##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527718_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 347589 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.978324975761602 33.0 31.0 34.0 30.0 34.0 2 32.14906110377486 34.0 31.0 34.0 30.0 34.0 3 32.21922442885131 34.0 31.0 34.0 30.0 34.0 4 36.028110786014516 37.0 35.0 37.0 35.0 37.0 5 35.95668735201632 37.0 35.0 37.0 35.0 37.0 6 35.94606273501175 37.0 35.0 37.0 35.0 37.0 7 36.42272338882991 37.0 36.0 37.0 35.0 37.0 8 36.53967473078838 37.0 37.0 37.0 35.0 37.0 9 38.51408128565634 39.0 39.0 39.0 37.0 39.0 10 37.71173138390456 39.0 38.0 39.0 35.0 39.0 11 37.39384733118712 39.0 37.0 39.0 34.0 39.0 12 37.19302969886849 39.0 37.0 39.0 34.0 39.0 13 36.79677722827822 39.0 37.0 39.0 33.0 39.0 14 37.75272232435434 40.0 37.0 40.0 33.0 40.0 15 37.84000932135367 40.0 37.0 40.0 33.0 40.0 16 37.87482054955709 40.0 38.0 40.0 33.0 40.0 17 38.02276251549963 40.0 38.0 40.0 34.0 40.0 18 37.97396350287264 40.0 38.0 40.0 34.0 40.0 19 37.90715471433216 40.0 38.0 40.0 34.0 40.0 20 38.05734934074439 40.0 38.0 40.0 34.0 40.0 21 38.09829712677904 40.0 38.0 40.0 34.0 40.0 22 38.027411684489444 40.0 38.0 40.0 34.0 40.0 23 37.94082091205418 40.0 38.0 40.0 34.0 40.0 24 37.82350419604763 40.0 38.0 40.0 34.0 40.0 25 37.6206007669978 40.0 37.0 40.0 33.0 40.0 26 37.228073960913605 40.0 36.0 40.0 33.0 40.0 27 37.10539746654813 40.0 35.0 40.0 33.0 40.0 28 37.038418937308144 40.0 35.0 40.0 32.0 40.0 29 36.94406612407182 39.0 35.0 40.0 32.0 40.0 30 36.66529435626559 39.0 35.0 40.0 31.0 40.0 31 36.6096942078144 39.0 35.0 40.0 31.0 40.0 32 36.38096717675185 39.0 35.0 40.0 30.0 40.0 33 36.03309080552031 39.0 35.0 40.0 30.0 40.0 34 35.94362019511549 39.0 35.0 40.0 30.0 40.0 35 35.83521630431343 39.0 35.0 40.0 29.0 40.0 36 35.49077214756508 39.0 35.0 40.0 26.0 40.0 37 35.14936318468076 39.0 35.0 40.0 24.0 40.0 38 34.70416785341308 38.0 35.0 40.0 21.0 40.0 39 34.59164703140778 38.0 34.0 40.0 21.0 40.0 40 34.25675150824681 38.0 34.0 40.0 18.0 40.0 41 33.80456516172836 38.0 33.0 40.0 15.0 40.0 42 33.63869685174157 37.0 33.0 40.0 16.0 40.0 43 33.465236241653216 37.0 33.0 40.0 15.0 40.0 44 33.19281392679285 37.0 33.0 40.0 15.0 40.0 45 32.96746732491535 36.0 33.0 40.0 13.0 40.0 46 32.636642701581465 35.0 32.0 40.0 11.0 40.0 47 32.32772038240566 35.0 32.0 40.0 10.0 40.0 48 32.2176018228425 35.0 31.0 39.0 10.0 40.0 49 31.995310553556067 35.0 31.0 39.0 10.0 40.0 50 31.534890344631158 35.0 30.0 39.0 10.0 40.0 51 31.516161328465515 35.0 30.0 39.0 9.0 40.0 52 31.073900497426557 35.0 29.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 1.0 15 5.0 16 20.0 17 53.0 18 113.0 19 244.0 20 403.0 21 761.0 22 1245.0 23 1986.0 24 2971.0 25 4152.0 26 5604.0 27 7435.0 28 8768.0 29 8924.0 30 8499.0 31 9053.0 32 10845.0 33 13536.0 34 19385.0 35 25103.0 36 37933.0 37 59370.0 38 86804.0 39 34373.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 99.27241656093835 0.5877631340462443 0.10299520410599874 0.036825100909407375 8 97.2504883641312 2.075727367666986 0.46923234049408924 0.2045519277077238 9 94.70725483257525 3.3835938421526572 1.1234532738377796 0.7856980514343088 10 47.50179090822782 36.98592302978518 5.607772397860692 9.904513664126311 11 28.52017756603345 37.04432533825869 18.22123254763528 16.21426454807258 12 37.28311310196813 24.786745265241418 21.139334098604962 16.79080753418549 13 24.854929241143996 27.99340600536841 24.500199948790094 22.6514648046975 14 27.755481329961533 31.369519748898846 20.790358728268153 20.08464019287147 15 25.7099620528843 32.34854958010754 20.946002318830573 20.99548604817759 16 26.508894124957926 31.220780864756943 25.517493361412473 16.75283164887266 17 30.736012934816692 29.34011145346947 20.555023317768974 19.36885229394486 18 28.495148005259086 30.017635770982398 23.364663438716416 18.122552785042103 19 25.998521242041605 28.882099260908717 25.062645825961123 20.056733671088555 20 26.012906047084343 28.885551614118977 23.995868683991723 21.105673654804956 21 22.898020363130016 27.39787507659909 29.269625908760062 20.434478651510837 22 23.07207650414714 31.782939045827113 23.4575892792925 21.68739517073325 23 22.10628069357776 35.68122121240891 23.163563864218947 19.048934229794384 24 21.51938064783408 34.59372995117797 24.371599791708025 19.515289609279925 25 22.697208484733405 30.974800698526135 23.028922089018927 23.299068727721533 26 26.26406474313054 31.904634496488672 20.351046782262962 21.480253978117837 27 23.95616662207377 32.824974323122994 21.099056644485298 22.11980241031793 28 29.365141014243832 31.48632436584587 19.71869075258423 19.429843867326067 29 31.056794087269736 32.19204290124256 19.114241244688408 17.636921766799293 30 29.14102575167799 34.679751085333535 19.455161124201283 16.72406203878719 31 28.553838009833456 33.27982185857435 19.001176677052495 19.165163454539698 32 24.82299497394912 36.36622562854406 20.639318275319415 18.17146112218741 33 27.389244193573443 36.40305072945346 19.342959644867932 16.864745432105156 34 24.423385089861878 37.67869524064341 17.648429610833485 20.249490058661234 35 23.59223105449252 42.12446308715178 18.583441938611404 15.699863919744296 36 24.98870792804145 39.21182776209834 18.496270020052417 17.30319428980779 37 22.92161144340011 40.68195483746609 19.008081383473012 17.388352335660795 38 25.31380452200731 39.52570420813087 18.264962354965203 16.895528914896616 39 23.242680291954006 37.83174956629813 17.97122463599251 20.954345505755363 40 23.200388965128354 39.71069280098047 19.923242680291953 17.165675553599222 41 22.922474531702672 39.740037803267654 20.574011260425387 16.763476404604287 42 23.071788808046286 39.91754629749503 19.068497564652507 17.942167329806182 43 22.202083495162388 40.232573527930974 20.376364039138178 17.188978937768457 44 22.18079398369914 38.30472195610333 21.52714844255716 17.987335617640372 45 20.11398519515865 38.898526708267525 19.59498142921669 21.392506667357136 46 21.436524170787912 40.554793160888295 19.35734444991067 18.651338218413127 47 23.596834192106193 38.445117653320445 19.678413298464566 18.279634856108796 48 23.718529642767752 37.594112586992104 19.684167220481662 19.00319054975848 49 23.32841373000872 38.31450362353239 20.147070246756947 18.210012399701945 50 20.78920794386474 41.037547218122555 20.199718633213365 17.97352620479935 51 20.54207699323051 40.39483412881305 20.068816907324454 18.99427197063198 52 22.14511966719315 37.57483694823484 20.36514389120484 19.914899493367166 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 17.0 4 34.0 5 68.0 6 102.0 7 124.0 8 146.0 9 915.5 10 1685.0 11 2211.5 12 2738.0 13 2560.5 14 2044.5 15 1706.0 16 1598.5 17 1491.0 18 1408.5 19 1326.0 20 1614.0 21 1902.0 22 2548.5 23 3195.0 24 4157.5 25 5120.0 26 5967.0 27 6814.0 28 8747.5 29 10681.0 30 12068.5 31 13456.0 32 14266.0 33 15076.0 34 14524.0 35 13972.0 36 14781.5 37 15591.0 38 14230.0 39 13019.5 40 13170.0 41 13647.5 42 14125.0 43 13901.0 44 13677.0 45 14069.5 46 14462.0 47 15513.0 48 16564.0 49 16865.5 50 17167.0 51 20764.0 52 24361.0 53 25317.0 54 26273.0 55 24416.5 56 22560.0 57 20469.0 58 18378.0 59 17043.5 60 15709.0 61 14111.5 62 12514.0 63 10943.5 64 7600.5 65 5828.0 66 5621.0 67 5414.0 68 4328.5 69 3243.0 70 2648.5 71 2054.0 72 1632.5 73 1211.0 74 1078.5 75 946.0 76 522.5 77 99.0 78 105.0 79 111.0 80 80.0 81 49.0 82 29.0 83 9.0 84 6.0 85 3.0 86 2.5 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 347589.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.4489730024392 #Duplication Level Percentage of deduplicated Percentage of total 1 78.50688389905483 23.11947104448894 2 9.087547335169374 5.352378722635824 3 3.596041814782627 3.1769921495752813 4 1.9115024567933625 2.2516713697681574 5 1.10105355559486 1.6212448216476363 6 0.7853192282137113 1.3876106849977183 7 0.5605137145606434 1.1554587273315309 8 0.41763764176892354 0.9839199709804323 9 0.34470092222111975 0.9135979337165083 >10 2.427893450541051 15.533812972667885 >50 0.7983073526610855 16.64278257320303 >100 0.4426159664941939 22.240887009632512 >500 0.01198959728652444 2.1537960934859566 >1k 0.00799306485768296 3.4663759258685864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGATCAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTGATCAGGGAAG 2515 0.723555693649684 No Hit TGATCAGGGGAAGGCAGTTTTAACTTTTTCAAAGATTGCAAACTTCTTGTAG 1752 0.5040435686975134 No Hit TGATCAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1696 0.4879325870496477 No Hit TGATCAGGGGAGTGCAGTGCTTAATCAGGGAAAAAAAAAAAAAAAAAAAAAA 1379 0.3967329230786935 No Hit TGATCAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1131 0.32538429006671676 No Hit TGATCAGGGAGTGCAGTGCTTAATCAGGGAAAAAAAAAAAAAAAAAAAAAAA 1128 0.3245212017641525 No Hit TGATCAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1120 0.32221963295731454 No Hit TGATCAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1060 0.30495786690602983 No Hit TGATCAGGGGAGTGCAGTGCTTGATCAGGGAAAAAAAAAAAAAAAAAAAAAA 851 0.2448293818273881 No Hit TGATCAGGGGAGTGCAGTGCTTAATCAGGGGAAAAAAAAAAAAAAAAAAAAA 768 0.22095060545644424 No Hit TGATCAGGGGCCCGTCTGCCCCAGCCCAGACACCGAAGCTACTCTCCTTCCA 648 0.18642707335387482 No Hit TGATCAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 620 0.17837158252994198 No Hit TGATCAGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 594 0.1708914839077186 No Hit TGATCAGGGCAGAGTGCAGTGCTTAATCAGGGAAAAAAAAAAAAAAAAAAAA 593 0.17060378780686386 No Hit TGATCAGGGGAGTCCAGAGCCTGCAACCTACTTCCTTCTAGCTGCAGCCACT 587 0.1688776112017354 No Hit TGATCAGGGGTGCAGTGCTTAATCAGGGAAAAAAAAAAAAAAAAAAAAAAAA 569 0.16369908138634998 No Hit TGATCAGGGAGTGCAGTGCTTAATCAGGGGAAAAAAAAAAAAAAAAAAAAAA 561 0.16139751257951201 No Hit TGATCAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 512 0.1473004036376295 Illumina Single End Adapter 2 (100% over 34bp) TGATCAGGGGGCGCCAGTCCTCCGATAGACTGAGTCGCCCGGGTACCCGTGT 509 0.14643731533506527 No Hit TGATCAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATT 508 0.14614961923421052 No Hit TGATCAGGGAGCCGACTTAGAACTGGTGCGGACCAGGGGAATCCGACTGTTT 484 0.13924491281369664 No Hit TGATCAGGGGAGTGCAGTGCTTAATCAGGGGGAAAAAAAAAAAAAAAAAAAA 470 0.1352171674017302 No Hit TGATCAGGGGACACCACCCACCCAGAGTGGAGAAGCCCAGCCAGTCGCTGTC 464 0.13349099079660173 No Hit TGATCAGGGGCAGTGCATCGTGGGTGAGAACGAGCGGAGCAGGTTTGGCGTT 454 0.13061402978805428 No Hit TGATCAGGGATTAAGAGCCTTGTCTGTTTAGTGCTGTGGATGGCTCCCAGAT 452 0.1300386375863448 No Hit TGATCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 447 0.12860015708207106 Illumina Single End Adapter 2 (100% over 34bp) TGATCAGGGGATCGAGCATCGGTCGGAGCTGCTGCCAGCCAACTCTCGAAGC 423 0.1216954506615572 No Hit TGATCAGGGAGAGTGCAGTGCTTGATCAGGGAAGTAATTTACACCGGAAACA 420 0.12083236235899296 No Hit TGATCAGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 420 0.12083236235899296 Illumina Single End Adapter 2 (97% over 34bp) TGATCAGGGAGAGTGCAGTGCTTAATCAGGGAAAAAAAAAAAAAAAAAAAAA 410 0.1179554013504455 No Hit TGATCAGGGAGTGCAGTGCTTGATCAGGGAAAAAAAAAAAAAAAAAAAAAAA 410 0.1179554013504455 No Hit TGATCAGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 403 0.11594152864446228 Illumina Single End Adapter 2 (100% over 34bp) TGATCAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 389 0.11191378323249586 No Hit TGATCAGGGGAGTGCAGTGCTTGATCGGAAGAGCTCGTATGCCGTCTTCTGC 380 0.10932451832480314 Illumina Single End Adapter 2 (96% over 31bp) TGATCAGGGAGCAGACCGTAACCATTATAGACGCTATCCACGTCGTAGGGGT 380 0.10932451832480314 No Hit TGATCAGGGGTGCAGTGCTTAATCAGGGGAAAAAAAAAAAAAAAAAAAAAAA 376 0.10817373392138416 No Hit TGATCAGGGATTAGTTTGTGACTCTCTTGAGGGCAAGGGTGAGGTAGGGTCA 371 0.10673525341711045 No Hit TGATCAGGGGGTACAGTGAAACTGCAAATGGCTGAGGACATTCTGTATCCCG 368 0.10587216511454621 No Hit TGATCAGGGGAGACAGAGGACTGGCCATTCAAGGTCACTGTCAGACCCTGAG 366 0.10529677291283672 No Hit TGATCAGGGCAGAGTGCAGTGCTTAATCAGGGGAAAAAAAAAAAAAAAAAAA 355 0.10213211580343451 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.4030622372974979 0.0 0.0 0.0 0.0 7 0.471821605401782 0.0 0.0 0.0 0.0 8 0.5161268049334128 0.0 0.0 0.0 0.0 9 0.5929416638616297 0.0 0.0 0.0 0.0 10 0.8207969757385878 0.0 0.0 0.0 0.0 11 1.164881512360863 0.0 0.0 0.0 0.0 12 1.2865769630224202 0.0 0.0 0.0 0.0 13 1.3619533414463634 0.0 0.0 0.0 0.0 14 1.4894027141250155 0.0 0.0 0.0 0.0 15 1.6562664526207675 0.0 0.0 0.0 0.0 16 1.7871681785096767 0.0 0.0 0.0 0.0 17 1.900808138347301 0.0 0.0 0.0 0.0 18 2.008981872268685 0.0 0.0 0.0 0.0 19 2.1148540373832314 0.0 0.0 0.0 0.0 20 2.227343212817437 0.0 0.0 0.0 0.0 21 2.3300507208225807 0.0 0.0 0.0 0.0 22 2.4577877896020874 0.0 0.0 0.0 0.0 23 2.5884018193901417 0.0 0.0 0.0 0.0 24 2.730523693212386 0.0 0.0 0.0 0.0 25 2.860562330798731 0.0 0.0 0.0 0.0 26 3.0167813135628574 0.0 0.0 0.0 0.0 27 3.1778911300415147 0.0 0.0 0.0 0.0 28 3.353673447663764 0.0 0.0 0.0 0.0 29 3.4644364464928405 0.0 0.0 0.0 0.0 30 3.6010920943988447 0.0 0.0 0.0 0.0 31 3.7003472491937317 0.0 0.0 0.0 0.0 32 3.826645837468965 0.0 0.0 0.0 0.0 33 3.9397104051048797 0.0 0.0 0.0 0.0 34 4.051336492236521 0.0 0.0 0.0 0.0 35 4.217624838530563 0.0 0.0 0.0 0.0 36 4.321483130939126 0.0 0.0 0.0 0.0 37 4.441452404995555 0.0 0.0 0.0 0.0 38 4.5605585907494195 0.0 0.0 0.0 0.0 39 4.688007963428071 0.0 0.0 0.0 0.0 40 4.817758904913561 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCACAAC 25 3.412203E-5 46.0 13 TCACGCG 20 6.3053484E-4 46.0 14 TCACGAC 30 1.8576302E-6 46.0 42 TCTGCGA 20 6.3053484E-4 46.0 15 CTTGTAG 240 0.0 46.0 46 TCGCCCG 65 0.0 46.0 35 TCGCCCC 50 1.6370905E-11 46.0 43 ATTTACG 20 6.3053484E-4 46.0 23 CGGGTTA 20 6.3053484E-4 46.0 41 ATCCTCT 25 3.412203E-5 46.0 37 AGGTATT 30 1.8576302E-6 46.0 40 CTATGGG 40 5.5915734E-9 46.0 35 CGGGTAC 65 0.0 46.0 40 AGCGTAT 20 6.3053484E-4 46.0 38 CGTGGAA 30 1.8576302E-6 46.0 31 AGACTAG 25 3.412203E-5 46.0 33 CGGCGGA 25 3.412203E-5 46.0 29 GATACCG 25 3.412203E-5 46.0 19 GTCGCGA 25 3.412203E-5 46.0 20 TCGTTAT 20 6.3053484E-4 46.0 42 >>END_MODULE