##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527742_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 944290 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12788550127609 33.0 31.0 34.0 31.0 34.0 2 32.791196560378694 34.0 31.0 34.0 31.0 34.0 3 33.093984898706964 34.0 31.0 34.0 31.0 34.0 4 36.54954833790467 37.0 37.0 37.0 35.0 37.0 5 36.24879327325292 37.0 37.0 37.0 35.0 37.0 6 35.98930307426744 37.0 37.0 37.0 35.0 37.0 7 36.50081754545744 37.0 37.0 37.0 35.0 37.0 8 36.57673701934787 37.0 37.0 37.0 35.0 37.0 9 38.44718571625242 39.0 39.0 39.0 37.0 39.0 10 37.763642525071745 39.0 38.0 39.0 35.0 39.0 11 36.85845026421968 39.0 35.0 39.0 33.0 39.0 12 36.640442025225305 39.0 35.0 39.0 33.0 39.0 13 36.45084137288333 39.0 35.0 39.0 33.0 39.0 14 37.4740937635684 40.0 36.0 40.0 33.0 40.0 15 37.582393120757395 40.0 36.0 40.0 33.0 40.0 16 37.64986074193309 40.0 36.0 40.0 33.0 40.0 17 37.646280274068346 40.0 36.0 40.0 33.0 40.0 18 37.6101833123299 40.0 36.0 40.0 33.0 40.0 19 37.56171515106588 40.0 36.0 40.0 33.0 40.0 20 37.5465164303339 40.0 35.0 40.0 33.0 40.0 21 37.51406029927247 40.0 35.0 40.0 33.0 40.0 22 37.380827923625155 40.0 35.0 40.0 33.0 40.0 23 37.27602113757426 39.0 35.0 40.0 33.0 40.0 24 37.145337766999546 39.0 35.0 40.0 33.0 40.0 25 37.04173188321384 39.0 35.0 40.0 33.0 40.0 26 36.80472947929132 39.0 35.0 40.0 32.0 40.0 27 36.683602494996244 39.0 35.0 40.0 32.0 40.0 28 36.486161031039195 38.0 35.0 40.0 31.0 40.0 29 36.397252962543284 38.0 35.0 40.0 31.0 40.0 30 36.17494837391056 38.0 35.0 40.0 31.0 40.0 31 36.013742600260514 38.0 35.0 40.0 31.0 40.0 32 35.874818117315655 38.0 35.0 40.0 30.0 40.0 33 35.5143737622976 38.0 35.0 40.0 30.0 40.0 34 35.39765432229506 37.0 34.0 40.0 29.0 40.0 35 35.24889811392686 37.0 34.0 40.0 29.0 40.0 36 34.99477702824344 37.0 34.0 40.0 28.0 40.0 37 34.800301814061356 36.0 34.0 40.0 27.0 40.0 38 34.295228160840416 36.0 33.0 40.0 24.0 40.0 39 34.27794851158013 35.0 33.0 40.0 25.0 40.0 40 34.098623304281524 35.0 33.0 40.0 24.0 40.0 41 33.687846953795976 35.0 33.0 39.0 23.0 40.0 42 33.70215294030436 35.0 33.0 39.0 23.0 40.0 43 33.683516716263014 35.0 33.0 39.0 23.0 40.0 44 33.56781603109214 35.0 33.0 39.0 23.0 40.0 45 33.41404653231528 35.0 33.0 39.0 23.0 40.0 46 33.065955373878786 35.0 33.0 39.0 22.0 40.0 47 32.83474356394752 35.0 32.0 38.0 22.0 40.0 48 32.73480710374991 35.0 32.0 38.0 22.0 40.0 49 32.66932616039564 35.0 32.0 38.0 22.0 40.0 50 32.51567844624003 35.0 32.0 37.0 21.0 40.0 51 32.76684916709909 35.0 33.0 37.0 22.0 40.0 52 32.501584259072956 35.0 32.0 37.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 4.0 15 13.0 16 50.0 17 160.0 18 327.0 19 649.0 20 1105.0 21 1947.0 22 3197.0 23 4659.0 24 6632.0 25 8914.0 26 11784.0 27 15407.0 28 17990.0 29 18857.0 30 20755.0 31 24807.0 32 32848.0 33 49747.0 34 95636.0 35 91023.0 36 117664.0 37 150879.0 38 200900.0 39 68333.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.25340732190323 0.5296042529307734 0.12474981202808459 0.09223861313791314 8 98.71141280750618 0.841690582342289 0.20946954854970404 0.23742706160183844 9 91.74141418420189 4.297408635059145 2.551758464031177 1.409418716707791 10 47.167607408740956 37.31163096082771 6.874053521693548 8.646708108737782 11 32.919018521852394 25.791229389276598 22.009763949634117 19.279988139236888 12 28.733334039331137 21.39268656874477 25.731713774370164 24.142265617553928 13 22.53767380783446 21.48683137595442 28.491670990903216 27.4838238253079 14 24.56597019983268 23.158563576867273 27.891325757976894 24.384140465323153 15 25.034258543455927 23.812388143472873 26.424509419775706 24.72884389329549 16 29.6808183926548 24.514079361213188 23.243601012400852 22.561501233731164 17 28.486481907041266 25.399506507534763 21.79849410668333 24.31551747874064 18 26.705673045356832 25.62263711359858 22.55144076501922 25.120249076025374 19 26.63556746338519 25.7258892924843 22.353302481229285 25.28524076290123 20 27.98684726090502 25.526692011987844 21.953425324847238 24.533035402259898 21 28.29522710184371 23.604295290641648 24.36677291933622 23.73370468817842 22 28.05314045473318 23.045992226964174 23.49098264304398 25.40988467525866 23 26.861769159897914 24.70988785224878 22.31655529551303 26.111787692340275 24 27.747831704243396 25.734361266136464 22.581092672801788 23.93671435681835 25 27.611221129102287 25.947431403488334 20.871448389795507 25.56989907761387 26 27.3242330216353 25.837507545351535 21.846890256171303 24.99136917684186 27 27.644367726016373 24.472672589988246 20.902688792637854 26.980270891357527 28 27.264082008704953 26.03776382255451 21.43186944688602 25.266284721854515 29 28.98039797096231 24.404049603405735 21.588706859121668 25.026845566510286 30 27.173325990956172 25.40766078217497 22.598672018130024 24.820341208738842 31 28.953499454616693 24.95832847959843 21.06185599762785 25.02631606815703 32 29.20691736648699 24.081161507587712 22.226540575458813 24.485380550466488 33 29.83479651378284 24.693367503627066 21.65415285558462 23.817683127005477 34 27.953594764320282 25.832742060172194 23.661375213123087 22.552287962384437 35 27.46582088129706 26.60062057207002 22.90758135742198 23.02597718921094 36 28.924800643869997 26.620847409164554 21.42191487784473 23.032437069120714 37 30.131950989632422 25.33437821008377 21.05518431837677 23.47848648190704 38 28.867720721388558 26.668184561946013 21.504198921941352 22.959895794724076 39 28.69944614472249 24.892141185440913 22.446494191403065 23.96191847843353 40 28.28876722193394 24.558027724533776 22.391108663652055 24.762096389880227 41 26.368488494000786 25.552002033273673 23.027565684270723 25.051943788454818 42 27.061072340065024 23.793114403414208 22.733164599858092 26.41264865666268 43 27.257622128795177 23.114191614864076 23.613190862976417 26.014995393364327 44 25.687024113355005 23.6805430535111 23.998453864808482 26.633978968325405 45 27.232206207838694 24.237045822787493 23.00077306759576 25.529974901778058 46 27.514746529138296 24.645818551504306 23.004161857056623 24.835273062300775 47 27.296699107265777 24.543413569983798 23.144902519353163 25.01498480339726 48 27.15881773607684 23.930148577237926 24.65492592318038 24.256107763504854 49 28.17333658092323 23.874763049486916 23.86396128308041 24.08793908650944 50 25.435830094568406 23.828908492094588 24.668375181353184 26.066886231983823 51 25.525209416598717 24.330343432631924 24.9594933759756 25.18495377479376 52 27.106079700092135 24.175941712821274 23.847335034788042 24.870643552298553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 12.5 4 25.0 5 42.0 6 59.0 7 532.5 8 1006.0 9 2152.5 10 3299.0 11 3117.0 12 2935.0 13 3199.0 14 3283.5 15 3104.0 16 3118.5 17 3133.0 18 3212.0 19 3291.0 20 3884.5 21 4478.0 22 4883.5 23 5289.0 24 6484.5 25 7680.0 26 7946.0 27 8212.0 28 10586.0 29 12960.0 30 13128.0 31 13296.0 32 13851.0 33 14406.0 34 15038.0 35 15670.0 36 17955.5 37 20241.0 38 21618.5 39 22850.5 40 22705.0 41 25545.5 42 28386.0 43 29059.5 44 29733.0 45 32851.5 46 35970.0 47 37526.0 48 39082.0 49 42373.0 50 45664.0 51 48151.0 52 50638.0 53 53288.0 54 55938.0 55 59692.0 56 63446.0 57 70813.0 58 78180.0 59 74901.0 60 71622.0 61 71555.0 62 71488.0 63 66886.5 64 52706.0 65 43127.0 66 38171.5 67 33216.0 68 27319.0 69 21422.0 70 18879.5 71 16337.0 72 16727.0 73 17117.0 74 12474.5 75 7832.0 76 5016.0 77 2200.0 78 1882.5 79 1565.0 80 993.0 81 421.0 82 318.0 83 215.0 84 145.5 85 76.0 86 77.0 87 78.0 88 39.5 89 0.5 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 944290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.02377253406569 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70795661612928 12.611983934379662 2 8.45836887659946 2.7106995777570093 3 3.1847847157885334 1.5309679756729353 4 1.4809251240246213 0.9492002930941421 5 0.8464801685643558 0.678190283783641 6 0.45442052791669846 0.4368918704488333 7 0.3075301641409354 0.3449455378290764 8 0.225738640301747 0.2893747699475574 9 0.15221135533408336 0.2195100121477678 >10 2.6523149672784245 11.896215353149458 >50 2.1670831951994027 25.09878232182722 >100 1.312129831155536 36.04400741334116 >500 0.03737501045000509 3.917480485878618 >1k 0.012680807116966012 3.2717501707429384 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2948 0.31219222908216754 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2864 0.30329665674739753 No Hit AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2690 0.2848701140539453 No Hit AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2318 0.24547543657139226 No Hit AAAACGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1981 0.2097872475616601 No Hit AAAACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1775 0.1879719154073431 No Hit AAAACGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1589 0.16827457666606657 No Hit AAAACGGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 1526 0.16160289741498904 No Hit AAAACGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1486 0.15736691058890806 No Hit AAAACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1432 0.15164832837369877 No Hit AAAACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1406 0.14889493693674613 No Hit AAAACGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1121 0.11871353080091922 No Hit AAAACGGGGGCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTTCA 1116 0.1181840324476591 No Hit AAAACGGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1106 0.11712503574113885 No Hit AAAACGGGGGGGCCAGGTGGTGGTGGCGCACGCCTTTAAAAACCCAGCACTT 1105 0.11701913607048682 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1077 0.11405394529223013 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1027 0.10875896175962893 No Hit AAAACGGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1022 0.1082294634063688 No Hit AAAACGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1004 0.10632326933463236 No Hit AAAACGGGGGCTCTTTCTTGACTCCATCTTCGCGGTAGCAGCAGCGGCGTCC 968 0.10251088119115949 No Hit AAAACGGGGCAGGGTGTCACTGGAGAGTCGTTCCTGTAAATGGCTTAACCTT 965 0.10219318217920342 No Hit AAAACGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTG 961 0.10176958349659533 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 956 0.10124008514333521 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.05210263796079594 0.0 0.0 0.0 0.0 8 0.07931885331836618 0.0 0.0 0.0 0.0 9 0.15186012771500282 0.0 0.0 0.0 0.0 10 0.23181437905728114 0.0 0.0 0.0 0.0 11 0.28169312393438456 0.0 0.0 0.0 0.0 12 0.33051287210496777 0.0 0.0 0.0 0.0 13 0.3569877897679738 0.0 0.0 0.0 0.0 14 0.39627656757987484 0.0 0.0 0.0 0.0 15 0.4385305361700325 0.0 0.0 0.0 0.0 16 0.47845471200584566 0.0 0.0 0.0 0.0 17 0.5186965868536149 0.0 0.0 0.0 0.0 18 0.5527962808035667 0.0 0.0 0.0 0.0 19 0.5880608711306908 0.0 0.0 0.0 0.0 20 0.6280909466371559 0.0 0.0 0.0 0.0 21 0.6653676307066685 0.0 0.0 0.0 0.0 22 0.7053977062131337 0.0 0.0 0.0 0.0 23 0.7535820563598047 0.0 0.0 0.0 0.0 24 0.8008133094706076 0.0 0.0 0.0 0.0 25 0.8433849770727213 0.0 0.0 0.0 0.0 26 0.881085259824842 0.0 0.0 0.0 0.0 27 0.9148672547628377 0.0 0.0 0.0 0.0 28 0.9504495441019178 0.0 0.0 0.0 0.0 29 0.973112073621451 0.0 0.0 0.0 0.0 30 0.9968335998475045 0.0 0.0 0.0 0.0 31 1.0133539484692202 0.0 0.0 0.0 0.0 32 1.0322040898452807 0.0 0.0 0.0 0.0 33 1.051054231221341 0.0 0.0 0.0 0.0 34 1.0694807739147931 0.0 0.0 0.0 0.0 35 1.0937317984941066 0.0 0.0 0.0 0.0 36 1.1118406421756029 0.0 0.0 0.0 0.0 37 1.1320674792701395 0.0 0.0 0.0 0.0 38 1.1527179150472842 0.0 0.0 0.0 0.0 39 1.1715680564233446 0.0 0.0 0.0 0.0 40 1.186817608997236 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 40 5.6097633E-9 46.000004 10 ATTAGTG 35 1.0193071E-7 46.000004 40 ATTACCG 20 6.310878E-4 46.000004 23 CCGGATA 20 6.310878E-4 46.000004 13 ACCGATA 20 6.310878E-4 46.000004 16 GCGCCTA 20 6.310878E-4 46.000004 45 CGATTAG 80 0.0 46.000004 41 CGCGAAT 20 6.310878E-4 46.000004 19 TCTACTA 40 5.6097633E-9 46.000004 31 ATTCACG 40 5.6097633E-9 46.000004 10 CTACGAA 20 6.310878E-4 46.000004 39 TACGAAT 20 6.310878E-4 46.000004 24 GTCCGTA 35 1.0193071E-7 46.000004 28 TACTCAC 20 6.310878E-4 46.000004 26 ATGCGTC 20 6.310878E-4 46.000004 21 TTAGTCA 20 6.310878E-4 46.000004 40 TAGGCGG 20 6.310878E-4 46.000004 31 CGGTATG 20 6.310878E-4 46.000004 33 AATAGGT 40 5.6097633E-9 46.000004 46 CGTCCCA 20 6.310878E-4 46.000004 39 >>END_MODULE