##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527740_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2135623 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14945193978525 33.0 31.0 34.0 31.0 34.0 2 32.56520977719382 34.0 31.0 34.0 31.0 34.0 3 32.85505306882348 34.0 31.0 34.0 31.0 34.0 4 35.71710550036219 37.0 35.0 37.0 35.0 37.0 5 36.07723273255626 37.0 35.0 37.0 35.0 37.0 6 36.042700420439374 37.0 35.0 37.0 35.0 37.0 7 36.391044674083396 37.0 36.0 37.0 35.0 37.0 8 36.58718182001224 37.0 37.0 37.0 35.0 37.0 9 38.70296770544239 39.0 39.0 39.0 38.0 39.0 10 38.131012823892604 39.0 38.0 39.0 37.0 39.0 11 37.70010343585923 39.0 38.0 39.0 35.0 39.0 12 37.142551845527045 39.0 37.0 39.0 34.0 39.0 13 36.99896704615 39.0 37.0 39.0 33.0 39.0 14 37.782725696436124 40.0 37.0 40.0 33.0 40.0 15 37.85934877082706 40.0 37.0 40.0 33.0 40.0 16 37.92520402711527 40.0 37.0 40.0 34.0 40.0 17 37.80944155405706 40.0 37.0 40.0 33.0 40.0 18 37.78952839522706 40.0 37.0 40.0 33.0 40.0 19 37.80039688652913 40.0 37.0 40.0 34.0 40.0 20 37.73942264154301 40.0 37.0 40.0 33.0 40.0 21 37.71979230416604 40.0 37.0 40.0 33.0 40.0 22 37.71475817595147 40.0 37.0 40.0 33.0 40.0 23 37.64845480686432 40.0 37.0 40.0 33.0 40.0 24 37.56023230691934 40.0 36.0 40.0 33.0 40.0 25 37.54913296962994 40.0 36.0 40.0 33.0 40.0 26 37.406084313570325 40.0 36.0 40.0 33.0 40.0 27 37.30360695684585 40.0 36.0 40.0 33.0 40.0 28 37.1531281504273 39.0 35.0 40.0 33.0 40.0 29 37.035482386170216 39.0 35.0 40.0 32.0 40.0 30 36.8951753188648 39.0 35.0 40.0 32.0 40.0 31 36.77716572634777 39.0 35.0 40.0 31.0 40.0 32 36.693492250270765 39.0 35.0 40.0 31.0 40.0 33 36.53042039723303 38.0 35.0 40.0 31.0 40.0 34 36.24299888135687 38.0 35.0 40.0 30.0 40.0 35 36.140923280934885 38.0 35.0 40.0 30.0 40.0 36 36.133186428503535 38.0 35.0 40.0 30.0 40.0 37 36.018270546814676 38.0 35.0 40.0 30.0 40.0 38 35.92346355138524 38.0 35.0 40.0 30.0 40.0 39 35.81144612134258 38.0 34.0 40.0 30.0 40.0 40 35.5072402760225 38.0 34.0 40.0 29.0 40.0 41 35.34965253698804 38.0 34.0 40.0 28.0 40.0 42 35.27798632998427 37.0 34.0 40.0 28.0 40.0 43 35.10779617938185 37.0 34.0 40.0 28.0 40.0 44 34.92647204117955 37.0 34.0 40.0 28.0 40.0 45 34.771809912142736 36.0 33.0 40.0 27.0 40.0 46 34.56565133452861 36.0 33.0 39.0 27.0 40.0 47 34.3548627262396 36.0 33.0 39.0 26.0 40.0 48 34.0663932725954 35.0 33.0 39.0 26.0 40.0 49 34.45824145928378 35.0 33.0 39.0 27.0 40.0 50 34.569411829709644 35.0 33.0 39.0 27.0 40.0 51 34.58091760577592 35.0 34.0 39.0 28.0 40.0 52 34.078500278373106 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 16.0 16 45.0 17 133.0 18 323.0 19 610.0 20 1128.0 21 1899.0 22 3365.0 23 4887.0 24 7473.0 25 10307.0 26 14335.0 27 18835.0 28 24552.0 29 32122.0 30 41217.0 31 52405.0 32 68300.0 33 95345.0 34 171857.0 35 175088.0 36 244926.0 37 374714.0 38 616717.0 39 175021.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.71839599030353 0.2495290601384233 0.01713785626021072 0.014937093297833935 8 99.72935298037153 0.2105240484860858 0.03886453742069644 0.02125843372168215 9 99.19981195182858 0.41247916884206626 0.1102722718382411 0.2774366074911162 10 65.7058385304897 23.252231316107757 4.378300851788916 6.663629301613627 11 37.22042701356934 27.455922697966823 17.8320799129809 17.49157037548294 12 31.34630971852242 17.85610100659152 25.90906728387922 24.88852199100684 13 24.10359880934041 17.077967412787746 29.943065793915874 28.875367983955968 14 25.498882527487293 16.683937193034538 29.71947764188717 28.097702637591 15 25.727527751855078 16.729076246135204 28.261495591684486 29.28190041032523 16 31.858759715549045 16.98310048168614 24.924249270587552 26.233890532177263 17 32.211162737992616 17.432383899218166 22.496901372573717 27.859551990215504 18 30.025383693657542 19.104870101136765 23.221139686171202 27.64860651903449 19 31.53922766330949 19.306544273029463 21.476168780725814 27.678059282935237 20 30.200742359489478 19.993791038961465 22.523404177609997 27.282062423939056 21 32.48639858252135 19.954270955126443 22.92726759357808 24.632062868774124 22 32.4741304996247 17.9088256682008 23.48317095292568 26.13387287924882 23 31.454943124324846 19.198706887872998 22.729058452732527 26.617291535069626 24 31.18237629019729 19.05340970761225 22.584604117861627 27.179609884328837 25 29.476831819099157 19.657167955205576 22.30192313905591 28.564077086639355 26 28.475812444424882 18.240813102312533 23.52367435638219 29.759700096880394 27 28.47955842393531 16.886875633012004 24.9908808811293 29.642685061923384 28 31.887556933035466 20.135248590224023 20.891234080172392 27.08596039656812 29 32.105619765286285 20.581020151965024 20.876624760081718 26.43673532266697 30 30.907374569387947 19.343629470182705 23.158581828347042 26.5904141320823 31 32.40187991981731 19.813188001814925 20.767335807864963 27.017596270502796 32 33.979452365890424 20.742518693608375 20.385760969983934 24.892267970517267 33 35.48823926320329 19.11381362721791 20.77876104537177 24.619186064207025 34 30.501965936871816 21.97700624127011 24.553537773286767 22.967490048571307 35 29.976030413607646 22.89458392234959 24.130195263864458 22.99919040017831 36 30.905876177583778 23.463129962544887 21.184076028400145 24.44691783147119 37 31.15259575308938 24.095498128649112 19.602757602816602 25.149148515444907 38 32.337636371213456 22.829216579892613 20.819779521010965 24.013367527882963 39 32.849337172338 21.63457688927306 19.660913934716007 25.855172003672934 40 29.687074919121958 21.767371862917752 21.067435591394172 27.47811762656611 41 28.549561416036447 21.875677495513017 22.225083734348246 27.34967735410229 42 27.840541144200078 19.271285240887554 22.5920492521386 30.296124362773767 43 26.47850299420825 18.65034231229014 25.713714452410375 29.157440241091244 44 27.280657681622642 18.101603138756232 24.417277768594925 30.200461411026197 45 29.40636057955922 18.802616379389057 23.200349499888322 28.590673541163397 46 28.381788358713123 21.14694400650302 22.942064212644272 27.52920342213958 47 27.417339109009408 20.65917064950134 23.260238347311297 28.66325189417795 48 28.97098411095966 20.698924857055765 25.105929276843337 25.22416175514124 49 29.48502614927822 19.70488236921966 24.10327103613325 26.706820445368866 50 26.363407773750332 20.501230788392895 24.983576221083965 28.15178521677281 51 27.11447666559126 20.273475234158838 24.083136396264695 28.528911703985205 52 27.532153381004044 20.669565742642778 23.519319655201315 28.27896122115186 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 12.0 6 24.0 7 20.5 8 17.0 9 19.0 10 21.0 11 333.0 12 645.0 13 1340.0 14 3519.5 15 5004.0 16 4180.0 17 3356.0 18 2843.5 19 2331.0 20 2651.0 21 2971.0 22 3151.5 23 3332.0 24 4424.5 25 5517.0 26 5379.0 27 5241.0 28 5786.5 29 6332.0 30 7429.5 31 8527.0 32 10261.0 33 11995.0 34 13019.5 35 14044.0 36 18416.0 37 22788.0 38 24287.5 39 26644.0 40 27501.0 41 31970.0 42 36439.0 43 36442.5 44 36446.0 45 41159.5 46 45873.0 47 50619.5 48 55366.0 49 60492.5 50 65619.0 51 69929.0 52 74239.0 53 86402.0 54 98565.0 55 106626.5 56 114688.0 57 140862.0 58 167036.0 59 196586.5 60 226137.0 61 220929.0 62 215721.0 63 225119.5 64 206104.0 65 177690.0 66 160035.5 67 142381.0 68 116456.5 69 90532.0 70 79626.0 71 68720.0 72 58804.5 73 48889.0 74 50079.0 75 51269.0 76 38016.5 77 24764.0 78 16387.0 79 8010.0 80 5951.0 81 3892.0 82 2481.5 83 1071.0 84 629.5 85 188.0 86 126.5 87 65.0 88 42.0 89 16.5 90 14.0 91 9.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2135623.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.678266605892345 #Duplication Level Percentage of deduplicated Percentage of total 1 67.80071284756576 5.205919493131604 2 9.939586475353899 1.5263758982017805 3 4.306437985236416 0.9919793691716127 4 2.251915949015302 0.6916324412240225 5 1.2628326940304093 0.4848183051701379 6 0.8030493715646952 0.369961630354082 7 0.5245477633980791 0.28193323024264927 8 0.3630342811704057 0.22299791983238867 9 0.28867351170889416 0.19948609664640674 >10 5.116449974376225 11.144967352196119 >50 4.4241938052020116 24.572280545479167 >100 2.7594041307428117 37.159586824561316 >500 0.10732709989187512 5.500165930821472 >1k 0.04451635393242547 6.137006548400051 >5k 0.00548831760810725 2.9515860606058992 >10k+ 0.0018294392027024167 2.5593023539612902 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCGAATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 25282 1.1838231747831895 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17768 0.8319820492661859 No Hit GCGAATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 11609 0.5435884517070663 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 8896 0.4165529215596573 No Hit GCGAATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 8533 0.39955553953108763 No Hit GCGAATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7861 0.3680893116434876 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 7421 0.3474864243361305 No Hit GCGAATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 7304 0.3420079293021287 No Hit GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6668 0.3122273921942215 No Hit GCGAATGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 6142 0.2875975769131537 No Hit GCGAATGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 5151 0.24119425572771974 No Hit GCGAATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 5061 0.2369800287784876 No Hit GCGAATGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 4649 0.21768823429978043 No Hit GCGAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4630 0.21679856416605367 No Hit GCGAATGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 4388 0.2054669761470072 No Hit GCGAATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 4034 0.1888910168133608 No Hit GCGAATGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 3787 0.17732530507491256 No Hit GCGAATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3328 0.15583274763382862 No Hit GCGAATGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 3263 0.15278913928160542 No Hit GCGAATGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 3113 0.14576542769955184 No Hit GCGAATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 2884 0.13504256135095005 No Hit GCGAATGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2360 0.11050639555764291 No Hit GCGAATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 2330 0.1091016532412322 No Hit GCGAATGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGAGA 2194 0.1027334880735036 No Hit GCGAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2164 0.10132874575709289 No Hit GCGAATGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGCG 2143 0.1003454261356054 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 2141 0.10025177664784468 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0467779191364768 0.0 0.0 0.0 0.0 8 0.05558097098598395 0.0 0.0 0.0 0.0 9 0.07182915711246789 0.0 0.0 0.0 0.0 10 0.09692721983233932 0.0 0.0 0.0 0.0 11 0.12520936513607506 0.0 0.0 0.0 0.0 12 0.13771157175213042 0.0 0.0 0.0 0.0 13 0.14628049988223576 0.0 0.0 0.0 0.0 14 0.1533510362081697 0.0 0.0 0.0 0.0 15 0.16177949010663398 0.0 0.0 0.0 0.0 16 0.173579325564484 0.0 0.0 0.0 0.0 17 0.1839744187059233 0.0 0.0 0.0 0.0 18 0.19287112004319115 0.0 0.0 0.0 0.0 19 0.20378128536731435 0.0 0.0 0.0 0.0 20 0.21450415171591616 0.0 0.0 0.0 0.0 21 0.2246182963940733 0.0 0.0 0.0 0.0 22 0.23257850285373402 0.0 0.0 0.0 0.0 23 0.24208392586144653 0.0 0.0 0.0 0.0 24 0.2532750396488519 0.0 0.0 0.0 0.0 25 0.2630145863759662 0.0 0.0 0.0 0.0 26 0.2744866486266537 0.0 0.0 0.0 0.0 27 0.2858182366457001 0.0 0.0 0.0 0.0 28 0.29897598967608047 0.0 0.0 0.0 0.0 29 0.30918378384199835 0.0 0.0 0.0 0.0 30 0.3203748976294037 0.0 0.0 0.0 0.0 31 0.3297398464054751 0.0 0.0 0.0 0.0 32 0.3453793108615144 0.0 0.0 0.0 0.0 33 0.3551188575886287 0.0 0.0 0.0 0.0 34 0.36513935277902515 0.0 0.0 0.0 0.0 35 0.379280425430893 0.0 0.0 0.0 0.0 36 0.3903310649866573 0.0 0.0 0.0 0.0 37 0.4022713746761484 0.0 0.0 0.0 0.0 38 0.41355613795131446 0.0 0.0 0.0 0.0 39 0.42437265378767697 0.0 0.0 0.0 0.0 40 0.43593836552612514 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAC 40 5.6152203E-9 46.000004 14 CGTATGT 20 6.3126755E-4 46.000004 19 GCGTTAG 20 6.3126755E-4 46.000004 26 CGTAATA 20 6.3126755E-4 46.000004 22 CGGTAAT 40 5.6152203E-9 46.000004 45 TATCGTG 20 6.3126755E-4 46.000004 21 TATCGAG 20 6.3126755E-4 46.000004 23 CTCGTAA 25 3.418149E-5 46.0 16 ATTCCGA 25 3.418149E-5 46.0 19 ATATCGT 75 0.0 46.0 35 CTCGATT 30 1.8621595E-6 46.0 42 ATACGTT 25 3.418149E-5 46.0 21 ATACGCT 25 3.418149E-5 46.0 43 CGATCTA 25 3.418149E-5 46.0 13 CGTTACA 35 1.02012564E-7 45.999996 34 GCGAATA 675 0.0 44.977776 1 CGAATAG 645 0.0 44.57364 2 AATGGGA 51365 0.0 43.814854 4 CGAATGG 223715 0.0 43.662117 2 GCGAATG 224245 0.0 43.65841 1 >>END_MODULE