##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527739_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2151580 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.094310692607294 33.0 31.0 34.0 31.0 34.0 2 32.53520854441852 34.0 31.0 34.0 31.0 34.0 3 32.83885842032367 34.0 31.0 34.0 31.0 34.0 4 35.681847758391505 37.0 35.0 37.0 35.0 37.0 5 36.082723393970944 37.0 35.0 37.0 35.0 37.0 6 35.984529508547205 37.0 35.0 37.0 35.0 37.0 7 36.34991634054973 37.0 36.0 37.0 35.0 37.0 8 36.56125637903308 37.0 37.0 37.0 35.0 37.0 9 38.657908141923606 39.0 39.0 39.0 38.0 39.0 10 38.03749058831185 39.0 38.0 39.0 37.0 39.0 11 37.65897015216724 39.0 38.0 39.0 35.0 39.0 12 37.098028890396826 39.0 37.0 39.0 34.0 39.0 13 36.801880013757334 39.0 37.0 39.0 33.0 39.0 14 37.717761830840594 40.0 37.0 40.0 33.0 40.0 15 37.818842432073176 40.0 37.0 40.0 33.0 40.0 16 37.91196701958561 40.0 37.0 40.0 34.0 40.0 17 37.82632576989933 40.0 37.0 40.0 33.0 40.0 18 37.81956422721907 40.0 37.0 40.0 33.0 40.0 19 37.784267840377765 40.0 37.0 40.0 33.0 40.0 20 37.7349942832709 40.0 37.0 40.0 33.0 40.0 21 37.777096831165935 40.0 37.0 40.0 33.0 40.0 22 37.654770447763966 40.0 37.0 40.0 33.0 40.0 23 37.62048587549614 40.0 37.0 40.0 33.0 40.0 24 37.57969631619554 40.0 36.0 40.0 33.0 40.0 25 37.53152799338161 40.0 36.0 40.0 33.0 40.0 26 37.3410837617007 40.0 36.0 40.0 33.0 40.0 27 37.24036800862622 40.0 36.0 40.0 33.0 40.0 28 37.10951579769286 39.0 35.0 40.0 32.0 40.0 29 36.996723802972696 39.0 35.0 40.0 32.0 40.0 30 36.84384731220777 39.0 35.0 40.0 31.0 40.0 31 36.74361446007121 39.0 35.0 40.0 31.0 40.0 32 36.66607562814304 39.0 35.0 40.0 31.0 40.0 33 36.363044367395126 39.0 35.0 40.0 31.0 40.0 34 36.17356314894171 38.0 35.0 40.0 30.0 40.0 35 36.127926454047724 38.0 35.0 40.0 30.0 40.0 36 35.97471671980591 38.0 35.0 40.0 30.0 40.0 37 35.9395495403378 38.0 35.0 40.0 30.0 40.0 38 35.557760343561476 38.0 34.0 40.0 29.0 40.0 39 35.62309140259716 38.0 34.0 40.0 29.0 40.0 40 35.389220015058704 38.0 34.0 40.0 28.0 40.0 41 35.041888286747415 37.0 34.0 40.0 27.0 40.0 42 35.11625410163693 37.0 34.0 40.0 28.0 40.0 43 35.05091002890899 37.0 34.0 40.0 28.0 40.0 44 34.8705811543145 37.0 33.0 40.0 27.0 40.0 45 34.725095975980445 36.0 33.0 40.0 27.0 40.0 46 34.346183269969046 36.0 33.0 39.0 26.0 40.0 47 34.05955576831909 35.0 33.0 39.0 25.0 40.0 48 33.93751754524582 35.0 33.0 39.0 25.0 40.0 49 33.81217756253544 35.0 32.0 39.0 26.0 40.0 50 33.64110746521161 35.0 32.0 39.0 25.0 40.0 51 34.07517638200764 35.0 33.0 39.0 26.0 40.0 52 33.82031530317255 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 6.0 15 16.0 16 49.0 17 146.0 18 345.0 19 653.0 20 1196.0 21 2214.0 22 3513.0 23 5302.0 24 7891.0 25 11048.0 26 15107.0 27 19856.0 28 26095.0 29 33617.0 30 43127.0 31 54924.0 32 73007.0 33 102361.0 34 175143.0 35 182089.0 36 259775.0 37 390493.0 38 594236.0 39 149371.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.71132841911525 0.2499093689288802 0.02235566420955763 0.016406547746307367 8 99.73321930860112 0.20459383336896608 0.0412719954637987 0.020914862566114203 9 99.16168583087777 0.4233632958105206 0.12953271549280063 0.28541815781890517 10 65.63204714674798 23.28753753055894 4.386404409782578 6.694010912910513 11 37.094367859898306 27.530744847972187 17.86733470286952 17.507552589259987 12 31.40269011610072 17.812258898112084 25.942051887450152 24.842999098337035 13 24.295401518883796 17.16315451900464 29.820689911599846 28.720754050511715 14 25.51473800648826 16.70102901123825 29.75181029754878 28.03242268472471 15 25.726768235436282 16.766329859916898 28.262067875700648 29.24483402894617 16 31.873321001310668 16.9940694745257 24.927588098048876 26.20502142611476 17 32.218183846289705 17.38048317980275 22.51647626395486 27.884856709952686 18 29.972067039106143 19.14444268862882 23.23762072523448 27.645869547030554 19 31.55755305403471 19.32277675010922 21.431366716552485 27.688303479303585 20 30.18683943892395 19.956450608390114 22.463120125675083 27.39358982701085 21 32.4278437241469 19.954173212244026 22.993335130462263 24.624647933146804 22 32.6837486870114 17.85906171278781 23.405357923014712 26.051831677186065 23 31.50275611411149 19.23070487734595 22.66557599531507 26.600963013227492 24 31.190055680011895 19.064269048792053 22.56867046542541 27.177004805770643 25 29.499298190167227 19.670056423651456 22.33061285195066 28.500032534230655 26 28.586573587782 18.321837905167364 23.44579332397587 29.645795183074764 27 28.52057557701782 16.875412487567274 24.982385037972097 29.62162689744281 28 31.890796530921463 20.137480363267922 20.91899906115506 27.05272404465556 29 32.17802731016277 20.57450803595497 20.87940025469655 26.368064399185716 30 30.87991150689261 19.384219968581228 23.16255960735831 26.57330891716785 31 32.32471021295978 19.862054862008385 20.745916954052372 27.067317970979467 32 33.986419282573735 20.750750611178763 20.381394138261186 24.881435967986317 33 35.406910270591844 19.174141793472703 20.877494678329413 24.541453257606037 34 30.532631833350376 21.99881017670735 24.509523234088437 22.95903475585384 35 30.004787179654024 22.86454605452737 24.074494092713262 23.056172673105348 36 31.058431478262488 23.424227776796585 21.197306165701484 24.320034579239444 37 31.190195112429002 24.06529155318417 19.690413556549142 25.054099777837678 38 32.349808048039115 22.90419133845825 20.678524619117113 24.06747599438552 39 32.86779947759321 21.64581377406371 19.643285399566828 25.843101348776248 40 29.72401676907203 21.77111703957092 21.058477955734855 27.446388235622194 41 28.770066648695376 21.863421299696036 22.236449492930777 27.13006255867781 42 27.799709980572416 19.321150038576302 22.6085946141905 30.270545366660777 43 26.410358899041636 18.67185974957938 25.795740804432093 29.12204054694689 44 27.424636778553435 18.098095353182313 24.39886037237751 30.078407495886744 45 29.387845211426022 18.80088121287612 23.1622807425241 28.648992833173757 46 28.55915187908421 21.165329664711514 22.879047025906544 27.396471430297737 47 27.58591360767436 20.658818170832596 23.24645144498462 28.50881677650843 48 28.9519794755482 20.641993325834967 25.11061638423856 25.295410814378272 49 29.537316762565187 19.74307253274338 24.02573922419803 26.693871480493403 50 26.45056191264094 20.511902880673738 24.914620883257886 28.122914323427434 51 27.125833108692216 20.280119725968824 24.065942237797337 28.52810492754162 52 27.619005568001192 20.695210031697638 23.459132358545812 28.22665204175536 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 13.0 6 26.0 7 27.5 8 29.0 9 21.5 10 14.0 11 303.5 12 593.0 13 1273.0 14 3488.0 15 5023.0 16 4273.0 17 3523.0 18 2963.0 19 2403.0 20 2738.0 21 3073.0 22 3243.5 23 3414.0 24 4445.0 25 5476.0 26 5439.0 27 5402.0 28 5839.5 29 6277.0 30 7476.0 31 8675.0 32 10368.5 33 12062.0 34 13134.0 35 14206.0 36 18539.0 37 22872.0 38 24318.5 39 26739.5 40 27714.0 41 32186.5 42 36659.0 43 36728.5 44 36798.0 45 41455.0 46 46112.0 47 50900.0 48 55688.0 49 60856.5 50 66025.0 51 70975.5 52 75926.0 53 87800.5 54 99675.0 55 108057.5 56 116440.0 57 141834.5 58 167229.0 59 197116.5 60 227004.0 61 222091.5 62 217179.0 63 225913.0 64 206947.5 65 179248.0 66 161307.5 67 143367.0 68 117813.5 69 92260.0 70 80980.0 71 69700.0 72 59504.0 73 49308.0 74 50256.0 75 51204.0 76 38163.0 77 25122.0 78 16689.5 79 8257.0 80 6028.0 81 3799.0 82 2475.5 83 1152.0 84 673.0 85 194.0 86 125.0 87 56.0 88 36.0 89 14.5 90 13.0 91 7.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2151580.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.17352754722701 #Duplication Level Percentage of deduplicated Percentage of total 1 68.01690588435677 5.5593805392293705 2 10.090311741331705 1.6494688195576566 3 4.354930786440911 1.0678544024772532 4 2.176568259428896 0.7116096250744812 5 1.2903462555638656 0.527334033265624 6 0.7436290341850527 0.3646843437497606 7 0.5053929350511254 0.2891590153769999 8 0.3782372516372775 0.24732260765157782 9 0.29634453224353047 0.21799621779863398 >10 5.238195555264428 12.19880113301486 >50 4.284284427019815 25.20015593382877 >100 2.487361019799359 35.72264414784471 >500 0.08928072576451396 4.923788713183297 >1k 0.04225954352853661 6.336756990880121 >5k 0.004166433869010652 2.4512888241395787 >10k+ 0.0017856145152902792 2.531754652927299 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCGAATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 23911 1.1113228418185706 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 16762 0.7790553918515696 No Hit GCGAATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 11368 0.5283559058924139 No Hit GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 8526 0.3962669294193105 No Hit GCGAATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 8057 0.3744689948781825 No Hit GCGAATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7489 0.34806979057250953 No Hit GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 7035 0.32696901811691875 No Hit GCGAATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6982 0.3245057120813542 No Hit GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6357 0.29545729185063996 No Hit GCGAATGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5941 0.2761226633450767 No Hit GCGAATGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 4935 0.2293663261417191 No Hit GCGAATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 4823 0.22416084923637514 No Hit GCGAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4495 0.20891623829929631 No Hit GCGAATGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 4183 0.1944152669201238 No Hit GCGAATGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 4032 0.18739716859238328 No Hit GCGAATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3746 0.17410461149480846 No Hit GCGAATGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 3441 0.15992898242221995 No Hit GCGAATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3113 0.14468437148514116 No Hit GCGAATGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 3063 0.14236049786668403 No Hit GCGAATGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 3035 0.14105912864034803 No Hit GCGAATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 2674 0.12428076111508753 No Hit GCGAATGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2314 0.10754887106219616 No Hit GCGAATGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGAGA 2173 0.10099554745814704 No Hit GCGAATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2165 0.10062372767919389 No Hit GCGAATGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 2161 0.10043781778971733 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.04880134598759981 0.0 0.0 0.0 0.0 8 0.058375705295643204 0.0 0.0 0.0 0.0 9 0.07478225304195056 0.0 0.0 0.0 0.0 10 0.09783507933704533 0.0 0.0 0.0 0.0 11 0.12572156275853094 0.0 0.0 0.0 0.0 12 0.13715502096134005 0.0 0.0 0.0 0.0 13 0.14631108301806114 0.0 0.0 0.0 0.0 14 0.15346861376290913 0.0 0.0 0.0 0.0 15 0.16109091923144853 0.0 0.0 0.0 0.0 16 0.17103709831844505 0.0 0.0 0.0 0.0 17 0.18168043949097873 0.0 0.0 0.0 0.0 18 0.19162661857797525 0.0 0.0 0.0 0.0 19 0.2036642839215832 0.0 0.0 0.0 0.0 20 0.21351750806384145 0.0 0.0 0.0 0.0 21 0.22355664209557627 0.0 0.0 0.0 0.0 22 0.23224792942860595 0.0 0.0 0.0 0.0 23 0.2426588832392939 0.0 0.0 0.0 0.0 24 0.2521867650749682 0.0 0.0 0.0 0.0 25 0.26217942163433383 0.0 0.0 0.0 0.0 26 0.2734734474200355 0.0 0.0 0.0 0.0 27 0.28276894189386403 0.0 0.0 0.0 0.0 28 0.2961544539361771 0.0 0.0 0.0 0.0 29 0.30400914676656227 0.0 0.0 0.0 0.0 30 0.31381589343645133 0.0 0.0 0.0 0.0 31 0.32436627966424675 0.0 0.0 0.0 0.0 32 0.33798417906840555 0.0 0.0 0.0 0.0 33 0.3474191059593415 0.0 0.0 0.0 0.0 34 0.3579694921871369 0.0 0.0 0.0 0.0 35 0.37195921137024884 0.0 0.0 0.0 0.0 36 0.3844151739651791 0.0 0.0 0.0 0.0 37 0.3955697673337733 0.0 0.0 0.0 0.0 38 0.406863793119475 0.0 0.0 0.0 0.0 39 0.41680997220647154 0.0 0.0 0.0 0.0 40 0.42694206118294464 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTT 35 1.02012564E-7 46.000004 14 ACGTAAG 35 1.02012564E-7 46.000004 38 CTCGTAA 25 3.4181572E-5 46.0 16 CTAACGT 20 6.312688E-4 46.0 39 ACAATCG 20 6.312688E-4 46.0 42 ATACGTA 20 6.312688E-4 46.0 34 ATACCGA 25 3.4181572E-5 46.0 27 ATTTCGT 20 6.312688E-4 46.0 12 TAATCGA 30 1.8621649E-6 46.0 31 AATGGGA 52165 0.0 43.672 4 CGAATGG 225325 0.0 43.66657 2 GCGAATG 226080 0.0 43.639774 1 GAATGGG 223895 0.0 43.602356 3 AATGGGG 147540 0.0 43.430935 4 ATGGGAT 14180 0.0 43.372353 5 ATGGGGA 44080 0.0 43.349365 5 AATGGGT 9720 0.0 43.23148 4 ATGGGGG 56595 0.0 43.16742 5 ATGGGAG 20160 0.0 43.15923 5 ATGGGAC 8865 0.0 43.120132 5 >>END_MODULE