##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527726_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1207397 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.847415555943904 33.0 31.0 34.0 3.0 34.0 2 30.409839514260845 34.0 31.0 34.0 16.0 34.0 3 32.441226870697875 34.0 31.0 34.0 28.0 34.0 4 36.29064425371274 37.0 35.0 37.0 35.0 37.0 5 36.31747055856525 37.0 37.0 37.0 35.0 37.0 6 36.08714449348474 37.0 35.0 37.0 35.0 37.0 7 36.56654687729057 37.0 37.0 37.0 35.0 37.0 8 36.707343980480324 37.0 37.0 37.0 35.0 37.0 9 38.776800836841566 39.0 39.0 39.0 39.0 39.0 10 38.31029727587529 39.0 39.0 39.0 37.0 39.0 11 38.079644888963614 39.0 38.0 39.0 37.0 39.0 12 37.67764455270304 39.0 37.0 39.0 35.0 39.0 13 37.5592601273649 39.0 37.0 39.0 35.0 39.0 14 38.34167386534835 40.0 38.0 40.0 35.0 40.0 15 38.391095886440006 40.0 38.0 40.0 35.0 40.0 16 38.45618798125223 40.0 38.0 40.0 35.0 40.0 17 38.39081594537671 40.0 38.0 40.0 35.0 40.0 18 38.33668213520491 40.0 38.0 40.0 35.0 40.0 19 38.278771605362614 40.0 38.0 40.0 34.0 40.0 20 38.19060010916045 40.0 38.0 40.0 34.0 40.0 21 38.18389891642931 40.0 38.0 40.0 34.0 40.0 22 38.22821491191381 40.0 38.0 40.0 34.0 40.0 23 38.16717782137938 40.0 38.0 40.0 35.0 40.0 24 38.09994392896454 40.0 38.0 40.0 34.0 40.0 25 38.047119547257445 40.0 38.0 40.0 34.0 40.0 26 37.967020789350975 40.0 38.0 40.0 34.0 40.0 27 37.847332733144114 40.0 37.0 40.0 34.0 40.0 28 37.71334035118524 40.0 37.0 40.0 34.0 40.0 29 37.72256349817003 40.0 37.0 40.0 34.0 40.0 30 37.869482034492385 40.0 37.0 40.0 34.0 40.0 31 37.935751869517645 40.0 37.0 40.0 34.0 40.0 32 37.909617135043405 40.0 37.0 40.0 34.0 40.0 33 37.798838327410124 40.0 37.0 40.0 34.0 40.0 34 37.477414636610824 40.0 36.0 40.0 33.0 40.0 35 37.45482471796766 40.0 36.0 40.0 33.0 40.0 36 37.417725901257 40.0 36.0 40.0 33.0 40.0 37 37.33001241513769 40.0 35.0 40.0 33.0 40.0 38 37.27960563095651 40.0 35.0 40.0 33.0 40.0 39 37.19482490017782 40.0 35.0 40.0 33.0 40.0 40 36.981261341547146 40.0 35.0 40.0 33.0 40.0 41 36.8396260716235 39.0 35.0 40.0 33.0 40.0 42 36.75089055215476 39.0 35.0 40.0 32.0 40.0 43 36.62022681851951 39.0 35.0 40.0 32.0 40.0 44 36.256545278810535 39.0 35.0 40.0 31.0 40.0 45 36.25543959443331 39.0 35.0 40.0 31.0 40.0 46 36.05044322621308 38.0 35.0 40.0 31.0 40.0 47 36.012617225320255 38.0 35.0 40.0 31.0 40.0 48 35.92551331500741 37.0 35.0 40.0 31.0 40.0 49 35.826839059563675 37.0 35.0 40.0 31.0 40.0 50 35.299385372002746 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 3.0 15 11.0 16 20.0 17 39.0 18 97.0 19 186.0 20 358.0 21 612.0 22 1055.0 23 1637.0 24 2354.0 25 3283.0 26 4488.0 27 5784.0 28 7994.0 29 10631.0 30 14652.0 31 19604.0 32 25732.0 33 39306.0 34 68513.0 35 91180.0 36 112705.0 37 227706.0 38 348245.0 39 221200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.39464815632306 0.41759255654933713 0.13582939165825325 0.051929895469344386 8 99.33584396847101 0.5150749919040712 0.10212051214306479 0.046960527481847314 9 98.40657215480907 0.879246842587815 0.2555911601569327 0.45858984244618795 10 58.62810657969169 30.85439172037035 4.130455848407773 6.387045851530193 11 34.7637106933345 24.69163001067586 22.80153089663135 17.743128399358287 12 31.897544883745777 16.649370505310184 26.960312142567854 24.492772468376184 13 24.67009608273004 17.45507070168304 29.85438923568636 28.020443979900563 14 25.7158995756988 18.535825416163863 30.025252671656467 25.723022336480877 15 26.055721523243804 19.550653182010556 27.464123233700267 26.929502061045373 16 30.762624058201236 19.413995562354387 24.30145180085755 25.521928578586827 17 31.310248410423412 19.937601302636995 22.626940434670615 26.12520985226897 18 29.765271903110573 19.912091880301176 25.010829081072757 25.31180713551549 19 30.445329912199547 20.928907393342868 22.662471415781223 25.96329127867636 20 29.08463413442306 22.75962255993679 22.686158736521627 25.469584569118524 21 31.07809610260751 20.617990602925136 24.48018340280786 23.823729891659497 22 30.25748780227216 20.052890639946927 23.829858778844077 25.859762778936833 23 30.072875781536645 20.55844100987496 24.42808786173893 24.940595346849463 24 29.83972960012324 21.36935904263469 23.157006353336975 25.633905003905095 25 28.06483700058887 22.484982155827783 22.76417781392533 26.686003029658018 26 27.984995821589752 21.76508638003904 22.73046893441014 27.519448863961067 27 27.053156501134257 20.042040853174225 24.10209732175912 28.802705323932393 28 28.88817845331734 22.333830546208084 22.446138262725515 26.331852737749056 29 30.731482685479588 21.626441013187875 22.31213097266268 25.329945328669858 30 29.15345988104989 20.80500448485461 22.507592780170896 27.533942853924597 31 31.315466246810285 21.206777886643746 22.423693283981986 25.05406258256398 32 32.508280209409165 21.28479696404745 22.705042334874115 23.50188049166927 33 32.02293860263028 20.95557633487577 22.466926785473213 24.554558277020732 34 29.182613506576544 23.207942375208816 24.619160060858196 22.990284057356444 35 28.123392720041547 24.676639083913578 25.422789687236264 21.77717850880862 36 30.05424065158353 24.246954398594664 22.2872013099254 23.411603639896406 37 29.174414049397175 26.11692757228981 20.93727249612182 23.771385882191193 38 30.235125646328427 24.68608088308982 21.391638375778637 23.687155094803117 39 30.422719287856438 22.750760520359087 21.47727715076317 25.349243041021303 40 28.311731766767682 23.491030704896566 22.146982309878194 26.050255218457558 41 26.29657022503783 23.930736948990265 22.53956238089046 27.233130445081443 42 25.810980149859574 21.58179952410019 23.529212015600503 29.078008310439728 43 25.959895543884905 21.17886660311397 25.250104149670737 27.61113370333039 44 26.915173716681423 20.985475365600546 24.15411004002826 27.945240877689777 45 27.396622651870096 21.42054353290591 23.94374012855755 27.239093686666436 46 27.22029291111374 23.764097475809532 23.051738574801824 25.9638710382749 47 26.79317573258837 22.53500712690192 24.117916476519323 26.553900663990387 48 28.155776434760067 21.76392686084196 24.779505001254766 25.30079170314321 49 28.223773953388985 21.452430310825683 24.169349435189915 26.154446300595414 50 25.70331051013047 23.15452166934322 24.91475463331448 26.22741318721183 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 4.5 6 9.0 7 8.0 8 7.0 9 7.0 10 7.0 11 204.0 12 401.0 13 1143.0 14 1885.0 15 2323.0 16 2761.0 17 2483.0 18 2205.0 19 2191.0 20 2177.0 21 2136.0 22 2095.0 23 2447.5 24 2800.0 25 3106.0 26 3412.0 27 3881.5 28 4351.0 29 5289.0 30 6227.0 31 7255.5 32 8284.0 33 10323.0 34 12362.0 35 15429.5 36 18497.0 37 19179.0 38 19861.0 39 22190.0 40 24519.0 41 25610.0 42 26701.0 43 29271.0 44 31841.0 45 34949.5 46 38058.0 47 41861.5 48 45665.0 49 48343.0 50 51021.0 51 53985.5 52 56950.0 53 62498.5 54 68047.0 55 72508.0 56 76969.0 57 90487.5 58 104006.0 59 107944.5 60 111883.0 61 114025.5 62 116168.0 63 113077.5 64 109987.0 65 98605.0 66 87223.0 67 72482.0 68 57741.0 69 47811.0 70 37881.0 71 32464.5 72 27048.0 73 22443.0 74 17838.0 75 18491.5 76 19145.0 77 13437.5 78 7730.0 79 4875.0 80 2020.0 81 1556.0 82 1092.0 83 743.5 84 395.0 85 247.5 86 100.0 87 59.5 88 19.0 89 11.5 90 4.0 91 3.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1207397.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.779406051617569 #Duplication Level Percentage of deduplicated Percentage of total 1 67.01863135584044 5.883837776965925 2 9.651543844710288 1.6946964487540357 3 3.8184602406177484 1.0057143883302164 4 1.772104289250161 0.6223209248456126 5 0.9385279420251611 0.41198589469139413 6 0.6802415509318672 0.3583270073287773 7 0.43898749140288623 0.26978346070248405 8 0.36046170503526903 0.25317117396504224 9 0.32640233085209647 0.25790567388704777 >10 8.225338736433324 21.304836011363133 >50 4.674649033437133 28.50817055360585 >100 2.006664764201611 29.74711452501057 >500 0.0529812478997125 3.2215367344416754 >1k 0.03216718622482544 4.784337138167862 >5k 0.002838281137484598 1.6762622879403752 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 8793 0.7282608785676956 No Hit ACCTGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5745 0.47581698480284446 No Hit ACCTGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5643 0.46736905922409944 No Hit ACCTGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4461 0.36947250987040714 No Hit ACCTGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3628 0.30048111764398955 No Hit ACCTGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 3284 0.271990074515673 No Hit ACCTGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3136 0.2597323001465135 No Hit ACCTGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2796 0.23157254821736345 No Hit ACCTGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2602 0.21550492505778962 No Hit ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 2542 0.2105355570702925 No Hit ACCTGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2116 0.17525304435906333 No Hit ACCTGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2011 0.16655665038094347 No Hit ACCTGAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1918 0.158854130000323 No Hit ACCTGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1638 0.13566374605867002 No Hit ACCTGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1541 0.12762993447888307 No Hit ACCTGAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 1529 0.12663606088138368 No Hit ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1326 0.10982303252368526 No Hit ACCTGAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 1299 0.10758681692931157 No Hit ACCTGAGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1270 0.10518495573535465 No Hit ACCTGAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1266 0.10485366453618819 No Hit ACCTGAGGGATCTTGGATCCTTTTGAAAAGTTAAGAATATATGAAGGTAA 1249 0.10344567693973067 No Hit ACCTGAGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1239 0.1026174489418145 No Hit ACCTGAGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1218 0.10087817014619054 No Hit ACCTGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1216 0.10071252454660728 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.013251647966658854 0.0 0.0 0.0 0.0 7 0.013500116366033708 0.0 0.0 0.0 0.0 8 0.020540054348321225 0.0 0.0 0.0 0.0 9 0.03785001950476935 0.0 0.0 0.0 0.0 10 0.056153858258716896 0.0 0.0 0.0 0.0 11 0.08646700298244903 0.0 0.0 0.0 0.0 12 0.09806219495327552 0.0 0.0 0.0 0.0 13 0.10874633612639421 0.0 0.0 0.0 0.0 14 0.12415137688763514 0.0 0.0 0.0 0.0 15 0.13524963205971194 0.0 0.0 0.0 0.0 16 0.14792152042782947 0.0 0.0 0.0 0.0 17 0.15943388959886434 0.0 0.0 0.0 0.0 18 0.17119472716927406 0.0 0.0 0.0 0.0 19 0.18270709634030893 0.0 0.0 0.0 0.0 20 0.19305994631426118 0.0 0.0 0.0 0.0 21 0.20275021388988046 0.0 0.0 0.0 0.0 22 0.21285459546445784 0.0 0.0 0.0 0.0 23 0.22511236983361727 0.0 0.0 0.0 0.0 24 0.235796511006736 0.0 0.0 0.0 0.0 25 0.24656347497964629 0.0 0.0 0.0 0.0 26 0.2606433509442213 0.0 0.0 0.0 0.0 27 0.2743091129098383 0.0 0.0 0.0 0.0 28 0.2929442428629523 0.0 0.0 0.0 0.0 29 0.30304862443752967 0.0 0.0 0.0 0.0 30 0.31845366519877055 0.0 0.0 0.0 0.0 31 0.329634743170639 0.0 0.0 0.0 0.0 32 0.34288639113729785 0.0 0.0 0.0 0.0 33 0.35555827950541535 0.0 0.0 0.0 0.0 34 0.3707148518672814 0.0 0.0 0.0 0.0 35 0.3908407922166446 0.0 0.0 0.0 0.0 36 0.4055004277797609 0.0 0.0 0.0 0.0 37 0.4194146581447527 0.0 0.0 0.0 0.0 38 0.4313411413147457 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 7.856639E-4 44.000004 37 ACGTTCA 20 7.856639E-4 44.000004 30 GACGTAT 20 7.856639E-4 44.000004 35 CGCATAT 20 7.856639E-4 44.000004 37 ACCGATA 20 7.856639E-4 44.000004 24 GCGTTTA 20 7.856639E-4 44.000004 17 TCGATTG 20 7.856639E-4 44.000004 11 CGTTAAC 20 7.856639E-4 44.000004 35 TCAATCG 20 7.856639E-4 44.000004 16 AATTGCG 20 7.856639E-4 44.000004 41 TCGTAAC 20 7.856639E-4 44.000004 25 TTACGAA 20 7.856639E-4 44.000004 41 ACGTATT 20 7.856639E-4 44.000004 36 TCATAGG 20 7.856639E-4 44.000004 44 CGGTATG 20 7.856639E-4 44.000004 15 ACGTTTA 35 1.4461693E-7 44.0 12 CCGATAC 50 2.7284841E-11 44.0 14 CGATTGC 30 2.527824E-6 44.0 44 CGTTATG 25 4.4429733E-5 44.0 36 CGAATCT 35 1.4461693E-7 44.0 18 >>END_MODULE