##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527743_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 934379 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16795647162447 33.0 31.0 34.0 31.0 34.0 2 32.816721052164056 34.0 31.0 34.0 31.0 34.0 3 33.11072380693487 34.0 31.0 34.0 31.0 34.0 4 36.568158102868324 37.0 37.0 37.0 35.0 37.0 5 36.24730864028408 37.0 37.0 37.0 35.0 37.0 6 36.102623239606196 37.0 37.0 37.0 35.0 37.0 7 36.55570277157342 37.0 37.0 37.0 35.0 37.0 8 36.6177386264032 37.0 37.0 37.0 35.0 37.0 9 38.49586088728449 39.0 39.0 39.0 37.0 39.0 10 37.864786130681445 39.0 38.0 39.0 35.0 39.0 11 36.89671535854295 39.0 35.0 39.0 34.0 39.0 12 36.694595019793894 39.0 35.0 39.0 33.0 39.0 13 36.66610336918959 39.0 35.0 39.0 33.0 39.0 14 37.555740229607046 40.0 36.0 40.0 33.0 40.0 15 37.64198574668309 40.0 36.0 40.0 33.0 40.0 16 37.67894291288653 40.0 36.0 40.0 33.0 40.0 17 37.6368828922739 40.0 36.0 40.0 33.0 40.0 18 37.59039426185734 40.0 36.0 40.0 33.0 40.0 19 37.591122017939185 40.0 36.0 40.0 33.0 40.0 20 37.564848953154986 40.0 35.0 40.0 33.0 40.0 21 37.474176966734056 40.0 35.0 40.0 33.0 40.0 22 37.446614275363636 40.0 35.0 40.0 33.0 40.0 23 37.311959065860854 40.0 35.0 40.0 33.0 40.0 24 37.12887918071789 39.0 35.0 40.0 33.0 40.0 25 37.069060841478674 39.0 35.0 40.0 33.0 40.0 26 36.878222862457314 39.0 35.0 40.0 33.0 40.0 27 36.75870283899788 39.0 35.0 40.0 32.0 40.0 28 36.543703358059204 38.0 35.0 40.0 32.0 40.0 29 36.44865627331094 38.0 35.0 40.0 32.0 40.0 30 36.23621250049498 38.0 35.0 40.0 31.0 40.0 31 36.056843101139904 38.0 35.0 40.0 31.0 40.0 32 35.912232616529266 38.0 35.0 40.0 31.0 40.0 33 35.71993912534421 38.0 35.0 40.0 30.0 40.0 34 35.49977471668349 37.0 35.0 40.0 29.0 40.0 35 35.26607832581854 37.0 34.0 40.0 29.0 40.0 36 35.15384442501383 37.0 34.0 40.0 29.0 40.0 37 34.87931235612102 36.0 34.0 40.0 28.0 40.0 38 34.64435309440816 36.0 34.0 40.0 27.0 40.0 39 34.468543278476936 36.0 34.0 40.0 26.0 40.0 40 34.203559797469765 35.0 33.0 40.0 25.0 40.0 41 33.96048070429665 35.0 33.0 39.0 23.0 40.0 42 33.84461337423037 35.0 33.0 39.0 23.0 40.0 43 33.72440626341131 35.0 33.0 39.0 23.0 40.0 44 33.62202703613844 35.0 33.0 39.0 23.0 40.0 45 33.47234687423412 35.0 33.0 39.0 23.0 40.0 46 33.285928943180444 35.0 33.0 39.0 23.0 40.0 47 33.123946492804315 35.0 33.0 38.0 23.0 40.0 48 32.87093673980259 35.0 32.0 38.0 22.0 40.0 49 33.121170317397976 35.0 33.0 38.0 23.0 40.0 50 33.164282373640674 35.0 33.0 38.0 23.0 40.0 51 33.13708677099978 35.0 33.0 38.0 23.0 40.0 52 32.66039904578335 35.0 33.0 37.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 3.0 15 17.0 16 38.0 17 131.0 18 328.0 19 643.0 20 1129.0 21 1852.0 22 3091.0 23 4473.0 24 6378.0 25 8551.0 26 11511.0 27 14909.0 28 17268.0 29 18087.0 30 19844.0 31 23562.0 32 30364.0 33 44746.0 34 93324.0 35 89595.0 36 112685.0 37 148085.0 38 203994.0 39 79769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.27920041011195 0.5102854409185138 0.12007975350473417 0.09043439546479533 8 98.68190530823145 0.8676350816959713 0.21447399823840219 0.23598561183417005 9 91.73996847103798 4.336356018275239 2.538584450207036 1.385091060479741 10 47.28969722136306 37.38697038353816 6.73281398661571 8.590518408483067 11 33.014975721843065 25.662926927938233 22.034206676305867 19.287890673912834 12 28.662138168773055 21.488068546061072 25.711408325743623 24.138384959422247 13 22.374967759335345 21.478115411412286 28.3726410803325 27.77427574891987 14 24.548925007946455 23.16404799337314 27.866850603448924 24.420176395231486 15 25.088320692138844 23.789597154901813 26.362642996043363 24.75943915691598 16 29.611859855583226 24.49198879683726 23.345344876115583 22.550806471463936 17 28.426901717611376 25.420519938911294 21.845846278651383 24.306732064825944 18 26.673758721032897 25.58372994256078 22.564719455381596 25.177791881024724 19 26.64068862849015 25.685080679253282 22.329804073079554 25.344426619177014 20 28.062381538968662 25.522298767416647 21.862862928212216 24.552456765402475 21 28.21970528019144 23.606159813095115 24.34204963938616 23.832085267327283 22 27.87594755447201 23.094911165597686 23.604982560609773 25.424158719320534 23 26.885236076581343 24.791867111739453 22.233697461094483 26.089199350584718 24 27.711453275383974 25.732277801620114 22.62540146985324 23.930867453142675 25 27.67356714994665 25.911327202345085 20.818532950761952 25.596572696946314 26 27.146586128326945 25.931768586408726 21.848307806575278 25.073337478689055 27 27.6011126106216 24.43226998894453 20.86904778467838 27.09756961575549 28 27.233488766335718 26.006042515938393 21.38147368466115 25.378995033064744 29 28.954417853997143 24.479360088358153 21.552175295035525 25.014046762609176 30 27.262599009609588 25.44053323116209 22.503395303190675 24.793472456037648 31 28.998832379580445 24.996173929422643 21.0233748832112 24.981618807785704 32 29.255901513197536 24.09140188296184 22.202767827615986 24.449928776224635 33 29.788233682477884 24.77998756393284 21.624415788454147 23.80736296513513 34 27.99955906543276 25.927915760093068 23.576621478008388 22.49590369646578 35 27.578102675680853 26.560207367674142 22.903982217066094 22.957707739578908 36 28.75471302330211 26.707899043107773 21.425460118431598 23.111927815158516 37 30.177690209219172 25.30793179213146 21.156832505867534 23.357545492781835 38 28.853281163211076 26.722775233604352 21.562556521497164 22.861387081687408 39 28.654539539094948 24.913231140682743 22.407716783018454 24.024512537203854 40 28.275036147002446 24.612710688061266 22.468291774536887 24.6439613903994 41 26.1786705394706 25.61722812691638 22.9744033202801 25.229698013332918 42 27.021583318974418 23.76326950841147 22.79535391955513 26.41979325305898 43 27.410825799809285 23.10861010360892 23.463926308275333 26.016637788306458 44 25.646980507909532 23.738012091453253 23.948098148609933 26.66690925202728 45 27.270090616334485 24.181943301379846 23.031339531389296 25.51662655089637 46 27.444752075977735 24.539078896250878 22.9358750571235 25.080293970647883 47 27.04898119499689 24.576322883968924 23.150456078315116 25.224239842719072 48 27.15150918417473 23.94103463369789 24.65327238732891 24.25418379479847 49 28.11321744174473 23.890305753875033 23.955161663521977 24.04131514085826 50 25.472426071219495 23.78799181060362 24.62416214405504 26.11541997412185 51 25.450486365810875 24.32514001277854 25.06466861947882 25.159705001931766 52 27.061823949382426 24.139241143047947 23.887309111185075 24.911625796384552 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 11.5 4 23.0 5 41.5 6 60.0 7 545.5 8 1031.0 9 2254.0 10 3477.0 11 3151.5 12 2826.0 13 3165.0 14 3274.5 15 3045.0 16 2996.5 17 2948.0 18 3144.5 19 3341.0 20 3916.5 21 4492.0 22 4855.5 23 5219.0 24 6482.5 25 7746.0 26 8018.5 27 8291.0 28 10505.5 29 12720.0 30 12965.0 31 13210.0 32 13596.0 33 13982.0 34 14618.0 35 15254.0 36 17516.5 37 19779.0 38 21028.5 39 22365.0 40 22452.0 41 25301.0 42 28150.0 43 28779.5 44 29409.0 45 32631.5 46 35854.0 47 37334.0 48 38814.0 49 42029.0 50 45244.0 51 47864.5 52 50485.0 53 52731.0 54 54977.0 55 58930.0 56 62883.0 57 70196.5 58 77510.0 59 74162.5 60 70815.0 61 70906.5 62 70998.0 63 66562.0 64 52256.5 65 42387.0 66 37678.0 67 32969.0 68 26832.5 69 20696.0 70 18330.5 71 15965.0 72 16482.5 73 17000.0 74 12444.5 75 7889.0 76 5007.5 77 2126.0 78 1852.0 79 1578.0 80 1005.0 81 432.0 82 333.5 83 235.0 84 164.5 85 94.0 86 77.0 87 60.0 88 32.5 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 934379.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.81464495496151 #Duplication Level Percentage of deduplicated Percentage of total 1 76.47042296116562 9.79941319803074 2 8.181539010387485 2.0968703520656558 3 3.458866416852528 1.3297243523581515 4 1.794241460555485 0.9197026912196048 5 0.9755833491420904 0.6250877121614071 6 0.5114527811451868 0.39324514809619215 7 0.372700303444534 0.3343215444273685 8 0.26656887476531826 0.2732788388928922 9 0.2013884280789217 0.23226490834822644 >10 3.1954719999186714 11.417165926730654 >50 2.7099674641503624 25.21566093340171 >100 1.789932256617353 39.23946026538977 >500 0.055151974293531886 4.564553342791543 >1k 0.01671271948288845 3.5592507860860816 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3172 0.339476807590924 No Hit AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2926 0.3131491611005813 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2809 0.3006274755746865 No Hit AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2501 0.2676644059851516 No Hit AAAACGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2055 0.21993216885225372 No Hit AAAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1908 0.20419979472997576 No Hit AAAACGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1610 0.17230695467256862 No Hit AAAACGGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 1606 0.1718788628597175 No Hit AAAACGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1581 0.16920328902939813 No Hit AAAACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1523 0.16299595774305714 No Hit AAAACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1403 0.1501532033575241 No Hit AAAACGGGGGGGCCAGGTGGTGGTGGCGCACGCCTTTAAAAACCCAGCACTT 1259 0.1347418980948844 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1167 0.12489578639930905 No Hit AAAACGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1166 0.12478876344609628 No Hit AAAACGGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1142 0.12222021256898968 No Hit AAAACGGGGGCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTTCA 1132 0.12114998303686192 No Hit AAAACGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1096 0.117297156721202 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1090 0.11665501900192535 No Hit AAAACGGGGTGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAG 1064 0.1138724222183932 No Hit AAAACGGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 1028 0.11001959590273326 No Hit AAAACGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTG 994 0.1063808154934989 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 982 0.10509654005494559 No Hit AAAACGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 980 0.10488249414852004 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 953 0.1019928744117751 No Hit AAAACGGGGCAGGGTGTCACTGGAGAGTCGTTCCTGTAAATGGCTTAACCTT 942 0.10081562192643456 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.05575895862385606 0.0 0.0 0.0 0.0 8 0.08422706417845435 0.0 0.0 0.0 0.0 9 0.15646755759707784 0.0 0.0 0.0 0.0 10 0.23652072660023396 0.0 0.0 0.0 0.0 11 0.2888549507212812 0.0 0.0 0.0 0.0 12 0.33776444033951963 0.0 0.0 0.0 0.0 13 0.366660637706969 0.0 0.0 0.0 0.0 14 0.40765042878746205 0.0 0.0 0.0 0.0 15 0.4484261739615295 0.0 0.0 0.0 0.0 16 0.4870614600713415 0.0 0.0 0.0 0.0 17 0.5232352182572596 0.0 0.0 0.0 0.0 18 0.5561982878467945 0.0 0.0 0.0 0.0 19 0.5972951018805003 0.0 0.0 0.0 0.0 20 0.6370006175224401 0.0 0.0 0.0 0.0 21 0.6769201790708053 0.0 0.0 0.0 0.0 22 0.7194082914962772 0.0 0.0 0.0 0.0 23 0.7659632761438345 0.0 0.0 0.0 0.0 24 0.8145516969024347 0.0 0.0 0.0 0.0 25 0.8608926356435664 0.0 0.0 0.0 0.0 26 0.899741967659804 0.0 0.0 0.0 0.0 27 0.9337752667814666 0.0 0.0 0.0 0.0 28 0.972196506984853 0.0 0.0 0.0 0.0 29 0.9975609468962808 0.0 0.0 0.0 0.0 30 1.0235675245269853 0.0 0.0 0.0 0.0 31 1.0422965413392211 0.0 0.0 0.0 0.0 32 1.0624168565432228 0.0 0.0 0.0 0.0 33 1.0786843454315647 0.0 0.0 0.0 0.0 34 1.1009451196998221 0.0 0.0 0.0 0.0 35 1.1268446743773137 0.0 0.0 0.0 0.0 36 1.14675094367489 0.0 0.0 0.0 0.0 37 1.1632324784696575 0.0 0.0 0.0 0.0 38 1.1799280591708503 0.0 0.0 0.0 0.0 39 1.1992992137023628 0.0 0.0 0.0 0.0 40 1.219205482999939 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAAA 105 0.0 46.000004 42 TGATCGT 30 1.8610262E-6 46.0 9 AGGTATA 40 5.6097633E-9 46.0 36 AACGTAC 20 6.310846E-4 46.0 28 CTATGCG 20 6.310846E-4 46.0 14 TAATAGG 20 6.310846E-4 46.0 14 GGTACGA 20 6.310846E-4 46.0 6 CTCAATT 50 1.6370905E-11 46.0 31 AGTCAAT 50 1.6370905E-11 46.0 14 TTTACGG 20 6.310846E-4 46.0 20 CCGATTA 80 0.0 46.0 40 ACGTTAG 20 6.310846E-4 46.0 30 TTTCGAA 30 1.8610262E-6 46.0 42 TTATGCG 25 3.416661E-5 46.0 37 CGCATAT 20 6.310846E-4 46.0 42 CAACCGA 20 6.310846E-4 46.0 28 TTCCGTA 25 3.416661E-5 46.0 44 CGACATA 20 6.310846E-4 46.0 46 CGATTAG 80 0.0 46.0 41 CCGCTTA 30 1.8610262E-6 46.0 21 >>END_MODULE