##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527734_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1124555 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83980952465642 31.0 31.0 34.0 30.0 34.0 2 31.72583110652658 31.0 31.0 34.0 30.0 34.0 3 32.5306418983509 34.0 31.0 34.0 30.0 34.0 4 36.15340379083282 37.0 35.0 37.0 35.0 37.0 5 35.08775293338254 35.0 35.0 37.0 33.0 37.0 6 35.83205623557763 37.0 35.0 37.0 35.0 37.0 7 36.356878053985795 37.0 35.0 37.0 35.0 37.0 8 36.583570390065404 37.0 37.0 37.0 35.0 37.0 9 38.623597778676896 39.0 39.0 39.0 37.0 39.0 10 37.87220633939647 39.0 38.0 39.0 35.0 39.0 11 37.48755107575886 39.0 37.0 39.0 35.0 39.0 12 37.16872096073558 39.0 37.0 39.0 34.0 39.0 13 36.97649203462703 39.0 37.0 39.0 33.0 39.0 14 37.80145924387869 40.0 38.0 40.0 33.0 40.0 15 37.93320291137383 40.0 38.0 40.0 33.0 40.0 16 37.9898724384312 40.0 38.0 40.0 34.0 40.0 17 38.01202431183891 40.0 38.0 40.0 34.0 40.0 18 37.987033093090155 40.0 38.0 40.0 34.0 40.0 19 37.96861780882216 40.0 38.0 40.0 34.0 40.0 20 37.98322625394045 40.0 38.0 40.0 34.0 40.0 21 37.96886501771812 40.0 38.0 40.0 34.0 40.0 22 37.978289189946246 40.0 38.0 40.0 34.0 40.0 23 37.87826295734757 40.0 38.0 40.0 34.0 40.0 24 37.72005104241233 40.0 37.0 40.0 33.0 40.0 25 37.433206023716046 39.0 37.0 40.0 33.0 40.0 26 37.008307285993126 39.0 35.0 40.0 33.0 40.0 27 36.81509574898515 39.0 35.0 40.0 32.0 40.0 28 36.6727007571884 39.0 35.0 40.0 32.0 40.0 29 36.55741337684684 39.0 35.0 40.0 31.0 40.0 30 36.33340476899752 39.0 35.0 40.0 31.0 40.0 31 36.15111043924041 39.0 35.0 40.0 30.0 40.0 32 35.900560666219086 38.0 35.0 40.0 30.0 40.0 33 35.68112631218571 38.0 35.0 40.0 29.0 40.0 34 35.43471684355145 38.0 35.0 40.0 26.0 40.0 35 35.205757833098424 38.0 35.0 40.0 25.0 40.0 36 34.92713562253513 38.0 35.0 40.0 23.0 40.0 37 34.51521713033156 38.0 34.0 40.0 21.0 40.0 38 34.19290652747087 38.0 34.0 40.0 18.0 40.0 39 33.821243069480815 38.0 33.0 40.0 15.0 40.0 40 33.404118962611875 38.0 33.0 40.0 12.0 40.0 41 33.13639439600553 38.0 33.0 40.0 10.0 40.0 42 32.874626852399395 37.0 33.0 40.0 10.0 40.0 43 32.628388117966665 37.0 32.0 40.0 10.0 40.0 44 32.424935196588876 36.0 32.0 40.0 10.0 40.0 45 32.21437457483182 36.0 31.0 40.0 10.0 40.0 46 32.04106246470826 35.0 31.0 40.0 10.0 40.0 47 31.838780673244084 35.0 31.0 40.0 9.0 40.0 48 31.59073944804834 35.0 30.0 39.0 9.0 40.0 49 31.713077617368647 35.0 31.0 39.0 9.0 40.0 50 31.65139988706644 35.0 31.0 40.0 9.0 40.0 51 31.52798662582088 35.0 31.0 40.0 9.0 40.0 52 30.997146426808825 35.0 29.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 1.0 14 9.0 15 36.0 16 119.0 17 315.0 18 663.0 19 1226.0 20 2226.0 21 3616.0 22 5800.0 23 8905.0 24 12785.0 25 17221.0 26 23042.0 27 29193.0 28 34149.0 29 32256.0 30 27763.0 31 26612.0 32 31488.0 33 39601.0 34 60572.0 35 75758.0 36 114276.0 37 180364.0 38 285377.0 39 111177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.44013409748746 0.3845965737558412 0.1448572991094255 0.030412029647282703 8 98.57454726536274 1.127646046658456 0.18914148263090733 0.10866520534789316 9 96.6777080711926 1.9060872967529379 0.73300105375015 0.6832035783043071 10 53.41499526479363 31.328747815802693 6.200674933640418 9.055581985763258 11 30.176203031421316 35.35193921151033 18.022773452610146 16.449084304458207 12 31.51975670376282 27.897879605710703 22.70249120763324 17.879872482893234 13 22.664253860415897 30.462894211488102 24.742587067773474 22.130264860322526 14 23.736500215640856 33.328472151206476 23.489558091867448 19.44546954128522 15 23.2344349542708 31.994433353637664 23.355816300670043 21.415315391421498 16 25.328507720831794 32.95917051633757 22.310780708813706 19.40154105401692 17 25.949286606702206 32.577508436670506 20.323150046018203 21.150054910609086 18 24.71084117717675 34.02323585773928 21.39352899591394 19.872393969170027 19 25.617866622797465 31.206388304707193 22.20407183285833 20.971673239637013 20 23.488402079044597 32.6492701557505 22.52197535914206 21.34035240606284 21 24.499290830595214 31.311941167839723 24.56696204276358 19.62180595880148 22 23.720760656437434 32.504146084451186 22.781544699903517 20.993548559207863 23 23.72431761896928 33.61098390029834 22.565903846410357 20.09879463432202 24 22.96872985314191 32.66785528497939 25.13349725002334 19.229917611855356 25 25.36692291617573 33.66549435109888 20.1916313564032 20.77595137632219 26 25.32886341708498 32.30691251206033 22.579331379968075 19.78489269088662 27 25.384440956645072 32.249912187487496 21.538830915339847 20.826815940527588 28 27.74350743182859 32.52602140402204 20.392599739452493 19.337871424696882 29 28.63025819101778 31.963132083357415 20.1846952794661 19.221914446158703 30 27.640711214658243 32.06957418712291 20.561377611588583 19.728336986630268 31 28.315111310696228 32.845169867191906 19.00449511139962 19.83522371071224 32 27.68108273939469 33.23892561946726 20.801828278741368 18.278163362396683 33 28.06096633779584 34.344073878111786 18.935134342028626 18.65982544206375 34 24.83320068827225 35.301163571368235 20.595346603767712 19.270289136591806 35 26.19302746419695 36.96635558065191 19.4920657504524 17.348551204698747 36 26.93154180987146 35.70612375561889 18.876533384316463 18.48580105019319 37 25.885883749572052 35.11415626625643 19.231785017184574 19.768174966986944 38 26.297068618253444 34.348609005339895 20.154105401692224 19.200216974714444 39 26.5727332144715 33.288723094913095 18.789654574476124 21.348889116139272 40 25.61982295218998 33.7065772683417 20.254589593216874 20.41901018625145 41 25.750096704918835 33.01216925806208 20.7296219393449 20.508112097674193 42 24.8597000591345 32.20900711837127 21.089053003187928 21.842239819306304 43 25.69487486161193 31.56893171076559 22.27725633695106 20.458937090671423 44 26.65872278367888 31.600232981045835 20.890129873594443 20.850914361680843 45 26.067022066506308 32.081312163477996 21.348355571759495 20.5033101982562 46 25.72991094255061 33.3140664529525 20.478500384596572 20.477522219900315 47 25.465184006117976 33.194107891566 21.113596044657665 20.22711205765836 48 25.62435807941808 32.8431246137361 20.825482079578144 20.707035227267674 49 24.956271591874117 33.56696648896675 20.47716652364713 20.999595395512003 50 23.53828847855374 33.98971148587663 20.622290594946445 21.84970944062318 51 22.923823201177353 33.575769971233065 20.835797270920498 22.66460955666908 52 23.98646575756633 32.474356523246975 22.036538897608388 21.502638821578312 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 21.5 2 43.0 3 78.0 4 113.0 5 157.5 6 202.0 7 3132.0 8 6062.0 9 5766.5 10 5471.0 11 5526.0 12 5581.0 13 5394.0 14 5368.0 15 5529.0 16 5810.0 17 6091.0 18 7116.5 19 8142.0 20 9430.5 21 10719.0 22 13109.0 23 15499.0 24 19349.0 25 23199.0 26 27168.5 27 31138.0 28 36116.5 29 41095.0 30 40841.5 31 40588.0 32 41263.0 33 41938.0 34 42089.5 35 42241.0 36 41362.5 37 40484.0 38 39163.5 39 37733.0 40 37623.0 41 38965.5 42 40308.0 43 42840.0 44 45372.0 45 47457.5 46 49543.0 47 54300.0 48 59057.0 49 62140.0 50 65223.0 51 63026.0 52 60829.0 53 61919.0 54 63009.0 55 65202.5 56 67396.0 57 61916.0 58 56436.0 59 58134.5 60 59833.0 61 51167.5 62 42502.0 63 39176.0 64 30015.0 65 24180.0 66 21301.5 67 18423.0 68 15868.0 69 13313.0 70 11940.5 71 10568.0 72 7595.0 73 4622.0 74 3246.0 75 1870.0 76 1412.5 77 955.0 78 631.0 79 307.0 80 178.5 81 50.0 82 72.0 83 94.0 84 49.5 85 5.0 86 3.5 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1124555.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.241192788041626 #Duplication Level Percentage of deduplicated Percentage of total 1 79.90408623747986 19.369703590350532 2 8.1268411748583 3.9400864735506946 3 3.228955390156275 2.3482119035029325 4 1.6964367376952 1.6449460004474301 5 1.003394633248832 1.216174137353563 6 0.6655268659227596 0.9679899037472847 7 0.4975280164920149 0.8442470795664421 8 0.3428164272896868 0.6648223283869561 9 0.27447494542585193 0.5988240060799753 >10 2.484025573817522 13.999134038365677 >50 1.0820429575800472 18.62828434089071 >100 0.6605153798946426 26.88176364888861 >500 0.022359288664580017 3.7237375873787304 >1k 0.010996371474383615 5.172074961490434 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATGTAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4334 0.38539689032550656 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAA 3534 0.31425763968858794 No Hit TATGTAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATT 3175 0.2823339009652707 No Hit TATGTAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAG 2902 0.25805763168542223 No Hit TATGTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2794 0.24845383284943823 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAA 2555 0.2272009817216588 No Hit TATGTAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATGTAGGGAAG 2495 0.22186553792388988 No Hit TATGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2361 0.20994971344220603 No Hit TATGTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2215 0.1969668002009684 No Hit TATGTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2059 0.18309464632676925 No Hit TATGTAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2042 0.18158293725073474 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAAAAAA 1883 0.16744401118664717 No Hit TATGTAGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAAA 1869 0.1661990743005011 No Hit TATGTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1833 0.16299780802183975 No Hit TATGTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1806 0.16059685831284373 No Hit TATGTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1794 0.15952976955328996 No Hit TATGTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1519 0.1350756521468492 No Hit TATGTAGGGGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAAAA 1502 0.13356394307081468 No Hit TATGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 1487 0.13223008212137247 No Hit TATGTAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 1479 0.13151868961500326 Illumina Single End Adapter 2 (100% over 34bp) TATGTAGGGAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAA 1477 0.13134084148841096 No Hit TATGTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 1475 0.1311629933618187 No Hit TATGTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1365 0.12138134639924236 No Hit TATGTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1353 0.12031425763968859 No Hit TATGTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1298 0.11542343415840044 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAAAA 1271 0.11302248444940444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.16175287113569367 0.0 0.0 0.0 0.0 7 0.16904464432597782 0.0 0.0 0.0 0.0 8 0.2340481345954622 0.0 0.0 0.0 0.0 9 0.34804878374112425 0.0 0.0 0.0 0.0 10 0.5473276095877925 0.0 0.0 0.0 0.0 11 0.7835099217023622 0.0 0.0 0.0 0.0 12 0.9114716487855196 0.0 0.0 0.0 0.0 13 1.0123115365633517 0.0 0.0 0.0 0.0 14 1.1373387695577362 0.0 0.0 0.0 0.0 15 1.2845080943128615 0.0 0.0 0.0 0.0 16 1.402954946623331 0.0 0.0 0.0 0.0 17 1.5086856578824512 0.0 0.0 0.0 0.0 18 1.6091698494070987 0.0 0.0 0.0 0.0 19 1.7106322056280039 0.0 0.0 0.0 0.0 20 1.824010386330593 0.0 0.0 0.0 0.0 21 1.9328534398050785 0.0 0.0 0.0 0.0 22 2.0576139006095744 0.0 0.0 0.0 0.0 23 2.197758224364304 0.0 0.0 0.0 0.0 24 2.3331006487010417 0.0 0.0 0.0 0.0 25 2.4691544655441486 0.0 0.0 0.0 0.0 26 2.6040522695644053 0.0 0.0 0.0 0.0 27 2.730324439444936 0.0 0.0 0.0 0.0 28 2.8572190777685393 0.0 0.0 0.0 0.0 29 2.9465877613811684 0.0 0.0 0.0 0.0 30 3.0372013818799437 0.0 0.0 0.0 0.0 31 3.115988101960331 0.0 0.0 0.0 0.0 32 3.2002881139650796 0.0 0.0 0.0 0.0 33 3.2777409730960247 0.0 0.0 0.0 0.0 34 3.3561719969232273 0.0 0.0 0.0 0.0 35 3.4594128344100556 0.0 0.0 0.0 0.0 36 3.528062211274682 0.0 0.0 0.0 0.0 37 3.595377727189866 0.0 0.0 0.0 0.0 38 3.669095775662373 0.0 0.0 0.0 0.0 39 3.746192938540134 0.0 0.0 0.0 0.0 40 3.8298704821018092 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 6.3113944E-4 46.000004 30 AGCGTAA 20 6.3113944E-4 46.000004 37 CTCGTCA 20 6.3113944E-4 46.000004 22 CAACGTC 20 6.3113944E-4 46.000004 29 TTTCGAA 40 5.6115823E-9 46.000004 15 CTATACA 20 6.3113944E-4 46.000004 16 GATTTCG 20 6.3113944E-4 46.000004 10 CGCGATT 20 6.3113944E-4 46.000004 28 GCGCATA 20 6.3113944E-4 46.000004 13 TCGATAG 20 6.3113944E-4 46.000004 23 GCACCGT 20 6.3113944E-4 46.000004 42 CTAACTG 20 6.3113944E-4 46.000004 46 CTAACGA 20 6.3113944E-4 46.000004 28 CTACGAA 20 6.3113944E-4 46.000004 20 ACGGACT 20 6.3113944E-4 46.000004 34 TCCGTTA 20 6.3113944E-4 46.000004 22 TCGTACG 20 6.3113944E-4 46.000004 25 ATGAATC 20 6.3113944E-4 46.000004 43 CTCGATA 35 1.01954356E-7 46.000004 24 TTAGTCT 35 1.01954356E-7 46.000004 29 >>END_MODULE