 10 53.42799981753132 32.16257958566578 5.928146444141778 8.48127415266111 11 33.055372724843764 26.478289486546192 21.154114342689198 19.312223445920846 12 27.987305393904244 19.708962470104463 26.426546584903328 25.877185551087965 13 25.09530729679181 18.90088692807476 28.52545763794306 27.478348137190373 14 25.01971313318258 20.673309395181523 28.65657441137562 25.65040306026028 15 24.482342897732824 20.621566493538655 28.439436693146348 26.456653915582173 16 29.1332086464083 21.724850277938888 24.41495982430874 24.72698125134408 17 29.482636150953724 22.482616600738996 21.734495050537305 26.300252197769975 18 28.57654886576171 22.41823122690631 22.495910746753033 26.509309160578947 19 28.840737434099484 21.697349642556908 23.071599403066777 26.39031352027683 20 27.91822796853719 23.14211051084711 22.418491896435995 26.52116962417971 21 30.673765566858474 20.937106959224767 25.028575897191935 23.360551576724816 22 29.33392418426729 20.870245224860053 22.645795726323062 27.150034864549593 23 28.04882340291038 23.667750617460946 22.77691249975562 25.506513479873057 24 27.104939035913745 23.027155248255145 23.84878560582857 26.019120110002543 25 27.039510983962305 22.735335709770546 23.157881017393176 27.067272288873973 26 27.959935093287108 22.673557031234726 21.447106894057384 27.91940098142078 27 27.139477748597272 22.61634006946843 22.605261614456733 27.638920567477566 28 27.873523144195865 23.542629243211188 21.65095046627262 26.93289714632032 29 29.251031273826822 23.236081876299274 22.78316856846811 24.72971828140579 30 29.142071410417657 23.239470580185206 22.258962144267553 25.359495865129585 31 29.96148607698875 22.8796162944523 20.56708656183407 26.591811066724887 32 31.238506102925363 23.06390965194101 21.949286742999394 23.748297502134232 33 31.68333865533623 21.983564786153234 21.960756202305625 24.372340356204912 34 26.913607601123484 25.414106131599013 24.088992577435143 23.58329368984236 35 28.256316348541226 25.874578855791096 23.895054447348013 21.97405034831966 36 29.81081908882966 24.816130230497034 21.051931887051893 24.321118793621416 37 29.491629249727925 25.28116467145864 21.709210106157666 23.51799597265577 38 29.423203498185092 24.545294589152235 21.983173781858703 24.04832813080397 39 28.503431062684502 23.369023336439646 22.43178604245003 25.695759558425816 40 28.60261581873041 22.71904386416511 22.86358511837655 25.814755198727934 41 27.06635994552007 23.04123140285824 23.575212934422062 26.317195717199628 42 26.818984561847103 23.173781858704082 23.376582752800566 26.630650826648246 43 27.322207088907856 21.264638223276485 24.77103440186118 26.642120285954473 44 26.93094212484767 21.897283171826835 25.38269545327173 25.789079250053764 45 26.87802621032121 21.45245061941597 24.96549387100768 26.70402929925514 46 26.507875478165673 23.055046887931653 23.6897771927195 26.74730044118318 47 27.622498387107285 24.62701448670911 22.680595108536274 25.069892017647327 48 29.48850121537168 22.715655160279177 23.26227916403282 24.533564460316324 49 27.64947768342989 22.860717753549995 24.31629640732221 25.17350815569791 50 25.530364741839414 24.675890023525426 23.90873959765658 25.88500563697858 51 26.12729796482265 24.111410156988224 23.68417279783123 26.077119080357896 52 27.25156564636268 23.347387765475624 23.566089500883017 25.834957087278674 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 10.0 4 20.0 5 15.0 6 10.0 7 30.0 8 50.0 9 696.0 10 1342.0 11 2027.5 12 2713.0 13 2937.5 14 2920.5 15 2679.0 16 2377.5 17 2076.0 18 2078.0 19 2080.0 20 2791.5 21 3503.0 22 3884.5 23 4266.0 24 4344.5 25 4423.0 26 5427.0 27 6431.0 28 6927.0 29 7423.0 30 7324.5 31 7226.0 32 8340.0 33 9454.0 34 9853.5 35 10253.0 36 10740.5 37 11228.0 38 12705.5 39 14867.0 40 15551.0 41 16996.0 42 18441.0 43 20349.0 44 22257.0 45 24301.0 46 26345.0 47 29234.0 48 32123.0 49 32741.5 50 33360.0 51 37897.0 52 42434.0 53 45825.0 54 49216.0 55 53346.0 56 57476.0 57 64788.0 58 72100.0 59 66437.0 60 60774.0 61 59429.5 62 58085.0 63 56962.5 64 48785.5 65 41731.0 66 33811.5 67 25892.0 68 23218.5 69 20545.0 70 17539.5 71 14534.0 72 15224.0 73 15914.0 74 11469.5 75 7025.0 76 5067.0 77 3109.0 78 2205.5 79 1302.0 80 906.5 81 511.0 82 313.5 83 116.0 84 65.0 85 14.0 86 12.5 87 11.0 88 11.5 89 13.5 90 15.0 91 7.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 767255.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.0278796488386 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0001255624385 12.501766251090638 2 8.497891594690778 2.7240636749716183 3 3.0439490726978082 1.46364148183183 4 1.4932770383903347 0.957362586147777 5 0.8322412270951811 0.6669531113341659 6 0.5081151735408244 0.4886405309556644 7 0.35352781309200526 0.3966410868529038 8 0.24754217373543927 0.3174060934914813 9 0.181205914419532 0.26139119291766055 >10 3.3595818435168456 15.35137894673923 >50 2.3063249509354735 26.165245800348767 >100 1.124444644616032 30.26490242893138 >500 0.03882974312343133 4.136349845505627 >1k 0.012943247707810444 4.304256968881271 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTATTGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 4819 0.628083231780829 No Hit CGTATTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4019 0.5238154199060286 No Hit CGTATTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3817 0.4974877974076415 No Hit CGTATTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2616 0.34095574483059743 No Hit CGTATTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2131 0.27774338388149966 No Hit CGTATTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1966 0.25623814768232206 No Hit CGTATTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCGTATTGGGAAG 1789 0.23316889430502244 No Hit CGTATTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1666 0.21713771822927191 No Hit CGTATTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1617 0.21075131475194034 No Hit CGTATTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 1547 0.20162788121289532 No Hit CGTATTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1507 0.19641449061915528 No Hit CGTATTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 1167 0.15210067057236512 No Hit CGTATTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1163 0.1515793315129911 No Hit CGTATTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1151 0.15001531433486912 No Hit CGTATTGGGGGGCTGGCGAGATGGCTCAGTAGGTAAGAGCACCCGACGGCTC 1121 0.14610527138956408 No Hit CGTATTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1101 0.14349857609269406 No Hit CGTATTGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 960 0.1251213742497605 No Hit CGTATTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 947 0.12342702230679499 No Hit CGTATTGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 915 0.11925630983180299 No Hit CGTATTGGGGGCCCTTCAGCCTAGAGCGCGGAGGAGGACGGTAGCTCGGTCA 885 0.11534626688649798 No Hit CGTATTGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 885 0.11534626688649798 No Hit CGTATTGGGAGATCTTGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAA 862 0.11234856729509744 No Hit CGTATTGGGATATGTGGTTGCTGTGGGCTCCCCCTGGCCCCTGTGTCATAAC 862 0.11234856729509744 No Hit CGTATTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 858 0.11182722823572346 No Hit CGTATTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 845 0.11013287629275796 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.003649373415618015 0.0 0.0 0.0 0.0 8 0.030759004503066126 0.0 0.0 0.0 0.0 9 0.035060051742901645 0.0 0.0 0.0 0.0 10 0.10218245563730442 0.0 0.0 0.0 0.0 11 0.15770506546063565 0.0 0.0 0.0 0.0 12 0.19472013867618979 0.0 0.0 0.0 0.0 13 0.2181803963480199 0.0 0.0 0.0 0.0 14 0.24229232784406748 0.0 0.0 0.0 0.0 15 0.2657525855158976 0.0 0.0 0.0 0.0 16 0.2967722595486507 0.0 0.0 0.0 0.0 17 0.3228392125173508 0.0 0.0 0.0 0.0 18 0.3472118135430854 0.0 0.0 0.0 0.0 19 0.38070784810786507 0.0 0.0 0.0 0.0 20 0.4147252217320187 0.0 0.0 0.0 0.0 21 0.45017627776945085 0.0 0.0 0.0 0.0 22 0.49110139393031 0.0 0.0 0.0 0.0 23 0.5395859264520922 0.0 0.0 0.0 0.0 24 0.5854637636770044 0.0 0.0 0.0 0.0 25 0.6196114720660015 0.0 0.0 0.0 0.0 26 0.6585815667542082 0.0 0.0 0.0 0.0 27 0.6950753009103884 0.0 0.0 0.0 0.0 28 0.7436901681970141 0.0 0.0 0.0 0.0 29 0.7711908035789926 0.0 0.0 0.0 0.0 30 0.8011677994929978 0.0 0.0 0.0 0.0 31 0.8252797309890454 0.0 0.0 0.0 0.0 32 0.8529107011358674 0.0 0.0 0.0 0.0 33 0.8787169845748806 0.0 0.0 0.0 0.0 34 0.9043929332490502 0.0 0.0 0.0 0.0 35 0.9361946158708643 0.0 0.0 0.0 0.0 36 0.9668232856090869 0.0 0.0 0.0 0.0 37 0.9922385647535695 0.0 0.0 0.0 0.0 38 1.012440453304312 0.0 0.0 0.0 0.0 39 1.0336850199738028 0.0 0.0 0.0 0.0 40 1.0531048999354844 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAA 35 1.0189797E-7 46.000004 13 CTCAAAC 70 0.0 46.000004 22 GCGCCTA 35 1.0189797E-7 46.000004 9 CACGAAT 35 1.0189797E-7 46.000004 14 GCCGATA 35 1.0189797E-7 46.000004 44 CATCCGA 35 1.0189797E-7 46.000004 32 CGGCGTA 20 6.3101365E-4 46.0 40 CAAACCG 20 6.3101365E-4 46.0 24 CGAACGA 20 6.3101365E-4 46.0 34 CGAACCT 30 1.8605879E-6 46.0 31 CGAACAC 25 3.416086E-5 46.0 26 TTAATCG 25 3.416086E-5 46.0 20 CTACTAC 20 6.3101365E-4 46.0 38 CCCTATA 20 6.3101365E-4 46.0 21 TCCGATA 30 1.8605879E-6 46.0 25 CCGATAG 30 1.8605879E-6 46.0 26 TAGACGG 60 0.0 46.0 23 GGACTAA 20 6.3101365E-4 46.0 8 ATTACGA 20 6.3101365E-4 46.0 32 TAAACGC 20 6.3101365E-4 46.0 46 >>END_MODULE