##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527705_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4629956 Sequences flagged as poor quality 0 Sequence length 50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.632509682597416 33.0 31.0 34.0 31.0 34.0 2 33.073865280793164 34.0 33.0 34.0 31.0 34.0 3 33.13001613838231 34.0 33.0 34.0 31.0 34.0 4 36.63398226678612 37.0 37.0 37.0 35.0 37.0 5 36.522637364156374 37.0 37.0 37.0 35.0 37.0 6 36.56466692124072 37.0 37.0 37.0 35.0 37.0 7 36.572734600501605 37.0 37.0 37.0 35.0 37.0 8 36.69859044016833 37.0 37.0 37.0 35.0 37.0 9 38.76512714159703 39.0 39.0 39.0 39.0 39.0 10 38.3251585976195 39.0 39.0 39.0 37.0 39.0 11 38.13736977198055 39.0 39.0 39.0 37.0 39.0 12 37.63565096514956 39.0 37.0 39.0 35.0 39.0 13 37.52401556299887 39.0 37.0 39.0 35.0 39.0 14 38.24377251101306 40.0 38.0 40.0 35.0 40.0 15 38.29940997279456 40.0 38.0 40.0 35.0 40.0 16 38.34094557270091 40.0 38.0 40.0 35.0 40.0 17 38.212677615078846 40.0 38.0 40.0 34.0 40.0 18 38.14015705548822 40.0 38.0 40.0 34.0 40.0 19 38.13950888518163 40.0 38.0 40.0 34.0 40.0 20 38.041904501900234 40.0 38.0 40.0 34.0 40.0 21 38.058981554036365 40.0 38.0 40.0 34.0 40.0 22 38.10755760961875 40.0 38.0 40.0 34.0 40.0 23 38.07937958805656 40.0 38.0 40.0 34.0 40.0 24 38.03073506530084 40.0 38.0 40.0 34.0 40.0 25 38.02212979993762 40.0 37.0 40.0 34.0 40.0 26 37.924649823886014 40.0 37.0 40.0 34.0 40.0 27 37.81338850736378 40.0 37.0 40.0 34.0 40.0 28 37.635388759634 40.0 36.0 40.0 34.0 40.0 29 37.65989806382609 40.0 37.0 40.0 34.0 40.0 30 37.76415132238838 40.0 37.0 40.0 34.0 40.0 31 37.77933159623979 40.0 37.0 40.0 34.0 40.0 32 37.780549102410475 40.0 36.0 40.0 34.0 40.0 33 37.684737608737535 40.0 36.0 40.0 34.0 40.0 34 37.31339909061771 40.0 35.0 40.0 33.0 40.0 35 37.28552755144973 40.0 35.0 40.0 33.0 40.0 36 37.26069232623377 40.0 35.0 40.0 33.0 40.0 37 37.18359332140521 40.0 35.0 40.0 33.0 40.0 38 37.09888085329536 40.0 35.0 40.0 33.0 40.0 39 36.95586869508047 40.0 35.0 40.0 33.0 40.0 40 36.75656852894498 40.0 35.0 40.0 32.0 40.0 41 36.588018331059736 39.0 35.0 40.0 32.0 40.0 42 36.50397131203839 39.0 35.0 40.0 32.0 40.0 43 36.38225806033578 39.0 35.0 40.0 31.0 40.0 44 36.07986231402631 39.0 35.0 40.0 31.0 40.0 45 36.035532303114756 39.0 35.0 40.0 30.0 40.0 46 35.882171234456656 38.0 35.0 40.0 30.0 40.0 47 35.76759800741087 38.0 35.0 40.0 30.0 40.0 48 35.68782014343117 38.0 35.0 40.0 30.0 40.0 49 35.59592099795333 37.0 35.0 40.0 30.0 40.0 50 35.098313245309456 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 3.0 12 8.0 13 4.0 14 12.0 15 42.0 16 78.0 17 254.0 18 522.0 19 988.0 20 1713.0 21 2874.0 22 4429.0 23 6685.0 24 9715.0 25 13666.0 26 18474.0 27 24484.0 28 32799.0 29 44800.0 30 62844.0 31 84771.0 32 103660.0 33 129139.0 34 280418.0 35 371898.0 36 317559.0 37 607733.0 38 1408524.0 39 1101856.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.4974682264799 0.39581369671763617 0.0903464309380046 0.01637164586445314 8 99.24472284401838 0.644044997403863 0.07105899062539688 0.04017316795235203 9 97.59135939952776 1.2732518408382283 0.45073862472991105 0.6846501349040899 10 56.181181851404205 26.640425956531764 6.10742305110459 11.070969140959438 11 37.904312697572074 23.185835891313005 19.456534792123296 19.45331661899163 12 32.51901313964971 16.275943011121488 25.881217877664497 25.323825971564307 13 26.06441616291818 15.655440354076799 29.028763988253885 29.25137949475114 14 24.99606907711434 16.674694100764672 31.792764337285277 26.53647248483571 15 26.294850318231966 18.1438441315641 29.293604518055893 26.26770103214804 16 31.452177947263433 18.86566524606281 25.932341473655473 23.749815333018283 17 31.437339793293933 19.330723661304773 23.885907339076223 25.34602920632507 18 30.8469886106909 19.962349534207235 24.1970766028878 24.99358525221406 19 29.551598330524094 21.58109061943569 23.38896957120111 25.478341478839106 20 30.20834323263547 22.0280495106217 23.860183552500285 23.903423704242545 21 30.048795280127933 21.95256283213059 25.142787534049997 22.85585435369148 22 28.67316665644339 20.37630595193561 26.926713774385764 24.02381361723524 23 30.50823809124752 20.268270368012136 25.21671912216876 24.006772418571583 24 31.43403522625269 20.49354248722882 22.591856164507824 25.48056612201066 25 28.801569604549158 20.41241860613794 22.91691324928358 27.869098540029324 26 26.681074290986786 20.069650769899326 25.015010941788645 28.234263997325243 27 25.920807886727214 19.17387551847145 25.10321912346467 29.80209747133666 28 27.243088271249228 22.119670251725935 23.02764864288127 27.609592834143566 29 30.19994142492931 21.265299281461854 22.522892226189622 26.011867067419214 30 29.39382145316284 19.936841732405234 25.42039276399171 25.24894405044022 31 31.829071377784153 19.75556571163959 24.247833024763086 24.16752988581317 32 33.87762216314798 19.708826606559544 22.689394888417947 23.724156341874522 33 33.59574043468231 19.597659243413975 23.440481939785172 23.366118382118533 34 30.392513449371872 21.45962078257331 27.252354018051143 20.895511750003674 35 28.951592628526058 25.308987817594815 25.358081156710778 20.381338397168353 36 28.795846008039817 25.888647753887945 22.6947297123342 22.620776525738044 37 30.42467358221115 25.26596365062648 21.370311078550206 22.93905168861216 38 30.282663593347326 24.727232828994484 21.97444208973044 23.015661487927748 39 30.663271961979767 22.53831353904875 21.85063961730954 24.947774881661942 40 29.120881494338175 22.450882902558902 21.564459791842513 26.86377581126041 41 26.206426151782004 23.881350060346147 22.629826287766015 27.28239750010583 42 24.783496862605173 21.919171586079866 23.94223616811909 29.355095383195867 43 24.59816032808951 20.86967997104076 24.755246054174165 29.77691364669556 44 26.8862382277499 19.5493002525294 24.07975367368502 29.484707846035686 45 28.829496435819262 20.70786417840688 23.037907919643295 27.424731466130563 46 27.419807013284792 24.12482969600575 22.500969771634978 25.954393519074483 47 26.896929474059796 22.52282743075744 24.069947964948263 26.5102951302345 48 27.499116622274595 21.41348643486029 25.668472875336178 25.418924067528938 49 29.29939290999742 21.44065731942161 23.64508431613605 25.614865454444924 50 25.869122730324 22.078935523361345 23.8456477772143 28.206293969100354 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 18.5 2 37.0 3 30.0 4 23.0 5 176.0 6 329.0 7 1420.0 8 2511.0 9 5772.5 10 9034.0 11 13561.0 12 18088.0 13 15972.0 14 13856.0 15 14401.5 16 14947.0 17 15673.0 18 16399.0 19 16373.0 20 16347.0 21 17640.0 22 18933.0 23 21962.0 24 24991.0 25 27772.5 26 30554.0 27 35453.5 28 40353.0 29 43728.5 30 47104.0 31 53904.0 32 60704.0 33 63215.0 34 65726.0 35 76692.5 36 87659.0 37 90933.0 38 94207.0 39 103885.0 40 113563.0 41 119860.0 42 126157.0 43 137452.0 44 148747.0 45 166315.5 46 183884.0 47 196168.5 48 208453.0 49 215200.0 50 221947.0 51 243873.0 52 265799.0 53 305370.5 54 344942.0 55 393288.0 56 441634.0 57 461427.0 58 481220.0 59 485924.5 60 490629.0 61 418883.0 62 347137.0 63 289710.5 64 232284.0 65 190230.0 66 148176.0 67 134034.5 68 119893.0 69 98709.5 70 77526.0 71 71898.5 72 66271.0 73 49213.0 74 32155.0 75 20710.0 76 9265.0 77 7509.5 78 5754.0 79 3801.0 80 1848.0 81 1194.5 82 541.0 83 408.0 84 275.0 85 158.5 86 42.0 87 24.5 88 7.0 89 6.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 4629956.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.278288886597313 #Duplication Level Percentage of deduplicated Percentage of total 1 62.97649017751235 4.5836108857589295 2 10.604152243793047 1.5436016685556977 3 4.214881771847105 0.9203138147506914 4 2.0825033204543706 0.6062824309426018 5 1.109190243065275 0.4036503509612082 6 0.794528144093888 0.34696832167484 7 0.5893369838333558 0.30025553739265654 8 0.459438820077032 0.26751427665904354 9 0.37867079641391366 0.24804679042965072 >10 9.771788166981352 20.253430101580413 >50 4.496439618178126 22.626924076349674 >100 2.375457014216249 29.884047674418174 >500 0.09323825402554016 4.657105245962105 >1k 0.04661912701277008 6.237110328486534 >5k 0.004238102455706371 2.160573390378436 >10k+ 0.0030272160397902654 4.960565105699231 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 61548 1.329343086629765 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 37802 0.8164656424380707 No Hit TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 24023 0.5188602224297596 No Hit TTAACTGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 18150 0.39201236469633843 No Hit TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 18031 0.38944214588648357 No Hit TTAACTGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGAC 15423 0.3331133168436158 No Hit TTAACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 14205 0.30680637137804334 No Hit TTAACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 12986 0.2804778274350771 No Hit TTAACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 12152 0.2624646972886999 No Hit TTAACTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 10823 0.2337603208324226 No Hit TTAACTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 9641 0.2082309205530247 No Hit TTAACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 8974 0.1938247361314017 No Hit TTAACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 8528 0.18419181521379469 No Hit TTAACTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 8349 0.18032568776031566 No Hit TTAACTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 8222 0.17758268113131095 No Hit TTAACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 8006 0.17291741001426364 No Hit TTAACTGGGGCTTCCCAGCCCAGAGCTCGCCCAGACTTCCACACGCGCAC 7178 0.15503387073224886 No Hit TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 6947 0.15004462245429548 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTG 5758 0.1243640328331414 No Hit TTAACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 5658 0.12220418509376763 No Hit TTAACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 5517 0.11915879978125063 No Hit TTAACTGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTA 5197 0.11224728701525458 No Hit TTAACTGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGC 5070 0.1095042803862499 No Hit TTAACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5016 0.10833796260698805 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.019330637267395197 0.0 0.0 0.0 0.0 8 0.02453587031928597 0.0 0.0 0.0 0.0 9 0.027386869335259342 0.0 0.0 0.0 0.0 10 0.042462606556088224 0.0 0.0 0.0 0.0 11 0.05803510875697307 0.0 0.0 0.0 0.0 12 0.07056222564534091 0.0 0.0 0.0 0.0 13 0.07840247293926768 0.0 0.0 0.0 0.0 14 0.08619952327840696 0.0 0.0 0.0 0.0 15 0.09596203506037639 0.0 0.0 0.0 0.0 16 0.10874833367746907 0.0 0.0 0.0 0.0 17 0.12067069319881225 0.0 0.0 0.0 0.0 18 0.1327442420619116 0.0 0.0 0.0 0.0 19 0.14548734372421682 0.0 0.0 0.0 0.0 20 0.15753929410992243 0.0 0.0 0.0 0.0 21 0.16827373737461004 0.0 0.0 0.0 0.0 22 0.17907297607147887 0.0 0.0 0.0 0.0 23 0.19116812341197195 0.0 0.0 0.0 0.0 24 0.20298249054634646 0.0 0.0 0.0 0.0 25 0.2144296835650274 0.0 0.0 0.0 0.0 26 0.22840389843877565 0.0 0.0 0.0 0.0 27 0.2400022807992128 0.0 0.0 0.0 0.0 28 0.25518601040701033 0.0 0.0 0.0 0.0 29 0.2664388171291477 0.0 0.0 0.0 0.0 30 0.2792467142236341 0.0 0.0 0.0 0.0 31 0.2892900062117221 0.0 0.0 0.0 0.0 32 0.30032682815992207 0.0 0.0 0.0 0.0 33 0.31082368817327855 0.0 0.0 0.0 0.0 34 0.3220332979406284 0.0 0.0 0.0 0.0 35 0.33853453466944394 0.0 0.0 0.0 0.0 36 0.353761461232029 0.0 0.0 0.0 0.0 37 0.3666125552813029 0.0 0.0 0.0 0.0 38 0.3789884828279146 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAA 20 7.8589533E-4 44.000004 20 TAACTGG 476215 0.0 42.231094 2 TTAACTG 480095 0.0 42.21377 1 AACTGGG 465425 0.0 42.196705 3 ACTGGGG 263640 0.0 42.028145 4 ACTGGGA 125545 0.0 42.009315 4 ACTGGGC 50730 0.0 41.822987 4 ACTGGGT 27855 0.0 41.764854 4 CTGGGGG 108525 0.0 41.64644 5 CTGGGAT 35460 0.0 41.53694 5 TGGGGGG 54840 0.0 41.2841 6 CTGGGGA 67865 0.0 41.182938 5 CTGGGGC 54280 0.0 40.676495 5 CTGGGAC 24630 0.0 40.436054 5 TGGGGAG 31125 0.0 40.430523 6 TGGGATA 5015 0.0 40.358925 6 TGGGATT 12360 0.0 40.297733 6 TAACTAG 2060 0.0 40.262135 2 CTGGGGT 38815 0.0 40.134487 5 TGGGGCT 28980 0.0 40.11318 6 >>END_MODULE