##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527706_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 486308 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.161716443077225 33.0 31.0 34.0 31.0 34.0 2 32.36527673819884 34.0 31.0 34.0 30.0 34.0 3 32.7046850966877 34.0 31.0 34.0 31.0 34.0 4 36.30650328598337 37.0 37.0 37.0 35.0 37.0 5 35.863958643493426 37.0 35.0 37.0 35.0 37.0 6 36.111392368622354 37.0 35.0 37.0 35.0 37.0 7 36.377417192396585 37.0 36.0 37.0 35.0 37.0 8 36.51142280201025 37.0 37.0 37.0 35.0 37.0 9 38.55172236525001 39.0 39.0 39.0 37.0 39.0 10 37.7402592595639 39.0 38.0 39.0 35.0 39.0 11 37.54009187593048 39.0 37.0 39.0 35.0 39.0 12 37.26764108342861 39.0 37.0 39.0 34.0 39.0 13 36.97457372693848 39.0 37.0 39.0 33.0 39.0 14 37.89299990952236 40.0 38.0 40.0 33.0 40.0 15 37.99661737006177 40.0 38.0 40.0 33.0 40.0 16 37.76733263692968 40.0 37.0 40.0 33.0 40.0 17 37.92574047722842 40.0 38.0 40.0 33.0 40.0 18 37.96743833126332 40.0 38.0 40.0 34.0 40.0 19 37.448450364789394 40.0 37.0 40.0 32.0 40.0 20 37.72934230981189 40.0 37.0 40.0 33.0 40.0 21 37.87782639808516 40.0 37.0 40.0 33.0 40.0 22 37.78064107520337 40.0 37.0 40.0 33.0 40.0 23 37.758938779538894 40.0 37.0 40.0 33.0 40.0 24 37.76289511996512 40.0 37.0 40.0 33.0 40.0 25 37.63826834022883 40.0 37.0 40.0 33.0 40.0 26 37.26485067076832 40.0 36.0 40.0 32.0 40.0 27 37.191917467942126 40.0 36.0 40.0 32.0 40.0 28 37.09466017421058 40.0 36.0 40.0 31.0 40.0 29 37.04177393750463 40.0 36.0 40.0 31.0 40.0 30 36.67741020094261 39.0 35.0 40.0 30.0 40.0 31 36.63171282397164 39.0 35.0 40.0 30.0 40.0 32 35.945474884229746 39.0 35.0 40.0 29.0 40.0 33 36.01960485947178 39.0 35.0 40.0 29.0 40.0 34 35.91602029989225 39.0 35.0 40.0 28.0 40.0 35 35.99305172853418 39.0 35.0 40.0 29.0 40.0 36 35.76383279732186 38.0 35.0 40.0 28.0 40.0 37 35.25065185026773 38.0 34.0 40.0 25.0 40.0 38 35.03550013571646 38.0 34.0 40.0 25.0 40.0 39 35.01157291263973 38.0 34.0 40.0 25.0 40.0 40 34.87516347664443 38.0 34.0 40.0 25.0 40.0 41 34.42510096482065 38.0 33.0 40.0 23.0 40.0 42 34.47593911677373 38.0 33.0 40.0 24.0 40.0 43 34.31732358916572 37.0 33.0 40.0 23.0 40.0 44 34.27535841483175 37.0 33.0 40.0 23.0 40.0 45 34.05374371797297 37.0 33.0 40.0 23.0 40.0 46 33.78895062388445 36.0 33.0 40.0 23.0 40.0 47 33.565880059550736 36.0 32.0 40.0 22.0 40.0 48 33.581767110555454 36.0 32.0 39.0 23.0 40.0 49 33.48259744853056 35.0 32.0 39.0 23.0 40.0 50 32.992247711326975 35.0 31.0 39.0 20.0 40.0 51 33.34518864587874 35.0 32.0 39.0 21.0 40.0 52 33.04928769421848 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 1.0 15 1.0 16 7.0 17 28.0 18 66.0 19 127.0 20 281.0 21 639.0 22 1094.0 23 1893.0 24 3015.0 25 3966.0 26 5508.0 27 7658.0 28 9415.0 29 10963.0 30 12571.0 31 14232.0 32 16423.0 33 20856.0 34 30198.0 35 34605.0 36 48025.0 37 78584.0 38 134660.0 39 51490.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.40367010207522 0.33127153984717506 0.15648519045543152 0.10857316762216537 8 99.35411303124768 0.3946058876267715 0.21755759724289958 0.03372348388264228 9 98.25686601906611 1.0814134252366814 0.3000156279559456 0.36170492774126684 10 56.01984750405094 33.38727719881228 2.90042524490652 7.6924500522302734 11 29.154363078542815 31.284905862128525 18.859241468369838 20.701489590958815 12 34.839443315758736 14.741891969698214 27.136711713564242 23.281953000978802 13 20.58921506534953 14.185043223636049 26.57945170550351 38.646290005510906 14 21.457183513329 24.671607294142806 30.22672873981098 23.64448045271721 15 30.560673482648852 15.519177146993263 25.062306192783172 28.857843177574704 16 27.017651364978573 17.115696225437375 30.518724758794836 25.34792765078921 17 36.884854865640705 19.910632767710997 19.26639084695296 23.938121519695336 18 35.183463977561544 17.53744540496969 22.72901124390304 24.550079373565723 19 29.85350847610979 17.06120401062701 27.572443801047896 25.512843712215304 20 29.69620076165722 26.599192281434814 20.631369420202834 23.073237536705133 21 31.974386602729133 15.730360183258346 29.986962994645367 22.308290219367148 22 28.598748118476358 17.245449385985836 20.59558962632735 33.56021286921046 23 26.173536112916096 28.362272469299292 20.982998428979165 24.481192988805446 24 26.988657394079475 28.53150678171036 20.526908872566356 23.952926951643814 25 26.86939141449452 19.479630193210888 19.667782557556116 33.98319583473848 26 34.360734349424646 19.391825756516447 19.760110876234815 26.487329017824095 27 26.651216924253767 17.634708867631215 20.610395058275824 35.103679149839195 28 27.94669221974551 27.856420211059657 19.693280801467385 24.503606767727447 29 37.13037827878629 19.404986140470648 18.754575289734078 24.71006029100899 30 28.032234715447824 27.164677529466925 19.543170171989768 25.259917583095486 31 36.51019518494452 20.316548360298412 18.937792510096482 24.235463944660584 32 31.0110053710817 18.535783906495475 26.464503976903526 23.988706745519302 33 36.88814496162925 19.179408934255658 19.713227008397972 24.21921909571712 34 28.560089490610892 21.36691150464315 20.75598180576918 29.31701719897678 35 29.61456525494131 27.864234189032466 21.082112570634248 21.439087985391975 36 36.866553706704394 21.71154905944381 18.137065398883014 23.284831834968784 37 30.358332579353004 22.453465704861937 24.22785559768706 22.960346118097995 38 37.43286147873364 20.951331255089368 18.338995040180297 23.276812225996693 39 29.506814611316283 20.66385911808977 19.81316367405019 30.016162596543754 40 27.998716862564464 21.136604785444614 25.08163550671591 25.783042845275013 41 27.153573455505565 20.808828972585275 21.337917533744047 30.699680038165113 42 25.67549783264927 19.86457142387129 28.19036495389753 26.26956578958191 43 26.20170755981806 18.436464133841106 23.294085229936584 32.067743076404255 44 26.424200301043783 19.602391899783676 21.930340442682414 32.04306735649013 45 27.4102009426125 25.6685063786736 22.2060916127228 24.7152010659911 46 27.77437344234518 20.407437261982118 26.44455776997294 25.373631525699764 47 32.550564662724035 20.574820895399622 22.04302623029027 24.831588211586073 48 33.396119331781506 20.911027579229625 22.451615025868378 23.24123806312049 49 32.67702772728394 20.993279978943384 22.462719099829737 23.866973193942933 50 27.863206034036043 23.24308874211405 22.116230866035515 26.77747435781439 51 25.202752165294424 26.46368145290639 22.634215353232932 25.69935102856626 52 31.82283655625653 22.18038773781225 22.107799995064855 23.888975710866365 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 5.0 6 10.0 7 8.5 8 7.0 9 8.5 10 10.0 11 64.0 12 118.0 13 251.5 14 363.5 15 342.0 16 338.0 17 334.0 18 258.0 19 182.0 20 475.0 21 768.0 22 616.5 23 465.0 24 656.0 25 847.0 26 981.0 27 1115.0 28 1273.5 29 1432.0 30 1568.5 31 1705.0 32 2031.5 33 2358.0 34 2429.0 35 2500.0 36 3314.5 37 4129.0 38 4750.5 39 6065.5 40 6759.0 41 6869.0 42 6979.0 43 8500.5 44 10022.0 45 10774.5 46 11527.0 47 12679.5 48 13832.0 49 16218.0 50 18604.0 51 20036.0 52 21468.0 53 25208.5 54 28949.0 55 38063.5 56 47178.0 57 49426.0 58 51674.0 59 50774.0 60 49874.0 61 45514.5 62 41155.0 63 40369.0 64 35315.0 65 31047.0 66 28731.0 67 26415.0 68 22252.0 69 18089.0 70 16569.0 71 15049.0 72 12049.0 73 9049.0 74 9577.5 75 10106.0 76 7119.0 77 4132.0 78 2986.0 79 1840.0 80 1228.5 81 617.0 82 403.0 83 189.0 84 119.5 85 50.0 86 45.0 87 40.0 88 21.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 486308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.653026477047465 #Duplication Level Percentage of deduplicated Percentage of total 1 76.58331789837625 12.753440206618027 2 9.346175217632895 3.1128420671673096 3 3.442612829536334 1.7198976780147563 4 1.6422794344631724 1.0939569161930298 5 0.8569488176822869 0.7135395675168823 6 0.518614558251528 0.5181901181966984 7 0.35315181823794534 0.411673260567377 8 0.2531332962894363 0.33723483882642274 9 0.2012718404642835 0.30166067595022084 >10 3.482126319688831 15.865459749788199 >50 2.2251034142125086 26.492881054804773 >100 1.0656294375501636 29.75912384743825 >500 0.017287151941717604 1.8537634585489033 >1k 0.011113169105389887 3.468583695929329 >5k 0.001234796567265543 1.59775286443982 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGAAG 7770 1.59775286443982 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGGAG 3610 0.7423279074166989 No Hit CTCCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2425 0.49865517326467995 No Hit CTCCATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2351 0.4834384793176341 No Hit CTCCATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2241 0.4608190693963497 No Hit CTCCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 1435 0.2950804839731199 No Hit CTCCATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1423 0.2926129119817071 No Hit CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1263 0.2597119520962024 No Hit CTCCATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1097 0.22557720621499133 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 1023 0.2103605122679454 Illumina Single End Adapter 2 (100% over 25bp) CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 904 0.18589042335310133 No Hit CTCCATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 892 0.18342285136168848 No Hit CTCCATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 793 0.16306538243253246 No Hit CTCCATGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 773 0.1589527624468444 No Hit CTCCATGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 653 0.13427704253271588 No Hit CTCCATGGGGCTCTTTCCCGTCTTGCAAGATGGCGGGTGAAAAAGCGCCTGA 640 0.13160383954201865 No Hit CTCCATGGGGGAAGACGCGCCTGCGCAGAAGTGACAGCACGAGCGGGATTGG 628 0.12913626755060578 No Hit CTCCATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 603 0.12399549256849568 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGCAG 539 0.11083510861429383 No Hit CTCCATGGGGTATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 527 0.10836753662288097 No Hit CTCCATGGGAAGTATTACAGCTCCTGAACTGCCTTCTACTAAATCAGACTTG 525 0.10795627462431216 No Hit CTCCATGGGGCTCTTTCTCTTGGGCCCGTGGCGCCGGCAAGATGGGCAAGTG 520 0.10692811962789014 No Hit CTCCATGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 511 0.10507744063433051 No Hit CTCCATGGGAAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTA 507 0.10425491663719288 No Hit CTCCATGGGGCTCAGCCCGTAGCCCGTCGGTTCCGGAGTAAGTTCCAGGTGG 487 0.1001422966515048 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.00843087097066057 0.0 0.0 0.0 0.0 8 0.011515335959926631 0.0 0.0 0.0 0.0 9 0.03598542487477072 0.0 0.0 0.0 0.0 10 0.09685220066295434 0.0 0.0 0.0 0.0 11 0.2689653470640006 0.0 0.0 0.0 0.0 12 0.28747213699959695 0.0 0.0 0.0 0.0 13 0.3148210599044227 0.0 0.0 0.0 0.0 14 0.4293575265058358 0.0 0.0 0.0 0.0 15 0.46739926137345056 0.0 0.0 0.0 0.0 16 0.5605501040492856 0.0 0.0 0.0 0.0 17 0.6181267838489188 0.0 0.0 0.0 0.0 18 0.6516446367322767 0.0 0.0 0.0 0.0 19 0.689480740600607 0.0 0.0 0.0 0.0 20 0.7297844164603502 0.0 0.0 0.0 0.0 21 0.7532263503787723 0.0 0.0 0.0 0.0 22 0.7760513912993412 0.0 0.0 0.0 0.0 23 0.8114199231762587 0.0 0.0 0.0 0.0 24 0.8630333039966441 0.0 0.0 0.0 0.0 25 0.8881202859093414 0.0 0.0 0.0 0.0 26 1.0121157784778372 0.0 0.0 0.0 0.0 27 1.0692811962789015 0.0 0.0 0.0 0.0 28 1.3553139162835075 0.0 0.0 0.0 0.0 29 1.396234485141104 0.0 0.0 0.0 0.0 30 1.5144723097296364 0.0 0.0 0.0 0.0 31 1.5434662806287374 0.0 0.0 0.0 0.0 32 1.610501986395453 0.0 0.0 0.0 0.0 33 1.6520394482509027 0.0 0.0 0.0 0.0 34 1.6941938031042056 0.0 0.0 0.0 0.0 35 1.882757429448004 0.0 0.0 0.0 0.0 36 1.9210047953149032 0.0 0.0 0.0 0.0 37 1.9740575931302795 0.0 0.0 0.0 0.0 38 2.0151837929871603 0.0 0.0 0.0 0.0 39 2.0435608708884083 0.0 0.0 0.0 0.0 40 2.0717323177903717 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGA 20 6.307844E-4 46.000004 32 AACAATT 20 6.307844E-4 46.000004 45 AACCGTA 20 6.307844E-4 46.000004 27 AAGTAAG 20 6.307844E-4 46.000004 16 AATCCAT 20 6.307844E-4 46.000004 24 AATCCAC 20 6.307844E-4 46.000004 32 ACACGGT 35 1.01794285E-7 46.000004 21 ACACGCG 20 6.307844E-4 46.000004 11 AATTTCG 20 6.307844E-4 46.000004 34 TTAATCG 20 6.307844E-4 46.000004 24 ATAGGTG 20 6.307844E-4 46.000004 19 AAATACG 20 6.307844E-4 46.000004 29 TGCCACG 20 6.307844E-4 46.000004 19 CTATCGA 20 6.307844E-4 46.000004 33 CGTGCAT 20 6.307844E-4 46.000004 13 GCGAAAC 20 6.307844E-4 46.000004 41 CTATATC 35 1.01794285E-7 46.000004 42 TAGAATC 20 6.307844E-4 46.000004 45 TTAGAAG 20 6.307844E-4 46.000004 21 GGCGTAA 20 6.307844E-4 46.000004 10 >>END_MODULE