##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527709_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2367008 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1732790932688 33.0 31.0 34.0 31.0 34.0 2 32.747284757803946 34.0 31.0 34.0 31.0 34.0 3 32.74874187159486 34.0 31.0 34.0 31.0 34.0 4 36.18459760169801 37.0 35.0 37.0 35.0 37.0 5 36.22808076694291 37.0 37.0 37.0 35.0 37.0 6 36.11859486744447 37.0 37.0 37.0 35.0 37.0 7 36.38539624707648 37.0 36.0 37.0 35.0 37.0 8 36.569657981722074 37.0 37.0 37.0 35.0 37.0 9 38.63980687855723 39.0 39.0 39.0 38.0 39.0 10 37.96638625640471 39.0 38.0 39.0 35.0 39.0 11 37.686124001270805 39.0 38.0 39.0 35.0 39.0 12 37.272058649569416 39.0 37.0 39.0 35.0 39.0 13 36.98898989779502 39.0 37.0 39.0 33.0 39.0 14 37.93391868553042 40.0 38.0 40.0 34.0 40.0 15 38.013883349781665 40.0 38.0 40.0 34.0 40.0 16 38.08332333477538 40.0 38.0 40.0 34.0 40.0 17 38.03844980667577 40.0 38.0 40.0 34.0 40.0 18 38.012834346145006 40.0 38.0 40.0 34.0 40.0 19 38.006164322216065 40.0 38.0 40.0 34.0 40.0 20 37.98938829104084 40.0 38.0 40.0 34.0 40.0 21 38.028063698982 40.0 38.0 40.0 34.0 40.0 22 37.92063229190607 40.0 38.0 40.0 34.0 40.0 23 37.92548567643202 40.0 37.0 40.0 34.0 40.0 24 37.901255086590325 40.0 37.0 40.0 34.0 40.0 25 37.818301416809746 40.0 37.0 40.0 34.0 40.0 26 37.63224289905231 40.0 37.0 40.0 34.0 40.0 27 37.52071475888548 40.0 36.0 40.0 33.0 40.0 28 37.44814508442726 40.0 36.0 40.0 33.0 40.0 29 37.358592366396735 40.0 36.0 40.0 33.0 40.0 30 37.213996741878354 40.0 36.0 40.0 33.0 40.0 31 37.112455471210914 40.0 35.0 40.0 32.0 40.0 32 37.03159389406373 39.0 35.0 40.0 32.0 40.0 33 36.69768416498803 39.0 35.0 40.0 31.0 40.0 34 36.60879895631954 39.0 35.0 40.0 31.0 40.0 35 36.53573371953115 39.0 35.0 40.0 31.0 40.0 36 36.4070476314402 39.0 35.0 40.0 31.0 40.0 37 36.39084405291406 39.0 35.0 40.0 31.0 40.0 38 36.016366653598126 39.0 35.0 40.0 30.0 40.0 39 36.06920677919128 38.0 35.0 40.0 30.0 40.0 40 35.88521078086766 38.0 35.0 40.0 30.0 40.0 41 35.56825874690749 38.0 35.0 40.0 29.0 40.0 42 35.625898602793065 38.0 35.0 40.0 29.0 40.0 43 35.56950884830132 38.0 35.0 40.0 29.0 40.0 44 35.44612776974138 38.0 34.0 40.0 29.0 40.0 45 35.304762806040365 38.0 34.0 40.0 28.0 40.0 46 35.01512373426706 37.0 34.0 40.0 27.0 40.0 47 34.71699081709905 37.0 34.0 40.0 26.0 40.0 48 34.69627225594506 37.0 33.0 40.0 26.0 40.0 49 34.61056574375752 36.0 33.0 40.0 27.0 40.0 50 34.459680744636266 36.0 33.0 40.0 26.0 40.0 51 34.71180452284065 36.0 34.0 40.0 27.0 40.0 52 34.41520138503968 36.0 34.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 3.0 14 3.0 15 16.0 16 60.0 17 161.0 18 364.0 19 715.0 20 1333.0 21 2306.0 22 3750.0 23 5913.0 24 8920.0 25 12432.0 26 16940.0 27 22152.0 28 27968.0 29 33637.0 30 39656.0 31 49375.0 32 64987.0 33 90926.0 34 163389.0 35 179894.0 36 237874.0 37 382886.0 38 709883.0 39 311464.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.68242608390001 0.26713048709594556 0.028939488163960577 0.021503940840081656 8 99.1655288026065 0.7581723424677906 0.055259635793372903 0.021039219132339224 9 98.34778758669172 0.8652695723884329 0.31233523503089133 0.4746076058889535 10 57.32798537225053 31.695245643445226 4.123348970514675 6.8534200137895604 11 34.60710736930336 25.16759554678311 21.945722194432804 18.279574889480728 12 32.12950695561654 18.006867741891874 26.582377414862986 23.281247887628602 13 24.521843610161014 18.076026781489542 29.83914714272195 27.562982465627496 14 25.811868823426032 19.517889250902403 29.7244876231935 24.945754302478065 15 26.082125620192244 18.839522299882383 28.470457218564533 26.607894861360844 16 29.897490840757612 20.89752125890576 25.396154132136434 23.80883376820019 17 31.00107815436196 20.640445659668238 23.125861847530725 25.232614338439074 18 28.35262914193784 21.679690140464245 25.087156443915692 24.880524273682216 19 29.108139896443102 21.374367978477473 23.528353093863647 25.989139031215778 20 27.982203693439146 22.522146101745324 24.300382592707756 25.195267612107774 21 29.494872852140762 21.15231549703254 26.209501615541647 23.143310035285054 22 27.971346104449164 20.47242763860536 25.826951155213674 25.729275101731808 23 28.6328985791345 21.707531195500817 25.940807973610568 23.718762251754114 24 29.599181751814953 21.342766902350984 23.726155551650017 25.33189579418405 25 27.45820884424556 22.912174356825158 22.606767699982424 27.022849098946857 26 27.237550527923858 21.642216671849017 24.20262204436994 26.917610755857186 27 26.930369479106115 21.748257716070245 23.466502859305926 27.85486994551772 28 29.71029248739337 22.375716516378482 21.526205234625316 26.387785761602835 29 31.027271559707447 22.364689937676594 21.591899985128908 25.016138517487057 30 30.141216252754532 21.407785694006947 23.1625326150144 25.288465438224122 31 31.078390947559114 22.366506577079587 22.408627262772242 24.14647521258906 32 32.608001324879346 22.785263083183498 21.533514039665267 23.073221552271896 33 32.15878442320432 22.175548202625425 22.14779164244481 23.51787573172545 34 29.248443604753344 23.628352755884222 24.955640200624586 22.16756343873785 35 27.7590950262948 26.414359393800108 24.80629554272736 21.02025003717774 36 28.87700421798321 26.166831713285294 22.24213014911652 22.714033919614973 37 29.486423366545445 26.496699630926468 21.148048506806905 22.86882849572118 38 30.432385526369153 26.37435107950628 20.71970183455231 22.473561559572254 39 30.36762021928105 24.75568312401141 20.874580905514474 24.002115751193067 40 27.978105692925414 25.141359894009653 21.435542254187563 25.444992158877366 41 26.290236450404898 25.48419777203964 22.514921791561328 25.710643985994132 42 25.940343251902824 22.98695230434371 22.807316240587273 28.265388203166193 43 25.505025754032097 22.579264624369667 24.286525436331434 27.6291841852668 44 26.353016128378105 22.952605145398746 23.61158052697752 27.082798199245627 45 27.519721099379467 22.451804134164313 23.721339344860684 26.307135421595536 46 27.165898890075574 23.94541970284849 22.232075261258093 26.65660614581784 47 25.91723390879963 23.872627384444836 23.73143648014709 26.47870222660844 48 27.624579215617352 23.66210845083751 23.64533622193081 25.067976111614325 49 27.721283578255758 23.13570549824927 24.235068069055956 24.90794285443902 50 25.714615244223932 24.000003379794236 23.767051061931348 26.51833031405048 51 25.135318511809 23.850109505333315 24.12987197339426 26.884700009463426 52 25.787027335775797 23.614199867512063 24.616815828252374 25.981956968459762 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 11.5 2 23.0 3 22.5 4 22.0 5 106.0 6 190.0 7 1024.0 8 1858.0 9 2480.5 10 3103.0 11 4327.0 12 5551.0 13 5186.0 14 4560.5 15 4300.0 16 4491.0 17 4682.0 18 4936.5 19 5191.0 20 6197.0 21 7203.0 22 8926.0 23 10649.0 24 12318.0 25 13987.0 26 17977.0 27 21967.0 28 24857.5 29 27748.0 30 31072.5 31 34397.0 32 36806.5 33 39216.0 34 40324.5 35 41433.0 36 47855.0 37 54277.0 38 58126.0 39 65445.0 40 68915.0 41 72696.5 42 76478.0 43 80758.0 44 85038.0 45 89509.0 46 93980.0 47 102090.0 48 110200.0 49 120376.5 50 130553.0 51 138360.0 52 146167.0 53 160880.0 54 175593.0 55 194164.5 56 212736.0 57 205761.0 58 198786.0 59 200844.5 60 202903.0 61 180180.5 62 157458.0 63 139632.0 64 101576.0 65 81346.0 66 66274.5 67 51203.0 68 47526.5 69 43850.0 70 39790.5 71 35731.0 72 27370.0 73 19009.0 74 13072.5 75 7136.0 76 5062.0 77 2988.0 78 2379.0 79 1770.0 80 1209.0 81 648.0 82 369.0 83 90.0 84 52.5 85 15.0 86 14.0 87 13.0 88 7.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2367008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.161823041725885 #Duplication Level Percentage of deduplicated Percentage of total 1 71.18162690979784 7.23335096479519 2 9.34086353600575 1.8984040461960072 3 3.9729346995266313 1.211167781187661 4 2.046997436763298 0.8320490287702045 5 1.1809663216225397 0.6000385389283093 6 0.7384154048446621 0.4502188005189501 7 0.5118869040773127 0.36411928956273953 8 0.3888454585242347 0.31611029920816286 9 0.30989791494737084 0.2834214995425502 >10 4.821019936126585 13.605690165435858 >50 3.4356074414300357 24.910963983669124 >100 1.9664990515218292 34.646358440467104 >500 0.06701501525433982 4.498235488862215 >1k 0.033942670063886404 5.847356794070451 >5k 0.002175812183582462 1.3544719780565817 >10k+ 0.0013054873101494772 1.9480429007289124 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 18015 0.7610874149981749 No Hit TTCATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 13588 0.574058051345834 No Hit TTCATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 12450 0.5259804783084806 No Hit TTCATAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7526 0.3179541429517771 No Hit TTCATAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 6923 0.2924789438818965 No Hit TTCATAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6046 0.2554279495464316 No Hit TTCATAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5087 0.21491266611688684 No Hit TTCATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5048 0.21326501642579998 No Hit TTCATAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 4859 0.2052802525382255 No Hit TTCATAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4326 0.1827623734267058 No Hit TTCATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3240 0.1368816666441347 No Hit TTCATAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3090 0.130544552447647 No Hit TTCATAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2958 0.12496789195473779 No Hit TTCATAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 2730 0.11533547837607647 No Hit TTCATAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2708 0.1144060349605916 No Hit TTCATAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 2692 0.11373007611296625 No Hit TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2677 0.11309636469331748 No Hit TTCATAGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGCG 2673 0.11292737498141113 No Hit TTCATAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2591 0.10946308588733117 No Hit TTCATAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2498 0.10553407508550879 No Hit TTCATAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2457 0.10380193053846881 No Hit TTCATAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2455 0.10371743568251565 No Hit TTCATAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2452 0.1035906933985859 No Hit TTCATAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2443 0.10321046654679664 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0519220889832227 0.0 0.0 0.0 0.0 7 0.05416120266598169 0.0 0.0 0.0 0.0 8 0.07452446295069556 0.0 0.0 0.0 0.0 9 0.0977605483378172 0.0 0.0 0.0 0.0 10 0.1393742648947532 0.0 0.0 0.0 0.0 11 0.1738481661236464 0.0 0.0 0.0 0.0 12 0.19416917898038366 0.0 0.0 0.0 0.0 13 0.21068792331922834 0.0 0.0 0.0 0.0 14 0.22969926590869147 0.0 0.0 0.0 0.0 15 0.25314658843569604 0.0 0.0 0.0 0.0 16 0.27481951898768403 0.0 0.0 0.0 0.0 17 0.29383086157714716 0.0 0.0 0.0 0.0 18 0.31195500817910204 0.0 0.0 0.0 0.0 19 0.33062837134475254 0.0 0.0 0.0 0.0 20 0.3541179412997337 0.0 0.0 0.0 0.0 21 0.3762133461314875 0.0 0.0 0.0 0.0 22 0.4006746069299301 0.0 0.0 0.0 0.0 23 0.426023063715881 0.0 0.0 0.0 0.0 24 0.4507800565101597 0.0 0.0 0.0 0.0 25 0.4733401830496559 0.0 0.0 0.0 0.0 26 0.49632278386891804 0.0 0.0 0.0 0.0 27 0.5215444983709392 0.0 0.0 0.0 0.0 28 0.5473154294366559 0.0 0.0 0.0 0.0 29 0.56755194743744 0.0 0.0 0.0 0.0 30 0.5890136408495451 0.0 0.0 0.0 0.0 31 0.6085319525747273 0.0 0.0 0.0 0.0 32 0.631049831686247 0.0 0.0 0.0 0.0 33 0.6506526382673823 0.0 0.0 0.0 0.0 34 0.6684388054455245 0.0 0.0 0.0 0.0 35 0.6914636536927632 0.0 0.0 0.0 0.0 36 0.7135168110965404 0.0 0.0 0.0 0.0 37 0.7343870405169733 0.0 0.0 0.0 0.0 38 0.7561867133528911 0.0 0.0 0.0 0.0 39 0.7768879530614177 0.0 0.0 0.0 0.0 40 0.7999128013086563 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATA 20 6.312816E-4 46.000004 26 ACGAGTA 20 6.312816E-4 46.000004 32 TATCGTT 35 1.0201802E-7 46.000004 21 TATCGTA 20 6.312816E-4 46.000004 26 CGTACGT 30 1.862245E-6 46.0 27 TAGGGAT 23980 0.0 43.10342 5 CGATACT 75 0.0 42.93333 26 TAGGGGC 28630 0.0 42.786587 5 ATAGGGG 143925 0.0 42.503456 4 TCATAGG 253795 0.0 42.41218 2 CATAGGG 250325 0.0 42.396442 3 TTCATAG 256000 0.0 42.390976 1 TAGGGAG 27705 0.0 42.363834 5 TAGGGAC 13055 0.0 42.335503 5 TAGGGGA 41105 0.0 42.31821 5 ATAGGGA 79970 0.0 42.232338 4 TAGGGGG 51170 0.0 42.09849 5 TAGGGGT 23725 0.0 42.09315 5 ATAGGGC 16580 0.0 42.074184 4 AGGGATT 8545 0.0 42.043297 6 >>END_MODULE