##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527749_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1255636 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.286630838873684 33.0 31.0 34.0 31.0 34.0 2 32.61593726207277 34.0 31.0 34.0 31.0 34.0 3 32.79754482987108 34.0 31.0 34.0 31.0 34.0 4 36.437361623910114 37.0 37.0 37.0 35.0 37.0 5 36.31689518299889 37.0 37.0 37.0 35.0 37.0 6 36.15882787686878 37.0 37.0 37.0 35.0 37.0 7 36.55266972275405 37.0 37.0 37.0 35.0 37.0 8 36.60248750434043 37.0 37.0 37.0 35.0 37.0 9 38.640776467065294 39.0 39.0 39.0 38.0 39.0 10 37.97001360266829 39.0 38.0 39.0 35.0 39.0 11 36.67347384114505 39.0 35.0 39.0 33.0 39.0 12 36.264653131958624 39.0 35.0 39.0 32.0 39.0 13 36.24270091013638 39.0 35.0 39.0 32.0 39.0 14 36.913542619039276 40.0 35.0 40.0 33.0 40.0 15 37.078392941903545 40.0 35.0 40.0 33.0 40.0 16 37.194225077968454 40.0 35.0 40.0 33.0 40.0 17 37.1988346941311 40.0 35.0 40.0 33.0 40.0 18 37.185106989605266 40.0 35.0 40.0 33.0 40.0 19 37.16135727233052 40.0 35.0 40.0 33.0 40.0 20 37.10889143031898 40.0 35.0 40.0 33.0 40.0 21 37.02503751087099 39.0 35.0 40.0 33.0 40.0 22 37.07511651465871 39.0 35.0 40.0 33.0 40.0 23 37.072607029425726 39.0 35.0 40.0 33.0 40.0 24 36.95144054487128 39.0 35.0 40.0 33.0 40.0 25 36.89387131302384 39.0 35.0 40.0 33.0 40.0 26 36.730329490393714 39.0 35.0 40.0 32.0 40.0 27 36.6411619290941 39.0 35.0 40.0 32.0 40.0 28 36.51739596507268 38.0 35.0 40.0 32.0 40.0 29 36.425282486325656 38.0 35.0 40.0 31.0 40.0 30 36.243678900573094 38.0 35.0 40.0 31.0 40.0 31 36.10727790538022 38.0 35.0 40.0 31.0 40.0 32 35.9937688948071 38.0 35.0 40.0 31.0 40.0 33 35.88178580416618 38.0 35.0 40.0 30.0 40.0 34 35.62999627280518 38.0 34.0 40.0 29.0 40.0 35 35.53797438111045 38.0 34.0 40.0 29.0 40.0 36 35.434460305375126 37.0 34.0 40.0 29.0 40.0 37 35.33965655651797 37.0 34.0 40.0 29.0 40.0 38 35.179843521530124 37.0 34.0 40.0 29.0 40.0 39 35.035643291527165 36.0 34.0 40.0 28.0 40.0 40 34.722260272881634 36.0 34.0 40.0 26.0 40.0 41 34.54283406974633 35.0 33.0 40.0 26.0 40.0 42 34.47363248584781 35.0 33.0 40.0 26.0 40.0 43 34.352381581923424 35.0 33.0 40.0 26.0 40.0 44 34.193446986228494 35.0 33.0 40.0 25.0 40.0 45 34.05734703369448 35.0 33.0 39.0 24.0 40.0 46 33.9135967748615 35.0 33.0 39.0 24.0 40.0 47 33.71319634034067 35.0 33.0 39.0 23.0 40.0 48 33.51805539184923 35.0 33.0 39.0 23.0 40.0 49 33.81026348400333 35.0 33.0 39.0 25.0 40.0 50 33.87455440908034 35.0 33.0 39.0 26.0 40.0 51 33.86765511661023 35.0 33.0 39.0 26.0 40.0 52 33.42723767078994 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 8.0 15 31.0 16 71.0 17 202.0 18 452.0 19 808.0 20 1454.0 21 2346.0 22 3609.0 23 5225.0 24 7129.0 25 9440.0 26 12235.0 27 15915.0 28 19506.0 29 23076.0 30 28445.0 31 36518.0 32 47889.0 33 69897.0 34 143472.0 35 119099.0 36 116997.0 37 174028.0 38 285774.0 39 132007.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.9775699326875 0.8105852333000966 0.17513037217792418 0.03671446183448069 8 99.11726009767162 0.7109544485822324 0.10910805360789272 0.06267740013825662 9 97.07494847232797 1.3808938259177024 0.7645527844056716 0.7796049173486583 10 59.19621610084451 28.285267386408165 5.375921047182464 7.1425954655648605 11 38.29167051597756 26.102309905099887 18.7866547311482 16.819364847774352 12 32.93080160173808 16.4856694137473 25.827548748204098 24.755980236310524 13 26.04616305999509 17.4983036485096 28.227607363917567 28.227925927577736 14 24.11447266564514 18.69634193349028 31.260413049641777 25.928772351222808 15 25.455784956786843 20.341245392773065 28.77848357326486 25.424486077175235 16 29.327607682481226 21.384143175251427 24.499695771704538 24.78855337056281 17 31.61091271674275 20.984743986314506 22.434208640083593 24.970134656859152 18 30.084514939042844 20.638704210455895 23.63129123408376 25.6454896164175 19 30.340082635413445 22.69168771841521 21.631268934627553 25.336960711543792 20 29.94992179262143 22.947016492040685 22.944547623674378 24.15851409166351 21 28.73316789260582 21.483694319054248 25.101940371254088 24.681197417085844 22 29.355243080000893 21.100143672210734 24.469272942158398 25.07534030562997 23 28.12566699266348 22.44169488609756 23.687199156443427 25.745438964795532 24 28.301036287586527 23.287799967506505 22.26130821352685 26.149855531380112 25 30.161686985718788 23.312170087509436 19.747920575708246 26.778222351063523 26 27.332523119757635 22.571270654871316 22.749825586396057 27.34638063897499 27 27.519838551937028 21.1920492881695 23.466753103606457 27.821359056287015 28 28.717876836917704 21.866368915832297 21.39234618950078 28.023408057749222 29 31.191842221790388 21.98790095218678 21.158440822021667 25.66181600400116 30 28.633935312463166 22.01434173598081 22.240362652870736 27.111360298685288 31 30.174827736700767 21.602598205212338 22.43627930387469 25.786294754212207 32 31.67860749452867 21.352047886489398 22.62678037265577 24.342564246326166 33 33.13770869901787 21.788161537260798 21.35252573197965 23.721604031741684 34 28.832559754578558 23.085193479639006 25.536301921894562 22.545944843887877 35 28.823321408433657 25.883536311478807 24.088191163681195 21.20495111640635 36 29.41194741151098 25.693274165442855 22.59086231997171 22.30391610307446 37 30.04453519969163 25.336801429713706 20.286532084139033 24.33213128645563 38 30.694962552841748 24.346148087503067 21.026714748541774 23.932174611113414 39 30.723872205002085 22.052489734286052 21.56070708390011 25.662930976811747 40 29.753447655212177 23.12525285990526 22.06085203036549 25.06044745451707 41 27.841826771452872 23.552367087276885 22.929654772561474 25.676151368708766 42 27.5993201851492 22.09621259664425 22.477772220611705 27.826694997594842 43 26.817007476689103 22.19074636279941 24.854814611877966 26.137431548633522 44 27.913901799566116 20.794481840278554 24.34877623769946 26.94284012245587 45 28.7889165331354 21.7768525273248 23.316629978751806 26.117600960788 46 26.71817310112166 24.975709520912112 22.216390737443017 26.08972664052321 47 26.47996712423027 23.23396270893794 24.957551392282475 25.328518774549313 48 28.297054241834417 23.26852686606628 24.27184311376864 24.162575778330663 49 28.748140384633764 23.45257702072894 22.748630972670423 25.050651621966875 50 25.611164382034286 23.68934946114957 23.559534769630687 27.139951387185455 51 27.252324718310085 23.700180625595316 22.39733489641903 26.650159759675574 52 26.747082753282005 25.006849118693637 22.63554087331042 25.610527254713944 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 8.0 4 16.0 5 45.0 6 74.0 7 203.5 8 333.0 9 1036.0 10 1739.0 11 2386.5 12 3034.0 13 3398.0 14 3159.0 15 2556.0 16 2753.0 17 2950.0 18 3119.5 19 3289.0 20 3361.5 21 3434.0 22 3867.5 23 4301.0 24 4585.5 25 4870.0 26 5592.0 27 6314.0 28 8926.0 29 11538.0 30 11582.0 31 11626.0 32 12209.0 33 12792.0 34 16703.5 35 20615.0 36 20701.0 37 20787.0 38 21443.0 39 23599.0 40 25099.0 41 27213.0 42 29327.0 43 34980.5 44 40634.0 45 39484.0 46 38334.0 47 43601.0 48 48868.0 49 49397.0 50 49926.0 51 57347.5 52 64769.0 53 69044.5 54 73320.0 55 90099.0 56 106878.0 57 109048.0 58 111218.0 59 114993.5 60 118769.0 61 115855.0 62 112941.0 63 101632.0 64 80087.5 65 69852.0 66 55799.5 67 41747.0 68 38503.5 69 35260.0 70 29906.5 71 24553.0 72 23089.0 73 21625.0 74 15473.0 75 9321.0 76 6621.0 77 3921.0 78 2661.0 79 1401.0 80 1254.0 81 1107.0 82 669.0 83 231.0 84 137.0 85 43.0 86 31.5 87 20.0 88 18.0 89 10.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1255636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.237131411134436 #Duplication Level Percentage of deduplicated Percentage of total 1 71.94655331912324 7.365263209060551 2 9.279407524349798 1.8998902848847712 3 3.8645057887232106 1.186843607947477 4 2.0150640254586105 0.8251390092187739 5 1.1420020468581848 0.5845412512735872 6 0.727688647328174 0.44696665854535067 7 0.4620775615220776 0.3311244103606646 8 0.37878832113962246 0.3102164656407446 9 0.2823294923424904 0.2601219702914053 >10 4.353866495716674 12.273293108823202 >50 3.3381186609790494 24.563701119010712 >100 2.0991570983183725 36.992569386412505 >500 0.07699761123879914 5.277430128621442 >1k 0.03188789960394712 6.1885975530280595 >5k 7.77753648876759E-4 0.5968289945256903 >10k+ 7.77753648876759E-4 0.897472842355067 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 11272 0.8977123943563262 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 7496 0.596988299156762 No Hit TCAAAGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 4647 0.37009133220137047 No Hit TCAAAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4511 0.35926016775562347 No Hit TCAAAGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 3854 0.30693608657286026 No Hit TCAAAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3838 0.30566183193218416 No Hit TCAAAGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 3761 0.2995294814739303 No Hit TCAAAGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 3190 0.2540545189848013 No Hit TCAAAGGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 2487 0.1980669557100943 No Hit TCAAAGGGGGTGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2370 0.1887489686501502 No Hit TCAAAGGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2291 0.18245733636181186 No Hit TCAAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2183 0.17385611753724806 No Hit TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGCTC 2162 0.17218365832136065 No Hit TCAAAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2081 0.1657327442029378 No Hit TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2020 0.1608746483853601 No Hit TCAAAGGGGATTGACAGTCTTGCATTTTTGTTTTGTCTCGTGATGGTGGTGG 1821 0.14502610629195087 No Hit TCAAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1768 0.1408051377947112 No Hit TCAAAGGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATT 1736 0.13825662851335896 No Hit TCAAAGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 1700 0.1353895555718377 No Hit TCAAAGGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 1683 0.1340356600161193 No Hit TCAAAGGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1661 0.13228355988518964 No Hit TCAAAGGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 1644 0.13092966432947128 No Hit TCAAAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 1573 0.125275159361471 No Hit TCAAAGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 1547 0.1232044955703723 No Hit TCAAAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT 1531 0.12193024092969618 No Hit TCAAAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1515 0.12065598628902008 No Hit TCAAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1482 0.11802783609262557 No Hit TCAAAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 1470 0.11707214511211848 No Hit TCAAAGGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGCG 1409 0.11221404929454078 No Hit TCAAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1336 0.10640026249645598 No Hit TCAAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1261 0.10042719386828666 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.04053722575650905 0.0 0.0 0.0 0.0 6 0.04053722575650905 0.0 0.0 0.0 0.0 7 0.07462353739459525 0.0 0.0 0.0 0.0 8 0.1470171291680073 0.0 0.0 0.0 0.0 9 0.21694185257510934 0.0 0.0 0.0 0.0 10 0.29180431271483137 0.0 0.0 0.0 0.0 11 0.3430930620020452 0.0 0.0 0.0 0.0 12 0.3728787642278495 0.0 0.0 0.0 0.0 13 0.3907979701123574 0.0 0.0 0.0 0.0 14 0.41564593560554175 0.0 0.0 0.0 0.0 15 0.43531724162097934 0.0 0.0 0.0 0.0 16 0.4582538251531495 0.0 0.0 0.0 0.0 17 0.47999579495968575 0.0 0.0 0.0 0.0 18 0.5016581238511798 0.0 0.0 0.0 0.0 19 0.5320013124822799 0.0 0.0 0.0 0.0 20 0.5590792235966474 0.0 0.0 0.0 0.0 21 0.5823343707889866 0.0 0.0 0.0 0.0 22 0.6032002905300581 0.0 0.0 0.0 0.0 23 0.628526101513496 0.0 0.0 0.0 0.0 24 0.6541704761571029 0.0 0.0 0.0 0.0 25 0.6786202370750759 0.0 0.0 0.0 0.0 26 0.7041849708036405 0.0 0.0 0.0 0.0 27 0.7251305314597543 0.0 0.0 0.0 0.0 28 0.7500581378679808 0.0 0.0 0.0 0.0 29 0.7678180619224043 0.0 0.0 0.0 0.0 30 0.7861354723821234 0.0 0.0 0.0 0.0 31 0.802063655390575 0.0 0.0 0.0 0.0 32 0.820619988595421 0.0 0.0 0.0 0.0 33 0.837026017094126 0.0 0.0 0.0 0.0 34 0.8535913274229155 0.0 0.0 0.0 0.0 35 0.8758907836347477 0.0 0.0 0.0 0.0 36 0.8950842441599317 0.0 0.0 0.0 0.0 37 0.9138795001099045 0.0 0.0 0.0 0.0 38 0.9308430150139053 0.0 0.0 0.0 0.0 39 0.9497179118789203 0.0 0.0 0.0 0.0 40 0.9670796313581325 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 70 0.0 46.000004 38 ATAGCCG 70 0.0 46.000004 15 ACGTGCG 55 1.8189894E-12 46.000004 31 CGATAAT 35 1.0196709E-7 46.000004 14 ATTTACG 20 6.311679E-4 46.0 44 GTCGCAA 20 6.311679E-4 46.0 18 CGAACTA 40 5.6115823E-9 46.0 44 TACCCGA 25 3.4173387E-5 46.0 20 GGTAATC 20 6.311679E-4 46.0 23 CTATCGA 25 3.4173387E-5 46.0 44 GCGCGTA 25 3.4173387E-5 46.0 27 CGCATAC 25 3.4173387E-5 46.0 24 CACGCAA 30 1.861541E-6 46.0 34 GATTTCG 30 1.861541E-6 46.0 9 GTCTAGC 30 1.861541E-6 46.0 10 TACGGTC 20 6.311679E-4 46.0 20 TAACGTC 20 6.311679E-4 46.0 23 CGATTCA 20 6.311679E-4 46.0 10 CGTTATG 65 0.0 46.0 19 TACGCTT 20 6.311679E-4 46.0 21 >>END_MODULE