##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527723_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2024702 Sequences flagged as poor quality 0 Sequence length 50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13059255139769 31.0 31.0 34.0 31.0 34.0 2 32.74562034314185 34.0 31.0 34.0 31.0 34.0 3 33.03508269365072 34.0 31.0 34.0 31.0 34.0 4 36.42770541047522 37.0 37.0 37.0 35.0 37.0 5 36.44620047789749 37.0 37.0 37.0 35.0 37.0 6 35.27242231202419 37.0 35.0 37.0 32.0 37.0 7 36.24054700395416 37.0 35.0 37.0 35.0 37.0 8 36.56594106194393 37.0 37.0 37.0 35.0 37.0 9 38.69750264483366 39.0 39.0 39.0 39.0 39.0 10 37.91091627311081 39.0 38.0 39.0 35.0 39.0 11 37.464337467933554 39.0 37.0 39.0 35.0 39.0 12 36.86888638426791 38.0 35.0 39.0 34.0 39.0 13 36.700110929904746 38.0 35.0 39.0 33.0 39.0 14 37.247972788094245 39.0 36.0 40.0 33.0 40.0 15 37.25197930362098 39.0 36.0 40.0 33.0 40.0 16 37.33094499832568 39.0 36.0 40.0 33.0 40.0 17 37.11091311215181 39.0 36.0 40.0 32.0 40.0 18 36.95830793864974 39.0 36.0 40.0 32.0 40.0 19 36.96065692630323 39.0 36.0 40.0 31.0 40.0 20 36.7087275065664 38.0 35.0 40.0 31.0 40.0 21 36.71236013991195 38.0 35.0 40.0 31.0 40.0 22 36.818622197241865 38.0 35.0 40.0 31.0 40.0 23 36.75959474530079 38.0 35.0 40.0 31.0 40.0 24 36.68794074387243 38.0 35.0 40.0 31.0 40.0 25 36.61838285337793 38.0 35.0 40.0 31.0 40.0 26 36.46339955213162 38.0 35.0 40.0 31.0 40.0 27 36.30722694006328 38.0 35.0 40.0 31.0 40.0 28 36.082834906075064 38.0 34.0 40.0 30.0 40.0 29 36.51192175441127 39.0 35.0 40.0 31.0 40.0 30 36.71260758373331 39.0 35.0 40.0 31.0 40.0 31 36.77697557467716 39.0 35.0 40.0 32.0 40.0 32 36.79143943158055 39.0 35.0 40.0 32.0 40.0 33 36.67083452280879 39.0 35.0 40.0 32.0 40.0 34 36.20269847118242 39.0 35.0 40.0 30.0 40.0 35 36.129579068919774 39.0 35.0 40.0 30.0 40.0 36 36.21073027042992 38.0 35.0 40.0 30.0 40.0 37 36.13508061927138 38.0 35.0 40.0 30.0 40.0 38 36.065192309781885 38.0 35.0 40.0 30.0 40.0 39 35.945647310073284 38.0 35.0 40.0 30.0 40.0 40 35.688723575123646 38.0 34.0 40.0 30.0 40.0 41 35.5449814343049 37.0 34.0 40.0 29.0 40.0 42 35.471204651351165 37.0 34.0 40.0 29.0 40.0 43 35.37085902024101 37.0 34.0 40.0 29.0 40.0 44 35.02397933127937 37.0 34.0 40.0 28.0 40.0 45 34.95723370649113 36.0 34.0 40.0 28.0 40.0 46 34.790992452222596 36.0 34.0 40.0 28.0 40.0 47 34.670426067638594 36.0 33.0 40.0 27.0 40.0 48 34.55070128838713 35.0 33.0 39.0 27.0 40.0 49 34.51235688017298 35.0 33.0 39.0 27.0 40.0 50 33.8378536693301 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 0.0 13 4.0 14 15.0 15 28.0 16 86.0 17 246.0 18 663.0 19 1481.0 20 2633.0 21 3192.0 22 3696.0 23 4839.0 24 6718.0 25 9250.0 26 12454.0 27 16926.0 28 23046.0 29 30855.0 30 40692.0 31 52628.0 32 70852.0 33 105498.0 34 187702.0 35 159956.0 36 236512.0 37 352853.0 38 598413.0 39 103461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.42564387253037 0.4548817554385781 0.05916920119602786 0.060305170835016714 8 99.50091420860947 0.3868223570678549 0.051266803707409776 0.06099663061527079 9 98.31071436685498 1.0024191214312033 0.30122951426926037 0.3856369974445622 10 56.61366462817738 32.14453287446745 4.7771474518225405 6.464655045532626 11 37.052415614742316 22.96698477109224 24.025263964771113 15.955335649394332 12 34.100475032869035 15.443803581959223 24.740480327475353 25.715241057696392 13 27.158613958992483 16.333070249350275 28.877780532641346 27.630535259015893 14 25.740923849534404 18.542778147105103 30.894966271579722 24.821331731780777 15 27.164985266967683 19.5143779183307 28.915958990508233 24.40467782419339 16 35.1267001267347 21.043393052409687 23.037513668678155 20.792393152177457 17 32.102403217856256 20.733421510918642 23.70521686648208 23.45895840474302 18 30.92385941239748 19.792147190055623 25.27715189692113 24.00684150062577 19 31.506661227183063 22.256213506975346 23.157926450410972 23.079198815430615 20 30.727237884883802 23.426064675196645 23.7387032758401 22.107994164079457 21 31.633544096859683 22.00180569782615 24.798908678906823 21.565741526407344 22 28.539014630301153 21.09915434468875 26.912602447174944 23.449228577835157 23 29.591218855910643 22.06023404925762 25.80409363945904 22.544453455372693 24 30.578475252160565 22.158618897990916 23.90188778398006 23.361018065868457 25 29.102653131176837 23.399690423578384 21.871465529248255 25.626190915996528 26 26.147057690465065 23.054207483372863 24.448733690192434 26.350001135969634 27 25.408035355326362 20.77811944671364 25.500641575896104 28.313203622063888 28 26.583516981758304 23.06556717976275 23.132885728368915 27.218030110110032 29 29.400968636372166 22.95646470443552 22.666100986713104 24.976465672479208 30 29.10783907952874 21.23048231295272 25.69207715505788 23.969601452460658 31 30.341304547533415 21.908162287586023 23.74423495408213 24.00629821079843 32 32.59250003210349 21.940858457195183 23.647529364815167 21.81911214588616 33 33.01216672873341 21.722258386666287 22.786513768445925 22.479061116154377 34 29.278333305345676 22.296219394261477 27.195458887283163 21.229988413109684 35 26.52494046037392 26.202522642838304 26.746207590055228 20.526329306732546 36 27.29917785432128 26.835405901708004 24.21319285504731 21.65222338892341 37 29.153919934884243 26.907663448744557 21.75288017693468 22.18553643943652 38 29.132435291712067 26.332319521588854 22.268956122925747 22.266289063773335 39 29.47742433207455 23.875167802471672 22.499854299546303 24.147553565907476 40 27.660959489347075 23.683534663372686 22.536452277915465 26.119053569364777 41 24.603719460937956 25.21877293547396 23.620019143557915 26.557488460030164 42 24.034993791678975 23.994247054628286 23.776239663911035 28.194519489781705 43 24.730701110583187 22.318988177025556 24.578135449068554 28.372175263322703 44 25.739195200083763 22.2364575132538 24.23452932826658 27.78981795839585 45 27.536941238760075 22.061468798865217 23.38521915817735 27.016370804197358 46 26.645945921918386 25.392181170364825 23.000915690308993 24.9609572174078 47 24.614733427437717 24.698202500911247 24.751296734037897 25.935767337613143 48 24.95769747844374 23.413815959089288 26.640809363550783 24.987677198916185 49 28.0870468839365 22.683436871203764 25.572948512916966 23.656567731942772 50 25.694941774147505 22.921150865658255 24.69686897133504 26.687038388859204 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 32.5 8 65.0 9 39.0 10 13.0 11 113.0 12 213.0 13 371.0 14 529.0 15 1830.0 16 3131.0 17 4418.0 18 5705.0 19 5294.0 20 4883.0 21 5018.0 22 5153.0 23 5270.0 24 5387.0 25 5485.0 26 5583.0 27 6554.5 28 7526.0 29 8954.0 30 10382.0 31 11171.0 32 11960.0 33 14913.5 34 17867.0 35 23487.0 36 29107.0 37 32514.5 38 35922.0 39 39686.5 40 43451.0 41 45118.5 42 46786.0 43 50655.0 44 54524.0 45 59731.5 46 64939.0 47 69585.5 48 74232.0 49 78893.5 50 83555.0 51 87420.5 52 91286.0 53 97537.0 54 103788.0 55 107220.0 56 110652.0 57 121260.5 58 131869.0 59 142016.5 60 152164.0 61 161668.5 62 171173.0 63 179131.5 64 187090.0 65 197819.5 66 208549.0 67 167578.5 68 126608.0 69 100827.0 70 75046.0 71 64516.5 72 53987.0 73 45482.0 74 36977.0 75 31337.0 76 25697.0 77 24832.0 78 23967.0 79 16195.0 80 8423.0 81 6187.5 82 3952.0 83 2849.0 84 1746.0 85 1090.0 86 434.0 87 323.0 88 212.0 89 148.5 90 85.0 91 54.5 92 24.0 93 41.0 94 58.0 95 30.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2024702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.216197052423933 #Duplication Level Percentage of deduplicated Percentage of total 1 64.18779576531432 5.273795783685649 2 9.780425784296423 1.6071581100077459 3 3.8031785563804257 0.937429933343243 4 1.8366941296667567 0.6036256357748938 5 1.037056479284296 0.4260330194146387 6 0.710281056757446 0.3501485474953851 7 0.5193081073611818 0.29867164187005557 8 0.42533361787638524 0.2795699853994211 9 0.35079415759767857 0.25939745312954243 >10 10.49244875289944 25.10087262123629 >50 4.763654976776268 26.93456262457314 >100 2.014265286898852 27.73610708349093 >500 0.0488454752809664 2.603238616011074 >1k 0.025033306081495284 3.494629496628898 >5k 0.003663410646072481 1.932074307845962 >10k+ 0.0012211368820241601 2.1626851400931417 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 27414 1.3539770297061 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 15697 0.7752745836177373 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 8937 0.44139828972362355 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 7326 0.3618310250101002 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 6232 0.3077983821816741 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG 5488 0.2710522338596001 No Hit TGCGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5403 0.2668540851937717 No Hit TGCGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 5128 0.25327183951020943 No Hit TGCGGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 3817 0.18852157008784504 No Hit TGCGGAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 3139 0.15503516072982593 No Hit TGCGGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 3004 0.14836751284880442 No Hit TGCGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2871 0.14179864493639063 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGC 2732 0.1349334371181537 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACT 2665 0.13162430816979487 No Hit TGCGGAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 2636 0.13019199862498285 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 2532 0.1250554402573811 No Hit TGCGGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 2469 0.12194387124623773 No Hit TGCGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2373 0.11720243275306687 No Hit TGCGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2306 0.11389330380470804 No Hit TGCGGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2028 0.10016288816823414 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.024349262261804453 0.0 0.0 0.0 0.0 7 0.02459621218332377 0.0 0.0 0.0 0.0 8 0.03457298901270409 0.0 0.0 0.0 0.0 9 0.036597978369162475 0.0 0.0 0.0 0.0 10 0.05314362311095658 0.0 0.0 0.0 0.0 11 0.07033133764870089 0.0 0.0 0.0 0.0 12 0.07976482465073872 0.0 0.0 0.0 0.0 13 0.09053184122898086 0.0 0.0 0.0 0.0 14 0.09952081837228392 0.0 0.0 0.0 0.0 15 0.10999149504470287 0.0 0.0 0.0 0.0 16 0.12110424151307204 0.0 0.0 0.0 0.0 17 0.13231576795004896 0.0 0.0 0.0 0.0 18 0.1433297344498104 0.0 0.0 0.0 0.0 19 0.15552906057286456 0.0 0.0 0.0 0.0 20 0.16713570688427234 0.0 0.0 0.0 0.0 21 0.17745821360377972 0.0 0.0 0.0 0.0 22 0.18531122110809392 0.0 0.0 0.0 0.0 23 0.19454714817291632 0.0 0.0 0.0 0.0 24 0.2060550145157164 0.0 0.0 0.0 0.0 25 0.2157848414235774 0.0 0.0 0.0 0.0 26 0.22674941793903497 0.0 0.0 0.0 0.0 27 0.2349975453177801 0.0 0.0 0.0 0.0 28 0.24813528114260766 0.0 0.0 0.0 0.0 29 0.2583096179092034 0.0 0.0 0.0 0.0 30 0.26892846453453395 0.0 0.0 0.0 0.0 31 0.2791521912854336 0.0 0.0 0.0 0.0 32 0.2910551775026646 0.0 0.0 0.0 0.0 33 0.30147646419077967 0.0 0.0 0.0 0.0 34 0.31150263100446385 0.0 0.0 0.0 0.0 35 0.32370195712751804 0.0 0.0 0.0 0.0 36 0.33861773238728465 0.0 0.0 0.0 0.0 37 0.35219997807084696 0.0 0.0 0.0 0.0 38 0.36400418431947024 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATAA 30 2.5286772E-6 44.0 11 ATAACGC 20 7.857904E-4 44.0 12 TCGACGT 20 7.857904E-4 44.0 15 TCGAACG 20 7.857904E-4 44.0 11 CGGAGGG 206505 0.0 42.036564 3 TGCGGAG 210870 0.0 42.02608 1 GCGGAGG 210205 0.0 41.952858 2 GAGGGAT 22490 0.0 41.78924 5 GAGGGGA 31190 0.0 41.637066 5 AGGGATT 7725 0.0 41.60777 6 GGAGGGG 119275 0.0 41.36055 4 GGAGGGA 68230 0.0 41.278618 4 GAGGGGT 22005 0.0 41.030678 5 AGGGGGG 24770 0.0 40.74041 6 GAGGGGG 48700 0.0 40.72033 5 CTATCGA 65 0.0 40.615387 38 AGGGATA 2230 0.0 40.547085 6 AGGGATC 6795 0.0 40.438557 6 AGGGGAG 14195 0.0 40.38887 6 AGGGATG 6270 0.0 40.385963 6 >>END_MODULE