##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527721_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3119642 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96558996192512 31.0 31.0 34.0 31.0 34.0 2 32.48316922262234 34.0 31.0 34.0 31.0 34.0 3 32.8149169039268 34.0 31.0 34.0 31.0 34.0 4 36.35049758914645 37.0 37.0 37.0 35.0 37.0 5 36.31067378885141 37.0 37.0 37.0 35.0 37.0 6 34.8567527940706 35.0 35.0 37.0 31.0 37.0 7 36.127234150585224 37.0 35.0 37.0 35.0 37.0 8 36.51684456101053 37.0 37.0 37.0 35.0 37.0 9 38.5991216299819 39.0 39.0 39.0 37.0 39.0 10 37.760691451134456 39.0 38.0 39.0 35.0 39.0 11 37.37743048721616 39.0 37.0 39.0 35.0 39.0 12 36.81775793504511 39.0 35.0 39.0 33.0 39.0 13 36.56158046339932 39.0 35.0 39.0 33.0 39.0 14 37.2901749623835 40.0 36.0 40.0 33.0 40.0 15 37.392454326490025 40.0 36.0 40.0 33.0 40.0 16 37.523691179949495 40.0 36.0 40.0 33.0 40.0 17 37.43535764680691 40.0 36.0 40.0 33.0 40.0 18 37.24951837422371 40.0 36.0 40.0 32.0 40.0 19 37.31304361205549 40.0 36.0 40.0 32.0 40.0 20 37.25943617889489 39.0 36.0 40.0 32.0 40.0 21 37.32614255097219 39.0 36.0 40.0 33.0 40.0 22 37.20886627375833 39.0 36.0 40.0 32.0 40.0 23 37.13847967170592 39.0 35.0 40.0 32.0 40.0 24 37.09742271709382 39.0 35.0 40.0 32.0 40.0 25 37.03558613456288 39.0 35.0 40.0 32.0 40.0 26 36.83263079545666 39.0 35.0 40.0 32.0 40.0 27 36.69852149701793 39.0 35.0 40.0 31.0 40.0 28 36.594110157511665 38.0 35.0 40.0 31.0 40.0 29 36.53690038792913 38.0 35.0 40.0 31.0 40.0 30 36.31920297264878 38.0 35.0 40.0 31.0 40.0 31 36.19435210835089 38.0 35.0 40.0 30.0 40.0 32 36.08827551366471 38.0 35.0 40.0 30.0 40.0 33 35.78270936216399 38.0 35.0 40.0 30.0 40.0 34 35.561926977518574 38.0 34.0 40.0 28.0 40.0 35 35.465730683200185 38.0 34.0 40.0 28.0 40.0 36 35.408744336689914 38.0 34.0 40.0 28.0 40.0 37 35.41764952516988 38.0 34.0 40.0 29.0 40.0 38 35.06666630337712 37.0 34.0 40.0 28.0 40.0 39 35.11781928823884 37.0 34.0 40.0 28.0 40.0 40 34.92140893089656 37.0 34.0 40.0 27.0 40.0 41 34.54823886843426 36.0 33.0 40.0 26.0 40.0 42 34.61868477216296 36.0 33.0 39.0 27.0 40.0 43 34.59373799942429 36.0 33.0 39.0 27.0 40.0 44 34.43931963988175 36.0 33.0 39.0 27.0 40.0 45 34.28030395795415 35.0 33.0 39.0 26.0 40.0 46 33.8993660169981 35.0 33.0 39.0 25.0 40.0 47 33.5911742437113 35.0 32.0 39.0 23.0 40.0 48 33.53738185343062 35.0 32.0 38.0 24.0 40.0 49 33.540128322416486 35.0 32.0 38.0 25.0 40.0 50 33.3456313256457 35.0 32.0 38.0 24.0 40.0 51 33.85742370438659 35.0 33.0 39.0 26.0 40.0 52 33.67647056937943 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 3.0 13 3.0 14 9.0 15 30.0 16 93.0 17 292.0 18 653.0 19 1389.0 20 2485.0 21 4519.0 22 7139.0 23 10577.0 24 15415.0 25 21159.0 26 28044.0 27 35177.0 28 44330.0 29 55718.0 30 70849.0 31 91150.0 32 120189.0 33 173846.0 34 297608.0 35 286832.0 36 394966.0 37 547170.0 38 774477.0 39 135516.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.46727861722596 0.43899267928820035 0.0420561077200525 0.051672595765796206 8 99.51766901458565 0.3694654707174734 0.05157643088533877 0.06128908381153992 9 98.31368471125853 0.9938640395276125 0.31320901564987264 0.37924223356397946 10 56.96118336655296 31.804803243449086 4.818405445240191 6.415607944757763 11 36.950073117364106 22.738987358164813 23.61613928777725 16.694800236693826 12 33.82317586441008 15.268546839669423 25.292517538871444 25.615759757049045 13 27.228380692399963 16.234106349382397 29.293457390303118 27.244055567914522 14 26.59439769050423 18.26177490878761 30.452532694456607 24.69129470625155 15 26.935398356606306 19.265800370683557 28.728072003133693 25.070729269576447 16 35.68169039909066 20.783698898783896 22.89435775002388 20.640252952101555 17 32.62201239757639 20.461899153813164 23.46766071235097 23.448427736259482 18 30.54898606955542 20.536939815530115 25.025339446000533 23.888734668913933 19 32.1010551851783 21.972072436516754 23.006229560956033 22.920642817348913 20 31.24143731876927 23.194007517529254 23.57395496021659 21.990600203484885 21 32.11733910493576 21.727300760792424 24.569549967592437 21.58581016667938 22 29.093274164150884 20.956571298886217 26.56182985098931 23.388324685973583 23 29.55550668954963 21.98015028647518 25.638679053558068 22.825663970417118 24 30.465450843398056 22.003005473063897 23.98605352793686 23.545490155601186 25 29.05269258459785 23.300782589797162 21.94530654478943 25.701218280815556 26 26.19300547947489 22.878554654668708 24.403280889281525 26.525158976574875 27 25.440675564696207 20.649709165346536 25.518440898026117 28.39117437193114 28 26.744062299456157 22.879676578274047 23.123807154795326 27.252453967474473 29 29.458444270207927 22.809347995699504 22.54858089485909 25.183626839233476 30 29.143824836311342 21.100433960050545 25.629383115113853 24.12635808852426 31 30.627648941769603 21.727461035593187 23.636878846995906 24.008011175641307 32 32.61239590953065 21.833370623936975 23.57321769613308 21.981015770399296 33 33.00994152534169 21.622705425814885 22.88749798855125 22.479855060292174 34 29.16286548264192 22.16558823095727 27.21325075120799 21.45829553519282 35 26.571189899353836 26.052444479206265 26.79349104801128 20.582874573428615 36 27.50389307491052 26.545417711391245 24.29249894699456 21.65819026670368 37 29.190432748373052 26.773296423115216 21.755412960846147 22.280857867665585 38 29.281244450485023 26.13703751904866 22.12638501469079 22.455333015775526 39 29.46145743646226 23.796512548555253 22.493189923715605 24.24884009126688 40 27.68497154481187 23.56231900968124 22.451646695357994 26.301062750148894 41 25.07803780049121 25.108938782078198 23.51138367799895 26.301639739431643 42 24.225696410036793 23.826868595819647 23.672331632924546 28.27510336121901 43 24.790536862883624 22.170300310099684 24.665073748846822 28.374089078169867 44 25.68422915193474 22.027142858058713 24.309231636194152 27.97939635381239 45 27.711096337336144 21.89975644641276 23.356878770064 27.032268446187096 46 26.775283830644668 25.083262758996067 22.989496871756437 25.151956538602825 47 24.949273025558703 24.576730278666588 24.7048860093562 25.769110686418507 48 25.161861521289943 23.287992660696325 26.598051955961616 24.95209386205212 49 28.14463967339842 22.533899723109254 25.532256585851837 23.789204017640486 50 25.708174207168643 22.800244387016203 24.74883335972525 26.742748046089904 51 24.13411538888116 23.28132522898461 26.24987097878539 26.334688403348842 52 24.58602621711081 23.4357339720391 25.586782073071205 26.391457737778882 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 30.0 8 60.0 9 41.5 10 23.0 11 169.0 12 315.0 13 497.5 14 2389.5 15 4099.0 16 5963.5 17 7828.0 18 7403.5 19 6979.0 20 6815.5 21 6652.0 22 6622.5 23 6593.0 24 7083.0 25 7573.0 26 9030.0 27 10487.0 28 10903.0 29 11319.0 30 14593.5 31 17868.0 32 19837.5 33 21807.0 34 26460.5 35 31114.0 36 38655.0 37 46196.0 38 50751.0 39 58947.0 40 62588.0 41 68662.0 42 74736.0 43 78412.0 44 82088.0 45 90131.0 46 98174.0 47 103108.0 48 108042.0 49 115793.5 50 123545.0 51 129817.5 52 136090.0 53 145411.0 54 154732.0 55 162853.5 56 170975.0 57 179309.0 58 187643.0 59 210331.5 60 233020.0 61 244036.0 62 255052.0 63 261413.5 64 284728.5 65 301682.0 66 255637.5 67 209593.0 68 176498.0 69 143403.0 70 116532.0 71 89661.0 72 78691.0 73 67721.0 74 56966.5 75 46212.0 76 43232.0 77 40252.0 78 29518.0 79 18784.0 80 13259.0 81 7734.0 82 5717.5 83 3701.0 84 2374.5 85 1048.0 86 688.0 87 328.0 88 223.5 89 71.5 90 24.0 91 18.0 92 12.0 93 9.5 94 7.0 95 4.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3119642.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.194255122031878 #Duplication Level Percentage of deduplicated Percentage of total 1 67.48214531182046 5.529659148670843 2 10.073255906149186 1.650856576090017 3 4.26380423769628 1.0481609914225192 4 2.208985033558496 0.7240394770291387 5 1.2504910088960641 0.5123421177350692 6 0.7703041471027893 0.37872412217516566 7 0.5174673704831005 0.296818175574586 8 0.3586247327757627 0.23509300427480856 9 0.3001814247104493 0.22137868592751828 >10 5.528628691209166 12.948889455226793 >50 4.44836810519079 26.049148766884823 >100 2.692045105258063 37.914744149887916 >500 0.07784029371465936 4.292449912552762 >1k 0.0241714596271837 4.076758190255056 >5k 0.00204842878196472 1.2747129007573803 >10k+ 0.0016387430255717763 2.8462243255356188 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 38759 1.242418200549935 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 22214 0.7120688848271692 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 13394 0.42934413628230417 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 10416 0.33388446494822166 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9047 0.29000122449947785 No Hit TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 8056 0.2582347589883711 No Hit TGCGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7754 0.24855416102232245 No Hit TGCGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 7382 0.23662971584560025 No Hit TGCGGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 5732 0.18373903159400984 No Hit TGCGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4690 0.15033776311512667 No Hit TGCGGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4628 0.14835035558567297 No Hit TGCGGAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 4550 0.14585006869377962 No Hit TGCGGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 4324 0.13860564769931935 No Hit TGCGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3885 0.12453352019238105 No Hit TGCGGAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 3822 0.12251405770277488 No Hit TGCGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAA 3738 0.11982144104996663 No Hit TGCGGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3641 0.11671210991517617 No Hit TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 3604 0.11552607638953442 No Hit TGCGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3576 0.11462853750526503 No Hit TGCGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3292 0.10552492882196098 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.01897653641026759 0.0 0.0 0.0 0.0 7 0.019104756250877503 0.0 0.0 0.0 0.0 8 0.027823705412351803 0.0 0.0 0.0 0.0 9 0.029779057981653024 0.0 0.0 0.0 0.0 10 0.04551804341652023 0.0 0.0 0.0 0.0 11 0.05869263203918911 0.0 0.0 0.0 0.0 12 0.06805268040371298 0.0 0.0 0.0 0.0 13 0.0762908051629001 0.0 0.0 0.0 0.0 14 0.0842404352807149 0.0 0.0 0.0 0.0 15 0.09453007748966068 0.0 0.0 0.0 0.0 16 0.10408245561509942 0.0 0.0 0.0 0.0 17 0.11369894366084314 0.0 0.0 0.0 0.0 18 0.12257816762307983 0.0 0.0 0.0 0.0 19 0.13437439295919212 0.0 0.0 0.0 0.0 20 0.14527307941103498 0.0 0.0 0.0 0.0 21 0.15450490793494895 0.0 0.0 0.0 0.0 22 0.16277508765428852 0.0 0.0 0.0 0.0 23 0.17194280625789754 0.0 0.0 0.0 0.0 24 0.18127079966226894 0.0 0.0 0.0 0.0 25 0.18966919922221845 0.0 0.0 0.0 0.0 26 0.19842020334384522 0.0 0.0 0.0 0.0 27 0.20678654794364226 0.0 0.0 0.0 0.0 28 0.2178775641564 0.0 0.0 0.0 0.0 29 0.22650034843741687 0.0 0.0 0.0 0.0 30 0.23518724263873866 0.0 0.0 0.0 0.0 31 0.24384208187990802 0.0 0.0 0.0 0.0 32 0.2547407683317509 0.0 0.0 0.0 0.0 33 0.2632673877323103 0.0 0.0 0.0 0.0 34 0.27265949105698667 0.0 0.0 0.0 0.0 35 0.28461599119386133 0.0 0.0 0.0 0.0 36 0.29807907445790255 0.0 0.0 0.0 0.0 37 0.31077283867828426 0.0 0.0 0.0 0.0 38 0.320325216803723 0.0 0.0 0.0 0.0 39 0.33023019949083904 0.0 0.0 0.0 0.0 40 0.3412891607434443 0.0 0.0 0.0 3.205496015247904E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 20 6.3131255E-4 46.000004 24 CGATAGG 35 1.0203257E-7 46.000004 41 AACGCGT 25 3.4185126E-5 46.0 43 GAGGGAT 34155 0.0 43.535355 5 TGCGGAG 328330 0.0 43.47254 1 CGGAGGG 321850 0.0 43.449528 3 AGGGATT 11590 0.0 43.3805 6 GCGGAGG 327705 0.0 43.36806 2 GGAGGGA 105160 0.0 42.780525 4 GAGGGGA 47370 0.0 42.683765 5 GAGGGGT 34200 0.0 42.617252 5 GGAGGGG 187040 0.0 42.54459 4 AGGGATG 9795 0.0 41.984688 6 AGGGATC 10455 0.0 41.600193 6 GAGGGGG 76135 0.0 41.598476 5 AGGGGTG 13690 0.0 41.363037 6 AGGGGGG 37890 0.0 41.28345 6 AGGGAGT 9160 0.0 41.279476 6 AGGGGAT 8405 0.0 41.101723 6 GAGGGGC 31900 0.0 41.09718 5 >>END_MODULE