##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527725_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1528645 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.062772586179264 33.0 31.0 34.0 31.0 34.0 2 32.66267249753867 34.0 31.0 34.0 31.0 34.0 3 33.03491000199523 34.0 31.0 34.0 31.0 34.0 4 36.4449528831089 37.0 37.0 37.0 35.0 37.0 5 36.237427918188985 37.0 37.0 37.0 35.0 37.0 6 35.878960778990546 37.0 35.0 37.0 35.0 37.0 7 36.49331335921682 37.0 37.0 37.0 35.0 37.0 8 36.63775108020502 37.0 37.0 37.0 35.0 37.0 9 38.70813629063648 39.0 39.0 39.0 39.0 39.0 10 38.056338129519936 39.0 38.0 39.0 37.0 39.0 11 37.70640796260741 39.0 38.0 39.0 35.0 39.0 12 37.30476271469177 39.0 37.0 39.0 35.0 39.0 13 37.173460810063816 39.0 37.0 39.0 34.0 39.0 14 37.96760464332792 40.0 38.0 40.0 34.0 40.0 15 38.034804025787544 40.0 38.0 40.0 34.0 40.0 16 38.110817096186494 40.0 38.0 40.0 34.0 40.0 17 38.04042011062084 40.0 38.0 40.0 34.0 40.0 18 38.045537714773545 40.0 38.0 40.0 34.0 40.0 19 37.99891341678415 40.0 38.0 40.0 34.0 40.0 20 37.974846350853205 40.0 38.0 40.0 34.0 40.0 21 37.957796610723875 40.0 38.0 40.0 34.0 40.0 22 37.96342316234312 40.0 38.0 40.0 34.0 40.0 23 37.93680874238296 40.0 37.0 40.0 34.0 40.0 24 37.86513088388737 40.0 37.0 40.0 34.0 40.0 25 37.802842386558034 40.0 37.0 40.0 34.0 40.0 26 37.70372519453503 40.0 37.0 40.0 34.0 40.0 27 37.607072276427814 40.0 37.0 40.0 33.0 40.0 28 37.510501784259915 40.0 36.0 40.0 33.0 40.0 29 37.43699223822405 40.0 36.0 40.0 33.0 40.0 30 37.294132385216976 40.0 36.0 40.0 33.0 40.0 31 37.22109449872273 40.0 36.0 40.0 33.0 40.0 32 37.10244890082393 39.0 35.0 40.0 32.0 40.0 33 36.9596845572386 39.0 35.0 40.0 32.0 40.0 34 36.78903865841971 39.0 35.0 40.0 31.0 40.0 35 36.6728815388792 39.0 35.0 40.0 31.0 40.0 36 36.65051401731599 39.0 35.0 40.0 31.0 40.0 37 36.54156197154997 39.0 35.0 40.0 31.0 40.0 38 36.4959686519761 39.0 35.0 40.0 31.0 40.0 39 36.40913554160711 38.0 35.0 40.0 31.0 40.0 40 36.158790301214474 38.0 35.0 40.0 30.0 40.0 41 36.018353509153535 38.0 35.0 40.0 30.0 40.0 42 35.932098688707974 38.0 35.0 40.0 30.0 40.0 43 35.788168606838084 38.0 35.0 40.0 30.0 40.0 44 35.63979668268303 38.0 34.0 40.0 30.0 40.0 45 35.53195019118239 37.0 34.0 40.0 29.0 40.0 46 35.36786696715065 37.0 34.0 40.0 29.0 40.0 47 35.19890229582408 37.0 34.0 40.0 29.0 40.0 48 34.98804823879972 36.0 34.0 40.0 28.0 40.0 49 35.2836577491831 37.0 34.0 40.0 29.0 40.0 50 35.32834176672805 36.0 34.0 40.0 29.0 40.0 51 35.31813403373576 36.0 34.0 40.0 30.0 40.0 52 34.818065018365935 35.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 2.0 15 6.0 16 18.0 17 70.0 18 157.0 19 337.0 20 658.0 21 1154.0 22 1896.0 23 2965.0 24 4346.0 25 6190.0 26 8123.0 27 11139.0 28 14697.0 29 18981.0 30 23967.0 31 30844.0 32 41195.0 33 56939.0 34 102950.0 35 119440.0 36 155773.0 37 244392.0 38 470977.0 39 211425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.4939963169997 0.39512116940165964 0.07712712892790674 0.033755384670737805 8 99.41569167465303 0.48683638123959455 0.06077277588975858 0.03669916821760448 9 98.47786765403347 0.841333337694494 0.2465582264031217 0.43424078186891 10 58.76570426750488 30.700784027684648 4.118287764654318 6.415223940156152 11 34.739458801749265 24.746425756143513 22.68636603004622 17.82774941206101 12 32.01083312345247 16.712251700035 26.88479012458746 24.39212505192507 13 24.712735788884928 17.36354745542621 29.823601948130534 28.10011480755833 14 25.898295549326367 18.41199231999581 29.90498120884836 25.784730921829464 15 26.083034321245286 19.538283905027 27.405708977558557 26.97297279616916 16 30.96493953795682 19.35132094109489 24.2516084506213 25.432131070326992 17 31.454392615682515 19.87910862234201 22.53230802442686 26.134190737548614 18 29.86612326602972 19.912406085127678 24.939668791642273 25.281801857200332 19 30.49792463259946 20.81346552011749 22.717112213757936 25.971497633525114 20 29.13285949321131 22.7313732096072 22.595762914214877 25.540004382966615 21 31.070588658583254 20.56442143205257 24.477756444432817 23.88723346493136 22 30.37075318337482 20.047820128283544 23.78956526858754 25.7918614197541 23 30.104438898501613 20.461977764621608 24.431833421101697 25.001749915775086 24 29.76269833741647 21.314104975321282 23.172940741637202 25.750255945625046 25 28.08899384749239 22.386296360502275 22.851283326082903 26.673426465922432 26 28.076564539183398 21.67134946308659 22.701673704489924 27.55041229324009 27 27.112704388527092 19.987047352393787 24.006227737636927 28.894020521442194 28 28.917243702756362 22.292029869590387 22.35770895139159 26.433017476261654 29 30.745398702772718 21.58002675572157 22.29811368892058 25.37646085258513 30 29.225359713995076 20.731039580805223 22.519486211644953 27.52411449355475 31 31.3972832148733 21.152458549892224 22.438434037987893 25.01182419724658 32 32.71328529514701 21.147094322095715 22.65333023690916 23.48629014584812 33 32.13833165973787 20.785270615479725 22.43830320316359 24.638094521618818 34 29.196118130762866 23.029153269725803 24.662887720824653 23.111840878686678 35 28.13707564542454 24.674597437599964 25.357620637885187 21.830706279090307 36 30.150558174069193 24.17029460731563 22.301319142116057 23.37782807649912 37 29.398257934314376 25.99602916308234 20.90426488818529 23.701448014418 38 30.318942592949966 24.634496563950425 21.340926114303844 23.70563472879576 39 30.492756657039404 22.65941405623935 21.50937595059677 25.338453336124477 40 28.325216122775398 23.373183440236286 22.202735102002098 26.098865334986215 41 26.370478430243775 23.851711810132503 22.48756251451449 27.290247245109228 42 25.854662135420586 21.46162123972538 23.461104442169372 29.222612182684664 43 25.945657755724845 21.11373144189789 25.199703004948827 27.740907797428445 44 26.74276892280418 20.854743907185775 24.2300861220231 28.172401047986945 45 27.493957066552404 21.3549254405045 23.81861059958329 27.332506893359803 46 27.018634149851668 23.68280405195451 23.035433341292453 26.263128456901374 47 26.85633355030108 22.42907934805007 24.054374952981235 26.66021214866761 48 28.308338430440028 21.588203932240642 24.726080940964057 25.37737669635527 49 28.248939420205478 21.387045389871425 24.197769920419717 26.166245269503385 50 25.828756840208158 23.010247637613706 24.908464686045484 26.252530836132653 51 26.054316077310297 22.547877368519178 24.539183394444102 26.858623159726424 52 26.402860049259314 22.33690621432707 25.151490372192363 26.108743364221255 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.0 6 6.0 7 8.5 8 11.0 9 9.5 10 8.0 11 221.0 12 434.0 13 1324.0 14 2699.0 15 3184.0 16 2911.0 17 2638.0 18 2580.5 19 2523.0 20 2377.0 21 2231.0 22 2745.0 23 3259.0 24 3437.5 25 3616.0 26 3601.0 27 3586.0 28 5474.5 29 7363.0 30 7541.5 31 7720.0 32 10372.0 33 13024.0 34 14449.0 35 15874.0 36 19006.0 37 22138.0 38 24467.5 39 28775.5 40 30754.0 41 32440.5 42 34127.0 43 36990.0 44 39853.0 45 43630.0 46 47407.0 47 51613.5 48 55820.0 49 58371.0 50 60922.0 51 65526.5 52 70131.0 53 78223.0 54 86315.0 55 87968.5 56 89622.0 57 102766.0 58 115910.0 59 131281.0 60 146652.0 61 142183.5 62 137715.0 63 138467.0 64 123431.0 65 107643.0 66 97227.0 67 86811.0 68 69192.0 69 51573.0 70 45003.5 71 38434.0 72 33033.5 73 27633.0 74 27111.5 75 26590.0 76 19324.5 77 12059.0 78 7984.0 79 3909.0 80 2825.5 81 1742.0 82 1304.5 83 867.0 84 564.5 85 262.0 86 143.5 87 25.0 88 20.5 89 10.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1528645.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.653163349599934 #Duplication Level Percentage of deduplicated Percentage of total 1 66.44179108592817 5.084898804206011 2 9.778387495398128 1.496711935959345 3 4.240459405766531 0.9735878552903621 4 2.2893062686310484 0.7008173932438608 5 1.2186161855447915 0.46631343642203354 6 0.7194679577091623 0.3303723483090765 7 0.5269463572421503 0.2822964583915573 8 0.372963146827386 0.22834783088406474 9 0.2976852780752207 0.205041065389267 >10 6.050362890600907 13.56837862134711 >50 5.063211885166934 27.743696560443258 >100 2.8810436947528695 37.50114256219241 >500 0.07356584256197946 3.676791840023065 >1k 0.043626255472801766 6.068804735537243 >5k 0.0017108335479530104 0.9260228366918836 >10k+ 8.554167739765052E-4 0.7467757156694461 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 11407 0.7462164204246244 No Hit ACCTGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7437 0.48650929417883154 No Hit ACCTGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6708 0.4388200007195915 No Hit ACCTGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4616 0.30196677449636766 No Hit ACCTGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4507 0.2948362765717351 No Hit ACCTGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 4427 0.2896028835995277 No Hit ACCTGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4122 0.26965057289298694 No Hit ACCTGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3647 0.2385773021205054 No Hit ACCTGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3438 0.22490506298061355 No Hit ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 3197 0.20913946665183872 No Hit ACCTGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2807 0.18362667591232756 No Hit ACCTGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2670 0.17466449044742238 No Hit ACCTGAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2525 0.16517896568529644 No Hit ACCTGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2168 0.14182494954682087 No Hit ACCTGAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1968 0.12874146711630235 No Hit ACCTGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1890 0.12363890896840012 No Hit ACCTGAGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1662 0.10872373899760898 No Hit ACCTGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1655 0.10826581711254084 No Hit ACCTGAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTCGG 1654 0.10820039970038825 No Hit ACCTGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1648 0.10780789522747271 No Hit ACCTGAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1594 0.10427535497123269 No Hit ACCTGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1560 0.10205116295804455 No Hit ACCTGAGGGATCTTGGATCCTTTTGAAAAGTTAAGAATATATGAAGGTAAAT 1544 0.10100448436360307 No Hit ACCTGAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1536 0.10048114506638231 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.011644299363161493 0.0 0.0 0.0 0.0 7 0.011709716775314086 0.0 0.0 0.0 0.0 8 0.016943109747521497 0.0 0.0 0.0 0.0 9 0.032904958312754105 0.0 0.0 0.0 0.0 10 0.05043682476964894 0.0 0.0 0.0 0.0 11 0.07810839011019563 0.0 0.0 0.0 0.0 12 0.08693974075079564 0.0 0.0 0.0 0.0 13 0.09511691726986972 0.0 0.0 0.0 0.0 14 0.10813498228823566 0.0 0.0 0.0 0.0 15 0.11768592446251419 0.0 0.0 0.0 0.0 16 0.12749853628540309 0.0 0.0 0.0 0.0 17 0.13776906999336014 0.0 0.0 0.0 0.0 18 0.14640416839750237 0.0 0.0 0.0 0.0 19 0.15909514635510533 0.0 0.0 0.0 0.0 20 0.16936568006306238 0.0 0.0 0.0 0.0 21 0.1797670485953246 0.0 0.0 0.0 0.0 22 0.18997216489112906 0.0 0.0 0.0 0.0 23 0.2012893771935276 0.0 0.0 0.0 0.0 24 0.21175616313794243 0.0 0.0 0.0 0.0 25 0.22052209636638984 0.0 0.0 0.0 0.0 26 0.233343909148298 0.0 0.0 0.0 0.0 27 0.24564238263298543 0.0 0.0 0.0 0.0 28 0.26323966650203284 0.0 0.0 0.0 0.0 29 0.2735756176221425 0.0 0.0 0.0 0.0 30 0.28580867369467733 0.0 0.0 0.0 0.0 31 0.2968642163484655 0.0 0.0 0.0 0.0 32 0.31197563855571436 0.0 0.0 0.0 0.0 33 0.32368535533102843 0.0 0.0 0.0 0.0 34 0.33513340245773215 0.0 0.0 0.0 0.0 35 0.35488946092781515 0.0 0.0 0.0 0.0 36 0.36993546572291147 0.0 0.0 0.0 0.0 37 0.3820376869711411 0.0 0.0 0.0 0.0 38 0.3933548992735396 0.0 0.0 0.0 0.0 39 0.40578420758253225 0.0 0.0 0.0 0.0 40 0.4185406029522878 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGC 20 6.3121103E-4 46.000004 20 ACGATTC 20 6.3121103E-4 46.000004 42 GTTACGA 20 6.3121103E-4 46.000004 28 AACGAAC 20 6.3121103E-4 46.000004 44 AGTCGTA 40 5.6134013E-9 46.000004 41 GTACGGT 20 6.3121103E-4 46.000004 31 CGTATCA 25 3.4176883E-5 46.0 31 GTTACGT 25 3.4176883E-5 46.0 46 TACGATA 25 3.4176883E-5 46.0 41 GTGTCGA 25 3.4176883E-5 46.0 41 TTACGTG 25 3.4176883E-5 46.0 29 ATAACCG 25 3.4176883E-5 46.0 37 CGATCTA 30 1.8618102E-6 46.0 42 GCGCGTA 35 1.019871E-7 45.999996 37 ACCTGAG 161325 0.0 43.383854 1 CCTGAGG 160870 0.0 43.29496 2 CTGAGGG 158705 0.0 43.29284 3 AGGGATT 5065 0.0 43.275417 6 TGAGGGA 49035 0.0 43.190376 4 TGAGGGG 93820 0.0 43.11458 4 >>END_MODULE