##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527733_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1135558 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.777179148929424 31.0 31.0 34.0 30.0 34.0 2 31.667488582705595 31.0 31.0 34.0 30.0 34.0 3 32.49953414973079 34.0 31.0 34.0 30.0 34.0 4 36.133963214560595 37.0 35.0 37.0 35.0 37.0 5 35.07789474425789 35.0 35.0 37.0 33.0 37.0 6 35.74766150209853 37.0 35.0 37.0 35.0 37.0 7 36.3085073593775 37.0 35.0 37.0 35.0 37.0 8 36.55352874974242 37.0 37.0 37.0 35.0 37.0 9 38.58027242994193 39.0 39.0 39.0 37.0 39.0 10 37.78879634505679 39.0 38.0 39.0 35.0 39.0 11 37.457587371142644 39.0 37.0 39.0 35.0 39.0 12 37.1198371197244 39.0 37.0 39.0 34.0 39.0 13 36.77890429198685 39.0 37.0 39.0 33.0 39.0 14 37.738134908124465 40.0 38.0 40.0 33.0 40.0 15 37.8859978970691 40.0 38.0 40.0 33.0 40.0 16 37.96526201215614 40.0 38.0 40.0 34.0 40.0 17 38.022170598067206 40.0 38.0 40.0 34.0 40.0 18 38.00782522777348 40.0 38.0 40.0 34.0 40.0 19 37.94243270709202 40.0 38.0 40.0 34.0 40.0 20 37.971927457690406 40.0 38.0 40.0 34.0 40.0 21 38.01147717685931 40.0 38.0 40.0 34.0 40.0 22 37.918672582113814 40.0 38.0 40.0 34.0 40.0 23 37.84241403785628 40.0 38.0 40.0 33.0 40.0 24 37.727287377659266 40.0 37.0 40.0 33.0 40.0 25 37.40905264196105 39.0 37.0 40.0 33.0 40.0 26 36.938483106983526 39.0 35.0 40.0 32.0 40.0 27 36.748535081431335 39.0 35.0 40.0 32.0 40.0 28 36.63346478119127 39.0 35.0 40.0 31.0 40.0 29 36.50656769623392 39.0 35.0 40.0 31.0 40.0 30 36.278355663030865 39.0 35.0 40.0 31.0 40.0 31 36.114532238776 39.0 35.0 40.0 30.0 40.0 32 35.870446071446814 38.0 35.0 40.0 30.0 40.0 33 35.489945031429485 38.0 35.0 40.0 27.0 40.0 34 35.349031049052535 38.0 35.0 40.0 26.0 40.0 35 35.19197698400258 38.0 35.0 40.0 25.0 40.0 36 34.76883523342709 38.0 35.0 40.0 23.0 40.0 37 34.43401569977051 38.0 34.0 40.0 21.0 40.0 38 33.86396643764564 38.0 33.0 40.0 16.0 40.0 39 33.65865944319885 38.0 33.0 40.0 15.0 40.0 40 33.3189726988846 38.0 33.0 40.0 12.0 40.0 41 32.86353317047654 38.0 32.0 40.0 10.0 40.0 42 32.72449403729268 37.0 32.0 40.0 10.0 40.0 43 32.58239121207371 37.0 32.0 40.0 10.0 40.0 44 32.37706484389172 36.0 32.0 40.0 10.0 40.0 45 32.17135012038135 36.0 31.0 40.0 10.0 40.0 46 31.847469702120016 35.0 31.0 40.0 9.0 40.0 47 31.58206802294555 35.0 30.0 39.0 9.0 40.0 48 31.466171697086367 35.0 30.0 39.0 9.0 40.0 49 31.34199662192508 35.0 30.0 39.0 9.0 40.0 50 31.11763291703286 35.0 29.0 39.0 9.0 40.0 51 31.191359666349054 35.0 30.0 39.0 9.0 40.0 52 30.844066969718853 35.0 29.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 6.0 14 8.0 15 35.0 16 100.0 17 267.0 18 631.0 19 1329.0 20 2266.0 21 3729.0 22 5760.0 23 9168.0 24 13278.0 25 17723.0 26 23973.0 27 30183.0 28 34819.0 29 33389.0 30 28219.0 31 27382.0 32 33270.0 33 41697.0 34 63019.0 35 79268.0 36 120371.0 37 189125.0 38 280942.0 39 95597.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.4291793109643 0.3862418300078023 0.1498822605274235 0.034696598500472894 8 98.57620658742222 1.1199780196167874 0.19822853610295554 0.10558685685803806 9 96.69255115106405 1.8860331220422029 0.7317988160886542 0.6896169108050844 10 53.48013927954363 31.273787864644518 6.2108672564501335 9.035205599361722 11 30.033868811632697 35.508534130357056 17.938757861773684 16.518839196236566 12 31.54713365587667 27.959822395685645 22.661193880013176 17.831850068424508 13 22.902573008159866 30.403907154015915 24.685837271191787 22.00768256663244 14 23.70781589315561 33.30133731610363 23.551152825307028 19.439693965433733 15 23.219157453868494 31.947553537555983 23.41174999427594 21.42153901429958 16 25.264319391876068 32.98660218148258 22.293533223314 19.45554520332735 17 25.901274967901244 32.73720937195635 20.20389975677156 21.157615903370854 18 24.647794300247103 33.93943770375446 21.449895117642605 19.96287287835584 19 25.694680500687767 31.312359210185654 22.09970780884816 20.893252480278417 20 23.509675419485397 32.67292379605445 22.456800973618257 21.360599810841894 21 24.470612685569563 31.324599888336834 24.513675215180555 19.691112210913047 22 23.97755112464533 32.38927470019145 22.776027292309156 20.857146882854067 23 23.652776872691664 33.679037090135424 22.53183016631471 20.136355870858203 24 22.9245005539127 32.73738549682182 25.02848819699214 19.309625752273334 25 25.440268132495213 33.69066133125741 20.133361748144964 20.735708788102414 26 25.421951146484812 32.31160363451273 22.510695182456555 19.755750036545912 27 25.32226447262051 32.27276810167336 21.527213933590357 20.87775349211577 28 27.68867816527205 32.54100627180646 20.37333187736778 19.39698368555371 29 28.514439597096757 32.02161404349228 20.338283029136335 19.12566333027463 30 27.714480458065548 32.00629118019511 20.567421479131845 19.711806882607494 31 28.198295463551844 32.876083828390975 19.04394139268976 19.881679315367425 32 27.70276815451082 33.06506580905599 20.856354320959387 18.3758117154738 33 28.069636249315316 34.09750977052691 19.05829556922676 18.774558410931014 34 24.797588498341785 35.24064820995493 20.680317517907497 19.28144577379579 35 26.20024692706141 36.84391286046155 19.611856021444964 17.343984191032074 36 27.09408061939593 35.49145001840505 18.91994948738858 18.494519874810443 37 25.95428855241212 35.00340801614713 19.199811898643663 19.84249153279709 38 26.513220813027605 34.1314138071327 20.00769665662168 19.34766872321801 39 26.65975670111082 33.38490856477608 18.74135887378716 21.213975860325938 40 25.757204827934814 33.60999614286545 20.29319506357227 20.33960396562747 41 26.05423941357465 32.843764915574546 20.65055241564059 20.451443255210215 42 24.922108778239423 32.12077234276013 21.08417183446376 21.872947044536694 43 25.787586367230915 31.471664151016505 22.234443330943908 20.50630615080868 44 26.693396550418385 31.63061684211639 20.898712351108443 20.777274256356787 45 26.04860341787914 32.095674549428566 21.267165569702296 20.588556462990002 46 25.879347422148406 33.25563291351036 20.504721027019315 20.360298637321918 47 25.781333934506208 33.08708141724156 21.052469358676525 20.079115289575697 48 25.79498361158127 32.70489045913991 20.843321080913523 20.656804848365297 49 25.117695441360105 33.456767509893815 20.3513162691822 21.07422077956388 50 23.72983150134119 33.89294073926651 20.612773631994138 21.76445412739816 51 22.914989811176532 33.53118026556107 20.845610704164823 22.708219219097572 52 23.927267475549467 32.524714721749135 22.0350699832153 21.512947819486104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 23.5 2 47.0 3 85.5 4 124.0 5 153.0 6 182.0 7 2971.5 8 5761.0 9 5670.5 10 5580.0 11 5576.0 12 5572.0 13 5336.0 14 5322.5 15 5545.0 16 5784.0 17 6023.0 18 7208.0 19 8393.0 20 9503.0 21 10613.0 22 13056.5 23 15500.0 24 19353.0 25 23206.0 26 27190.5 27 31175.0 28 36040.0 29 40905.0 30 40960.5 31 41016.0 32 41820.5 33 42625.0 34 42749.0 35 42873.0 36 41996.5 37 41120.0 38 39826.5 39 38309.5 40 38086.0 41 39299.5 42 40513.0 43 43211.5 44 45910.0 45 48122.5 46 50335.0 47 54754.0 48 59173.0 49 62590.0 50 66007.0 51 63648.5 52 61290.0 53 62580.5 54 63871.0 55 66027.0 56 68183.0 57 62662.0 58 57141.0 59 58875.0 60 60609.0 61 51953.5 62 43298.0 63 39879.5 64 30368.0 65 24275.0 66 21350.0 67 18425.0 68 15932.0 69 13439.0 70 12093.0 71 10747.0 72 7694.0 73 4641.0 74 3226.0 75 1811.0 76 1396.5 77 982.0 78 637.0 79 292.0 80 185.0 81 78.0 82 82.5 83 87.0 84 47.0 85 7.0 86 5.0 87 3.0 88 1.5 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1135558.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.211923279052222 #Duplication Level Percentage of deduplicated Percentage of total 1 80.11898721748996 20.199537589227226 2 8.10095559336128 4.084813418136671 3 3.2704194226268193 2.473606907207689 4 1.667826664038104 1.6819647158594515 5 0.9638640922004764 1.2150433771995865 6 0.6356595094182991 0.9615719269832479 7 0.4495549402502413 0.7933901264315593 8 0.35731893815129545 0.7206958123858294 9 0.2772501516028971 0.6291008596186054 >10 2.4777524424424455 14.602224162567978 >50 1.04608848944611 18.70591438967217 >100 0.6053249371905235 25.662556600543496 >500 0.01776103109121895 3.077503618312001 >1k 0.01123657069036301 5.192076495854505 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATGTAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3977 0.3502242950161947 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAA 3325 0.292807588868204 No Hit TATGTAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATT 3124 0.2751070398869983 No Hit TATGTAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAG 2782 0.2449896878891259 No Hit TATGTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2760 0.2430523143687949 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAA 2429 0.213903649131088 No Hit TATGTAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATGTAGGGAAG 2319 0.2042167815294331 No Hit TATGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2212 0.19479410122600518 No Hit TATGTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2129 0.1874849193083929 No Hit TATGTAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1986 0.17489199142624154 No Hit TATGTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 1955 0.17216205601122972 No Hit TATGTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1868 0.16450062436264815 No Hit TATGTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1808 0.15921687839810914 No Hit TATGTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1794 0.15798400433971668 No Hit TATGTAGGGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAAA 1773 0.15613469325212803 No Hit TATGTAGGGGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAAAAAA 1711 0.15067482242210437 No Hit TATGTAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 1455 0.12813083964007121 Illumina Single End Adapter 2 (100% over 34bp) TATGTAGGGGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAAAAA 1453 0.1279547147745866 No Hit TATGTAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 1416 0.12469640476312085 No Hit TATGTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1381 0.12161421961713977 No Hit TATGTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1375 0.12108584502068588 No Hit TATGTAGGGAGAGTGCAGTGCTTATGTAGGGAAAAAAAAAAAAAAAAAAAAA 1351 0.11897234663487026 No Hit TATGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 1339 0.11791559744196245 No Hit TATGTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1321 0.11633047365260075 No Hit TATGTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1202 0.10585104415626503 No Hit TATGTAGGGCAGAGTGCAGTGCTTATGTAGGGGAAAAAAAAAAAAAAAAAAA 1200 0.10567491929078039 No Hit TATGTAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 1160 0.10215242198108772 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.1581601292052013 0.0 0.0 0.0 0.0 7 0.1663499354502368 0.0 0.0 0.0 0.0 8 0.233629634065367 0.0 0.0 0.0 0.0 9 0.3405374274145398 0.0 0.0 0.0 0.0 10 0.5402630248741147 0.0 0.0 0.0 0.0 11 0.7746852208341626 0.0 0.0 0.0 0.0 12 0.9044892466963378 0.0 0.0 0.0 0.0 13 1.004263982993383 0.0 0.0 0.0 0.0 14 1.1290484501892462 0.0 0.0 0.0 0.0 15 1.2721499033955113 0.0 0.0 0.0 0.0 16 1.3853101294693886 0.0 0.0 0.0 0.0 17 1.490104424432746 0.0 0.0 0.0 0.0 18 1.5903194728935026 0.0 0.0 0.0 0.0 19 1.6950257054241176 0.0 0.0 0.0 0.0 20 1.806600807708633 0.0 0.0 0.0 0.0 21 1.913860850788775 0.0 0.0 0.0 0.0 22 2.034946695809461 0.0 0.0 0.0 0.0 23 2.1642223470751825 0.0 0.0 0.0 0.0 24 2.30019074322932 0.0 0.0 0.0 0.0 25 2.4339575785648995 0.0 0.0 0.0 0.0 26 2.574945533385349 0.0 0.0 0.0 0.0 27 2.6962955657042618 0.0 0.0 0.0 0.0 28 2.820023283707217 0.0 0.0 0.0 0.0 29 2.915306835934404 0.0 0.0 0.0 0.0 30 3.0066275786881866 0.0 0.0 0.0 0.0 31 3.0774297746130097 0.0 0.0 0.0 0.0 32 3.1637309587004805 0.0 0.0 0.0 0.0 33 3.2432513354667925 0.0 0.0 0.0 0.0 34 3.3237403989932703 0.0 0.0 0.0 0.0 35 3.4196403882496536 0.0 0.0 0.0 0.0 36 3.4852469006426796 0.0 0.0 0.0 0.0 37 3.5566655335966986 0.0 0.0 0.0 0.0 38 3.628964790878141 0.0 0.0 0.0 0.0 39 3.7031133592471717 0.0 0.0 0.0 0.0 40 3.778054489510884 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTAA 25 3.417129E-5 46.0 25 GGTACGT 20 6.3114235E-4 46.0 8 CGAACGA 20 6.3114235E-4 46.0 27 CATGCTA 20 6.3114235E-4 46.0 45 TAAACGT 20 6.3114235E-4 46.0 43 GTTAGCT 20 6.3114235E-4 46.0 10 TTCGTAC 25 3.417129E-5 46.0 17 CCGCTAT 30 1.8613828E-6 46.0 15 ATCCGTA 20 6.3114235E-4 46.0 17 GTAATCC 30 1.8613828E-6 46.0 27 CGTTACA 30 1.8613828E-6 46.0 42 TACGCTT 60 0.0 46.0 11 TAACCCG 30 1.8613828E-6 46.0 18 TAATTCG 20 6.3114235E-4 46.0 35 CATAGCG 20 6.3114235E-4 46.0 38 CCATAGA 30 1.8613828E-6 46.0 28 TTGCGAT 25 3.417129E-5 46.0 40 CTCGATA 30 1.8613828E-6 46.0 24 TTACGGC 20 6.3114235E-4 46.0 44 TTACGCT 30 1.8613828E-6 46.0 45 >>END_MODULE