##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527735_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 760928 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13895007149165 33.0 31.0 34.0 30.0 34.0 2 32.06970173262122 33.0 31.0 34.0 30.0 34.0 3 32.82640013246983 34.0 31.0 34.0 31.0 34.0 4 36.25602685142353 37.0 37.0 37.0 35.0 37.0 5 35.308782171243536 35.0 35.0 37.0 33.0 37.0 6 36.05128868960007 37.0 35.0 37.0 35.0 37.0 7 36.43306199798141 37.0 37.0 37.0 35.0 37.0 8 36.64266395769376 37.0 37.0 37.0 35.0 37.0 9 38.6857166512469 39.0 39.0 39.0 39.0 39.0 10 38.06298624837041 39.0 39.0 39.0 37.0 39.0 11 37.77776083939611 39.0 38.0 39.0 35.0 39.0 12 37.45221098448211 39.0 37.0 39.0 35.0 39.0 13 37.253440535766856 39.0 37.0 39.0 34.0 39.0 14 38.039645012405906 40.0 38.0 40.0 34.0 40.0 15 38.156029216956135 40.0 38.0 40.0 34.0 40.0 16 38.215730003364314 40.0 38.0 40.0 35.0 40.0 17 38.24131323857185 40.0 38.0 40.0 35.0 40.0 18 38.15823704739476 40.0 38.0 40.0 35.0 40.0 19 38.14892736237857 40.0 38.0 40.0 34.0 40.0 20 38.0949682492956 40.0 38.0 40.0 34.0 40.0 21 38.10646736616342 40.0 38.0 40.0 34.0 40.0 22 38.1439912843265 40.0 38.0 40.0 34.0 40.0 23 38.03660661718323 40.0 38.0 40.0 34.0 40.0 24 37.889835832036674 40.0 38.0 40.0 34.0 40.0 25 37.57335910887758 39.0 37.0 40.0 34.0 40.0 26 37.18392935993944 39.0 35.0 40.0 33.0 40.0 27 36.957994711720424 39.0 35.0 40.0 33.0 40.0 28 36.796102916438876 39.0 35.0 40.0 33.0 40.0 29 36.76031109382228 39.0 35.0 40.0 32.0 40.0 30 36.7444580827621 40.0 35.0 40.0 32.0 40.0 31 36.65185799444888 40.0 35.0 40.0 32.0 40.0 32 36.51927646242483 40.0 35.0 40.0 31.0 40.0 33 36.324522162412215 40.0 35.0 40.0 31.0 40.0 34 35.88925496236175 40.0 35.0 40.0 28.0 40.0 35 35.70296006980949 40.0 35.0 40.0 26.0 40.0 36 35.38096245636906 39.0 35.0 40.0 24.0 40.0 37 34.961766422053074 39.0 35.0 40.0 21.0 40.0 38 34.625479677446485 39.0 35.0 40.0 18.0 40.0 39 34.238843885361035 39.0 35.0 40.0 15.0 40.0 40 33.828673672147694 39.0 34.0 40.0 11.0 40.0 41 33.54889161655242 39.0 34.0 40.0 10.0 40.0 42 33.311620810378905 38.0 33.0 40.0 10.0 40.0 43 33.08201564405568 38.0 33.0 40.0 10.0 40.0 44 32.74773171706127 37.0 33.0 40.0 10.0 40.0 45 32.59969142941251 37.0 33.0 40.0 10.0 40.0 46 32.41162238740065 36.0 33.0 40.0 9.0 40.0 47 32.28128942554355 36.0 32.0 40.0 9.0 40.0 48 32.097070944951426 35.0 32.0 40.0 9.0 40.0 49 31.932414104882458 35.0 31.0 40.0 9.0 40.0 50 31.35477469616048 35.0 30.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 6.0 14 16.0 15 19.0 16 58.0 17 183.0 18 410.0 19 764.0 20 1383.0 21 1986.0 22 3064.0 23 4475.0 24 6303.0 25 8963.0 26 11835.0 27 16135.0 28 20954.0 29 24206.0 30 22194.0 31 18277.0 32 17592.0 33 20351.0 34 33467.0 35 43314.0 36 65532.0 37 113566.0 38 219916.0 39 105955.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.38207031414274 0.3949125278607174 0.18700849489044954 0.036008663106102026 8 98.53994070398251 1.15792821397031 0.19357941881492075 0.10855166323226376 9 96.62714474956896 1.9145043946339206 0.7786544850498339 0.679696370747298 10 53.641080365027975 31.190204592287312 6.119895706295471 9.04881933638925 11 30.307860927709324 35.81035262206148 17.7609445308886 16.120841919340595 12 31.437402750325916 28.638714832415157 22.287785440935277 17.63609697632365 13 22.53642920223727 31.39600592960175 24.369191303250766 21.698373564910213 14 23.534946801799908 34.11860254846714 23.288011480718282 19.058439169014676 15 22.983383447579797 32.85409394844191 23.09167227385508 21.070850330123218 16 25.026415114176377 34.06774359729173 21.825718070566467 19.08012321796543 17 25.629625930442828 33.65942638462509 19.98073405105345 20.730213633878634 18 24.260508221540015 34.89725703351697 21.189915471634635 19.65231927330838 19 25.444588712729722 32.249043273476595 21.843722402119518 20.462645611674166 20 23.219279616468313 33.47031519407881 22.209197190798605 21.101207998654274 21 24.094001009293915 32.33328251818832 24.192302031204004 19.380414441313764 22 23.455438622313807 33.289351949198874 22.77745069178687 20.477758736700448 23 23.31311241010976 34.490911098027674 22.356648723663735 19.83932776819883 24 22.712135707977627 33.41196538962951 25.012221918499517 18.863676983893352 25 25.204355734051052 34.55491189705202 19.95957567601665 20.281156692880273 26 24.863324782371 33.229162286050716 22.4950323815131 19.412480550065183 27 25.09580407081879 33.08736174776063 21.45827200471004 20.358562176710542 28 27.47342718364944 33.322863661213674 20.237394339543293 18.96631481559359 29 28.405972707010385 32.81466840489507 19.9763972412633 18.802961646831235 30 27.558717776189074 32.68416985575508 20.319793725556163 19.437318642499683 31 27.99818116825771 33.713702216241224 18.75289120652677 19.535225408974306 32 27.651104966567143 34.0606469994533 20.301657975524623 17.98659005845494 33 27.905399722444173 35.043131544640225 18.692570124900122 18.358898608015476 34 24.950849489044955 35.954650111442874 20.298109676605407 18.796390722906768 35 26.105623659531517 37.53587724462761 19.26253206610875 17.09596702973212 36 26.61605302998444 36.3829429328399 18.68652487488961 18.31447916228605 37 25.715836452331892 35.76935005677278 18.905599478531478 19.60921401236385 38 26.42037091551369 34.70578031035788 19.901882963959796 18.971965810168637 39 26.585038269060934 33.83789267841373 18.63750578241305 20.939563270112284 40 25.689552756634004 34.043694015728164 20.04079229572312 20.225960931914717 41 25.716230707767355 33.46032738971361 20.490900584549394 20.33254131796964 42 24.932056646620968 32.54854598595399 20.926027166827872 21.593370200597164 43 25.700986164262584 32.03956221876446 21.98880840237184 20.27064321460112 44 26.550738046175198 32.19884141469363 20.6834286555364 20.566991883594767 45 25.855534294966148 32.73016632322638 21.05823415618823 20.356065225619243 46 25.709265528407414 33.75891017284158 20.253427393919004 20.278396904831993 47 25.210795239497035 33.75391627065898 20.949813911434457 20.08547457840952 48 25.292406114638965 33.38384183523277 20.80604209596703 20.517709954161234 49 24.821533706211362 33.94683859708146 20.328335926657974 20.903291770049204 50 23.70487089448673 34.064458135329495 20.733761932797847 21.49690903738593 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 19.5 2 39.0 3 55.0 4 71.0 5 116.5 6 162.0 7 2318.5 8 4475.0 9 4379.0 10 4283.0 11 4249.0 12 4215.0 13 4136.5 14 4058.0 15 4593.5 16 5129.0 17 5347.0 18 5565.0 19 6830.5 20 8096.0 21 9356.5 22 10617.0 23 12880.0 24 15143.0 25 17367.0 26 19591.0 27 22203.0 28 24815.0 29 27294.0 30 29773.0 31 29344.0 32 28915.0 33 28110.0 34 27305.0 35 28474.0 36 29643.0 37 28284.0 38 26925.0 39 26782.0 40 26639.0 41 26046.0 42 25453.0 43 27838.5 44 30224.0 45 34535.5 46 38847.0 47 40450.5 48 42054.0 49 43395.0 50 44736.0 51 44846.5 52 44957.0 53 44373.5 54 43790.0 55 43123.5 56 42457.0 57 41661.5 58 40866.0 59 39344.5 60 37823.0 61 33419.5 62 29016.0 63 25815.0 64 22614.0 65 18185.5 66 13757.0 67 12522.0 68 11287.0 69 9315.5 70 7344.0 71 6840.0 72 6336.0 73 4395.5 74 2455.0 75 1628.5 76 802.0 77 535.0 78 268.0 79 252.0 80 236.0 81 152.5 82 69.0 83 67.5 84 66.0 85 37.5 86 9.0 87 5.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 760928.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.780772107295633 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88631757973836 19.3008308621995 2 8.88769247378977 4.404877635054217 3 3.3295172651809173 2.475240257272636 4 1.7100998862421217 1.6951038224671282 5 1.0618976802820344 1.3157322208167486 6 0.7127784406302841 1.059792006015157 7 0.4974502285718035 0.8629040524271989 8 0.40511528841971256 0.8031255711608192 9 0.2923022380289812 0.65191276323438 >10 3.6296064014977083 22.679419211717768 >50 1.1171335713633803 19.085307536274847 >100 0.43889311229297745 17.8998648392643 >500 0.020438649837172973 3.391053867477027 >1k 0.010757184124827878 4.374835354618288 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATGTAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3224 0.4236931746499012 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAA 2690 0.35351570713654906 No Hit TATGTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2232 0.2933260439883931 No Hit TATGTAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTA 2041 0.26822511459691323 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAA 1856 0.2439126960763699 No Hit TATGTAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATGTAGGGA 1816 0.23865595693679298 No Hit TATGTAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCA 1801 0.23668467975945162 No Hit TATGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1732 0.2276168047436814 No Hit TATGTAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1547 0.20330438622313804 No Hit TATGTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1477 0.19410509272887844 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAAAA 1387 0.1822774296648303 No Hit TATGTAGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAA 1352 0.17767778291770048 No Hit TATGTAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 1346 0.17688927204676394 Illumina Single End Adapter 2 (100% over 34bp) TATGTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1344 0.1766264350897851 No Hit TATGTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1263 0.1659815383321418 No Hit TATGTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1253 0.16466735354724757 No Hit TATGTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1153 0.15152550569830522 No Hit TATGTAGGGGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAA 1118 0.1469258589511754 No Hit TATGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1103 0.14495458177383405 No Hit TATGTAGGGAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAA 1088 0.14298330459649272 No Hit TATGTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 959 0.1260303208713571 No Hit TATGTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 954 0.12537322847890997 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAA 875 0.1149911686782455 No Hit TATGTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 869 0.11420265780730898 No Hit TATGTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 847 0.11131145128054165 No Hit TATGTAGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 841 0.11052294040960513 Illumina Single End Adapter 2 (97% over 34bp) TATGTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 822 0.10802598931830606 No Hit TATGTAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 811 0.1065803860549224 Illumina Single End Adapter 2 (100% over 34bp) TATGTAGGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 795 0.10447769039909163 No Hit TATGTAGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 766 0.10066655452289835 Illumina Single End Adapter 2 (100% over 34bp) TATGTAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 763 0.1002722990874301 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.1877970057613861 0.0 0.0 0.0 0.0 7 0.19607636990621977 0.0 0.0 0.0 0.0 8 0.2719048319946171 0.0 0.0 0.0 0.0 9 0.3970152235165482 0.0 0.0 0.0 0.0 10 0.6199009630346104 0.0 0.0 0.0 0.0 11 0.8710416754278986 0.0 0.0 0.0 0.0 12 1.0098195887127297 0.0 0.0 0.0 0.0 13 1.1190283443374407 0.0 0.0 0.0 0.0 14 1.2495268934774382 0.0 0.0 0.0 0.0 15 1.4063091383153203 0.0 0.0 0.0 0.0 16 1.5349678287564659 0.0 0.0 0.0 0.0 17 1.6491704865637749 0.0 0.0 0.0 0.0 18 1.7539110139198453 0.0 0.0 0.0 0.0 19 1.8633826065015349 0.0 0.0 0.0 0.0 20 1.9827105849699314 0.0 0.0 0.0 0.0 21 2.1007243786534335 0.0 0.0 0.0 0.0 22 2.2427877539005006 0.0 0.0 0.0 0.0 23 2.3973358846040624 0.0 0.0 0.0 0.0 24 2.556352243576265 0.0 0.0 0.0 0.0 25 2.7130030699356573 0.0 0.0 0.0 0.0 26 2.876750494133479 0.0 0.0 0.0 0.0 27 3.0341898313638085 0.0 0.0 0.0 0.0 28 3.197674418604651 0.0 0.0 0.0 0.0 29 3.3188422557718997 0.0 0.0 0.0 0.0 30 3.4367246309769124 0.0 0.0 0.0 0.0 31 3.5360770007149167 0.0 0.0 0.0 0.0 32 3.6322753269691743 0.0 0.0 0.0 0.0 33 3.7209827999495353 0.0 0.0 0.0 0.0 34 3.8032507674839144 0.0 0.0 0.0 0.0 35 3.9090426426679 0.0 0.0 0.0 0.0 36 3.9886822406324907 0.0 0.0 0.0 0.0 37 4.068978930989529 0.0 0.0 0.0 0.0 38 4.153086757222759 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTC 55 1.8189894E-12 44.000004 11 CACGGCA 30 2.5265836E-6 44.000004 34 ATTACCA 30 2.5265836E-6 44.000004 23 CATTAGC 30 2.5265836E-6 44.000004 17 GACATAT 30 2.5265836E-6 44.000004 9 TAATACT 25 4.4414177E-5 44.0 24 GTACACC 20 7.854803E-4 44.0 31 CATGCGA 20 7.854803E-4 44.0 26 ACCGCGT 25 4.4414177E-5 44.0 25 CGGTTAT 20 7.854803E-4 44.0 40 CAACCGC 25 4.4414177E-5 44.0 26 TTACTAC 20 7.854803E-4 44.0 42 CAATTGG 20 7.854803E-4 44.0 38 CGATTGG 25 4.4414177E-5 44.0 30 CACGAAC 20 7.854803E-4 44.0 30 CGTTCTA 20 7.854803E-4 44.0 40 TACGGAT 20 7.854803E-4 44.0 13 CGTTACA 25 4.4414177E-5 44.0 42 AACGGTC 25 4.4414177E-5 44.0 41 CTAGTAT 20 7.854803E-4 44.0 32 >>END_MODULE