##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527711_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1568086 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5956879916025 34.0 31.0 34.0 31.0 34.0 2 33.02842956317447 34.0 31.0 34.0 31.0 34.0 3 33.13501045223285 34.0 33.0 34.0 31.0 34.0 4 36.390008583712884 37.0 37.0 37.0 35.0 37.0 5 36.45919228919843 37.0 37.0 37.0 35.0 37.0 6 36.42361069482158 37.0 37.0 37.0 35.0 37.0 7 36.55960451148725 37.0 37.0 37.0 35.0 37.0 8 36.696868028921884 37.0 37.0 37.0 35.0 37.0 9 38.766436279642825 39.0 39.0 39.0 39.0 39.0 10 38.298018093395385 39.0 39.0 39.0 37.0 39.0 11 38.090393639124386 39.0 39.0 39.0 37.0 39.0 12 37.69295752911511 39.0 37.0 39.0 35.0 39.0 13 37.57271093549716 39.0 37.0 39.0 35.0 39.0 14 38.357375807194245 40.0 38.0 40.0 35.0 40.0 15 38.40968416273087 40.0 38.0 40.0 35.0 40.0 16 38.44270849940628 40.0 38.0 40.0 35.0 40.0 17 38.367866940971346 40.0 38.0 40.0 35.0 40.0 18 38.27814928517951 40.0 38.0 40.0 34.0 40.0 19 38.30572430338642 40.0 38.0 40.0 34.0 40.0 20 38.209652404268645 40.0 38.0 40.0 34.0 40.0 21 38.21041447981807 40.0 38.0 40.0 34.0 40.0 22 38.261921221157515 40.0 38.0 40.0 34.0 40.0 23 38.21730887208992 40.0 38.0 40.0 35.0 40.0 24 38.15322437672424 40.0 38.0 40.0 35.0 40.0 25 38.09947604914527 40.0 38.0 40.0 35.0 40.0 26 37.98571889551976 40.0 38.0 40.0 34.0 40.0 27 37.85966586016328 40.0 37.0 40.0 34.0 40.0 28 37.72394626315138 40.0 37.0 40.0 34.0 40.0 29 37.730813871177986 40.0 37.0 40.0 34.0 40.0 30 37.8404564545567 40.0 37.0 40.0 34.0 40.0 31 37.82627355897572 40.0 37.0 40.0 34.0 40.0 32 37.815545831032225 40.0 37.0 40.0 34.0 40.0 33 37.68330308414207 40.0 37.0 40.0 34.0 40.0 34 37.344894348906884 40.0 36.0 40.0 33.0 40.0 35 37.29209622431423 40.0 36.0 40.0 33.0 40.0 36 37.27185243666482 40.0 36.0 40.0 33.0 40.0 37 37.18958909141463 40.0 35.0 40.0 33.0 40.0 38 37.08715338316904 40.0 35.0 40.0 33.0 40.0 39 36.95463450346473 40.0 35.0 40.0 33.0 40.0 40 36.73121244625614 40.0 35.0 40.0 32.0 40.0 41 36.604831622755384 40.0 35.0 40.0 32.0 40.0 42 36.51776943356423 39.0 35.0 40.0 32.0 40.0 43 36.37345209382649 39.0 35.0 40.0 31.0 40.0 44 36.09919736545062 39.0 35.0 40.0 31.0 40.0 45 36.04131342286074 39.0 35.0 40.0 30.0 40.0 46 35.908522874383166 39.0 35.0 40.0 30.0 40.0 47 35.796771988271054 38.0 35.0 40.0 30.0 40.0 48 35.70110376599243 38.0 35.0 40.0 30.0 40.0 49 35.58209243625669 37.0 35.0 40.0 30.0 40.0 50 35.04452243052996 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 3.0 14 5.0 15 14.0 16 37.0 17 99.0 18 202.0 19 405.0 20 647.0 21 1031.0 22 1728.0 23 2647.0 24 4009.0 25 5688.0 26 7671.0 27 10029.0 28 13334.0 29 16634.0 30 19992.0 31 24527.0 32 30477.0 33 39954.0 34 83320.0 35 111491.0 36 113313.0 37 216172.0 38 488379.0 39 376274.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.64651173468802 0.27402833773147645 0.05446129867877145 0.024998628901731153 8 99.12319860007678 0.7828652255042133 0.06817228136722094 0.025763893051784153 9 98.39045817640104 0.8648760335848927 0.3151612857968249 0.42950450421724323 10 57.42433769576414 31.659296747754905 4.059981404081154 6.856384152399804 11 34.68725567347709 25.240898777235433 21.963081106520942 18.10876444276653 12 32.12260041859949 18.056216304462893 26.616907491043225 23.204275785894396 13 24.21327656773927 18.15869792855749 29.9754605295883 27.65256497411494 14 25.822180671213186 19.63699695042236 29.649904405753258 24.890917972611195 15 26.089768035681715 18.901705646246445 28.447164249919965 26.561362068151873 16 29.901484995083177 21.028757351318742 25.42743191381085 23.642325739787232 17 31.028527772073726 20.760787354775186 23.092929852061687 25.117755021089405 18 28.29066773123413 21.848737888100526 25.041292378096607 24.819302002568737 19 29.139026813580376 21.492316110213345 23.539461483617607 25.829195592588672 20 27.954142821248322 22.576376550775915 24.34483822953588 25.124642398439885 21 29.43709720002602 21.31496614343856 26.187084126763455 23.060852529771964 22 27.682091415904488 20.5819706317128 25.965412611298106 25.77052534108461 23 28.637204847183128 21.80537291959752 25.924726067320286 23.632696165899063 24 29.546083569396064 21.53281133815365 23.68849667684043 25.23260841560986 25 27.43771706398756 23.115887776563277 22.61310922997846 26.83328592947071 26 27.128295259316133 21.741537135080602 24.266207338117933 26.863960267485332 27 26.899162418387768 21.899946814141572 23.32493243355275 27.87595833391791 28 29.649139141603204 22.584348052338964 21.49072180990073 26.2757909961571 29 30.987267279983367 22.531736142022822 21.560233303530545 24.920763274463262 30 29.98292185505132 21.608062312908856 23.142416933765112 25.26659889827471 31 30.965138391644338 22.5935312221396 22.33978238438453 24.10154800183153 32 32.50274538513832 23.02297195434434 21.501052875926447 22.973229784590895 33 32.20435613863015 22.350368538460263 21.94337555465708 23.501899768252507 34 29.259683461238733 23.925792335369362 24.777722650415857 22.036801552976048 35 27.76633424442282 26.541273884212984 24.79003064882921 20.90236122253499 36 28.701614579812585 26.310291654921986 22.225949342064148 22.762144423201278 37 29.45744047201493 26.645477352645198 21.0671481028464 22.829934072493472 38 30.399608184755174 26.460538516382393 20.784893175501853 22.35496012336058 39 30.341320565326136 24.84895598838329 20.868370739870134 23.94135270642044 40 27.957714053948575 25.265833634124657 21.410751706220193 25.365700605706575 41 26.11221578408327 25.579591935646384 22.51725989518432 25.790932385086023 42 25.9696853361359 23.1393558771649 22.66081069533176 28.230148091367436 43 25.408236538047017 22.80404263541668 24.286678154131852 27.501042672404445 44 26.36724006208843 23.137315172764758 23.542267452167803 26.953177312979008 45 27.55697072737082 22.633516273979872 23.669556389126615 26.13995660952269 46 27.04060874212256 24.08681666694301 22.26587062189191 26.606703969042517 47 25.7443788159578 23.974896784997764 23.722104527430254 26.558619871614187 48 27.516029095342986 23.75379921764495 23.729055676793237 25.001116010218826 49 27.658113139202822 23.188077694718274 24.344455597460854 24.809353568618047 50 25.677481974840667 24.04459959466509 23.766744936183347 26.511173494310896 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 11.5 2 23.0 3 17.5 4 12.0 5 78.5 6 145.0 7 753.0 8 1361.0 9 1881.5 10 2402.0 11 3335.5 12 4269.0 13 3919.0 14 3569.0 15 3563.0 16 3557.0 17 3592.5 18 3628.0 19 4092.0 20 4556.0 21 5508.5 22 6461.0 23 7873.0 24 9285.0 25 10722.0 26 12159.0 27 14331.0 28 16503.0 29 19479.0 30 22455.0 31 24727.0 32 26999.0 33 27251.5 34 27504.0 35 30584.0 36 33664.0 37 37698.5 38 41733.0 39 44051.5 40 46370.0 41 48572.5 42 50775.0 43 56617.0 44 62459.0 45 63183.5 46 63908.0 47 70901.0 48 77894.0 49 83072.5 50 88251.0 51 93720.0 52 99189.0 53 113247.5 54 127306.0 55 130455.5 56 133605.0 57 135661.0 58 137717.0 59 141127.0 60 144537.0 61 123867.5 62 103198.0 63 85871.5 64 68545.0 65 57864.5 66 47184.0 67 40768.0 68 34352.0 69 30177.5 70 26003.0 71 23678.0 72 21353.0 73 15296.5 74 9240.0 75 6242.0 76 3244.0 77 2242.0 78 1240.0 79 1126.5 80 1013.0 81 680.5 82 348.0 83 196.0 84 44.0 85 32.0 86 20.0 87 12.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1568086.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.920526461913532 #Duplication Level Percentage of deduplicated Percentage of total 1 67.30989139806036 6.677495587629838 2 9.591347576486598 1.90302434875891 3 3.762662153974825 1.1198276839724348 4 1.8671181590045018 0.7409118041569376 5 1.1646650827622507 0.5777045386404811 6 0.7406928261728715 0.44088376693184944 7 0.5739835072729629 0.39859530008223565 8 0.45773520169096626 0.36327793447396467 9 0.36490372836526774 0.32580333839686915 >10 8.853032345675588 24.927651734785705 >50 3.6713144350320115 24.97322959358143 >100 1.5544793373734545 26.276584686687848 >500 0.05747654692809411 3.8902379535180907 >1k 0.028085130885318714 4.998429957365921 >5k 0.0019594277361850267 1.5511966656210643 >10k+ 6.531425787283422E-4 0.8351451053964034 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 12889 0.8219574691694206 No Hit TTCATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 9794 0.6245830904682524 No Hit TTCATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 8813 0.56202274620142 No Hit TTCATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5333 0.34009614268605165 No Hit TTCATAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 4729 0.30157784713338426 No Hit TTCATAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 4288 0.27345438961893676 No Hit TTCATAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 3638 0.23200258149106617 No Hit TTCATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3617 0.23066336922847344 No Hit TTCATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3481 0.22199037552787285 No Hit TTCATAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3094 0.1973106066886638 No Hit TTCATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 2203 0.1404897435472289 No Hit TTCATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2148 0.13698228285948602 No Hit TTCATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2001 0.12760779702133684 No Hit TTCATAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1970 0.12563086463369993 No Hit TTCATAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGA 1901 0.12123059577089522 No Hit TTCATAGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 1876 0.11963629545828482 No Hit TTCATAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1873 0.11944497942077156 No Hit TTCATAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1852 0.11810576715817883 No Hit TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1841 0.11740427502063024 No Hit TTCATAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1729 0.11026180962013563 No Hit TTCATAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 1720 0.10968786150759588 No Hit TTCATAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1719 0.10962408949509146 No Hit TTCATAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 1697 0.10822110521999431 No Hit TTCATAGGGGAGTGCAGTGCTTTCATAGGGAAAAAAAAAAAAAAAAAAAA 1693 0.10796601716997664 No Hit TTCATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1651 0.10528759264479116 No Hit TTCATAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 1592 0.1015250439070306 No Hit TTCATAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1576 0.10050469170695994 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.06198639615429256 0.0 0.0 0.0 0.0 7 0.0645372766544692 0.0 0.0 0.0 0.0 8 0.08832423731861645 0.0 0.0 0.0 0.0 9 0.11332286622034761 0.0 0.0 0.0 0.0 10 0.15866476711098754 0.0 0.0 0.0 0.0 11 0.19578007838855777 0.0 0.0 0.0 0.0 12 0.21707993056503277 0.0 0.0 0.0 0.0 13 0.23570135821632232 0.0 0.0 0.0 0.0 14 0.25553445410519576 0.0 0.0 0.0 0.0 15 0.2828288754570859 0.0 0.0 0.0 0.0 16 0.3055317119086581 0.0 0.0 0.0 0.0 17 0.32906358452278767 0.0 0.0 0.0 0.0 18 0.3528505451869349 0.0 0.0 0.0 0.0 19 0.37638241780106446 0.0 0.0 0.0 0.0 20 0.4013810467027956 0.0 0.0 0.0 0.0 21 0.4247853752919164 0.0 0.0 0.0 0.0 22 0.44991154821865637 0.0 0.0 0.0 0.0 23 0.4794379900082011 0.0 0.0 0.0 0.0 24 0.5092195198477635 0.0 0.0 0.0 0.0 25 0.5351747289370609 0.0 0.0 0.0 0.0 26 0.5651475748141365 0.0 0.0 0.0 0.0 27 0.5946740166036811 0.0 0.0 0.0 0.0 28 0.6262411627933672 0.0 0.0 0.0 0.0 29 0.6558313765954163 0.0 0.0 0.0 0.0 30 0.6837635180723506 0.0 0.0 0.0 0.0 31 0.706657670561436 0.0 0.0 0.0 0.0 32 0.7315287554381583 0.0 0.0 0.0 0.0 33 0.7531474676771555 0.0 0.0 0.0 0.0 34 0.775148811991179 0.0 0.0 0.0 0.0 35 0.8011040210804764 0.0 0.0 0.0 0.0 36 0.8267403701072518 0.0 0.0 0.0 0.0 37 0.8518027710214874 0.0 0.0 0.0 0.0 38 0.8775666640732714 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACG 30 2.528308E-6 44.000004 11 CCGATTA 35 1.4465331E-7 44.0 31 ATTACGC 25 4.4435852E-5 44.0 27 AATATCG 20 7.8573613E-4 44.0 18 TTACGTC 25 4.4435852E-5 44.0 30 CCGAATA 20 7.8573613E-4 44.0 29 TATCGTA 20 7.8573613E-4 44.0 26 CGTTTAT 25 4.4435852E-5 44.0 31 CGATACT 35 1.4465331E-7 44.0 26 GCGTATC 25 4.4435852E-5 44.0 26 TAGGGAT 15890 0.0 41.563248 5 AGGGATA 1990 0.0 41.346733 6 TAGGGGC 18650 0.0 40.850403 5 ATAGGGG 94840 0.0 40.733868 4 TAGGGAG 18480 0.0 40.690475 5 AGGGATC 4250 0.0 40.635292 6 CATAGGG 165340 0.0 40.60034 3 TCATAGG 167965 0.0 40.57619 2 TTCATAG 169400 0.0 40.566235 1 TAGGGGT 16235 0.0 40.436092 5 >>END_MODULE