##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527703_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6992729 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22308443527555 33.0 31.0 34.0 31.0 34.0 2 32.793511660469036 34.0 31.0 34.0 31.0 34.0 3 32.77909940453863 34.0 31.0 34.0 31.0 34.0 4 36.48446893909374 37.0 37.0 37.0 35.0 37.0 5 36.312579108957316 37.0 37.0 37.0 35.0 37.0 6 36.32670277941559 37.0 37.0 37.0 35.0 37.0 7 36.37849386126647 37.0 36.0 37.0 35.0 37.0 8 36.56014769055114 37.0 37.0 37.0 35.0 37.0 9 38.63770968387306 39.0 39.0 39.0 38.0 39.0 10 37.996374090859234 39.0 38.0 39.0 37.0 39.0 11 37.7641501622614 39.0 38.0 39.0 35.0 39.0 12 37.237382143652354 39.0 37.0 39.0 35.0 39.0 13 36.968839633281945 39.0 37.0 39.0 33.0 39.0 14 37.83115833603733 40.0 37.0 40.0 33.0 40.0 15 37.916757248850914 40.0 37.0 40.0 34.0 40.0 16 37.99085836159245 40.0 37.0 40.0 34.0 40.0 17 37.90011238816777 40.0 37.0 40.0 33.0 40.0 18 37.903763323303394 40.0 37.0 40.0 34.0 40.0 19 37.86758174097695 40.0 37.0 40.0 34.0 40.0 20 37.85173542403831 40.0 37.0 40.0 33.0 40.0 21 37.90167987348001 40.0 37.0 40.0 34.0 40.0 22 37.79842776689902 40.0 37.0 40.0 34.0 40.0 23 37.81301420375364 40.0 37.0 40.0 34.0 40.0 24 37.80991226744237 40.0 37.0 40.0 34.0 40.0 25 37.76551872666594 40.0 37.0 40.0 34.0 40.0 26 37.6027759691531 40.0 36.0 40.0 34.0 40.0 27 37.496651593390794 40.0 36.0 40.0 33.0 40.0 28 37.374586087920754 40.0 36.0 40.0 33.0 40.0 29 37.3084553970274 40.0 35.0 40.0 33.0 40.0 30 37.15029768778398 40.0 35.0 40.0 33.0 40.0 31 37.07363806033381 39.0 35.0 40.0 32.0 40.0 32 37.01839081709015 39.0 35.0 40.0 32.0 40.0 33 36.721924873679505 39.0 35.0 40.0 31.0 40.0 34 36.526057423360754 39.0 35.0 40.0 31.0 40.0 35 36.51733979680894 39.0 35.0 40.0 31.0 40.0 36 36.389896419552365 39.0 35.0 40.0 31.0 40.0 37 36.40518058114364 39.0 35.0 40.0 31.0 40.0 38 36.05753747928741 38.0 35.0 40.0 30.0 40.0 39 36.0960491962437 38.0 35.0 40.0 30.0 40.0 40 35.94371281941571 38.0 35.0 40.0 30.0 40.0 41 35.59221442730013 38.0 35.0 40.0 29.0 40.0 42 35.64764571886026 38.0 35.0 40.0 29.0 40.0 43 35.6022767363071 38.0 35.0 40.0 29.0 40.0 44 35.45249730112521 38.0 34.0 40.0 29.0 40.0 45 35.31483859877882 37.0 34.0 40.0 28.0 40.0 46 34.97216136933091 37.0 34.0 40.0 27.0 40.0 47 34.70035432518549 37.0 33.0 40.0 26.0 40.0 48 34.6900913792026 36.0 33.0 40.0 26.0 40.0 49 34.63219138050395 36.0 33.0 40.0 27.0 40.0 50 34.51693451869792 36.0 33.0 40.0 27.0 40.0 51 34.794946579511375 36.0 34.0 40.0 28.0 40.0 52 34.534540234577946 35.0 34.0 40.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 3.0 13 7.0 14 18.0 15 48.0 16 135.0 17 386.0 18 987.0 19 1859.0 20 3464.0 21 6178.0 22 9811.0 23 14853.0 24 21686.0 25 30292.0 26 42018.0 27 55907.0 28 74788.0 29 98199.0 30 126866.0 31 160343.0 32 208307.0 33 289956.0 34 543821.0 35 559132.0 36 664699.0 37 1095759.0 38 2051967.0 39 931236.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.54049413326328 0.38328383668235966 0.06405224626894593 0.012169783785414822 8 99.26131843519175 0.6441691076545366 0.06034839902990663 0.0341640581238026 9 97.5578061154665 1.2818028555089152 0.4599920860653974 0.7003989429591795 10 56.155872764410006 26.651740686647518 6.134471963663971 11.057914585278509 11 37.91042095296414 23.190044973857844 19.40218189493687 19.497352178241144 12 32.51760507235444 16.265881317580018 25.83506382129209 25.381449788773452 13 26.16201771869037 15.70391187760887 29.01991482867419 29.114155575026572 14 25.02899797775661 16.663651630143253 31.748391793818982 26.55895859828116 15 26.410432893938836 18.054296112433356 29.287850279912174 26.24742071371563 16 31.49422779003734 18.803645901335518 25.90721018932666 23.794916119300492 17 31.404820635834735 19.29685820800434 23.92294910899593 25.37537204716499 18 30.86493127361292 19.924023939723675 24.246242060860645 24.96480272580276 19 29.55209618447962 21.595846199673975 23.33020484563323 25.521852770213176 20 30.218230965335565 21.962169562126604 23.889843292940423 23.92975617959741 21 30.064142339850434 21.888392929284116 25.132791503860652 22.91467322700479 22 28.841829849261995 20.31747548060278 26.84431214194058 23.996382528194644 23 30.597138828059833 20.186010354469623 25.141757960304194 24.07509285716635 24 31.42585677208426 20.411201406489514 22.63584074257704 25.527101078849185 25 28.806907861008195 20.37971155467343 22.904119407458804 27.909261176859562 26 26.764643674880006 19.977736874973992 25.01835835479968 28.239261095346325 27 25.916319651455105 19.121104221256108 25.068267338831518 29.89430878845727 28 27.27229955572424 22.10793525675026 22.955315442654793 27.664449744870705 29 30.243929086912992 21.141116722813084 22.54846426910009 26.066489921173837 30 29.456468282983657 19.869538773774874 25.40457380802259 25.269419135218886 31 31.879528006876857 19.702522434374334 24.18073115660567 24.23721840214314 32 33.91996172023826 19.686791809034784 22.66242549940088 23.73082097132607 33 33.55382426517601 19.572072648604 23.444966907769484 23.429136178450502 34 30.31776292202944 21.369739911270695 27.30554837746465 21.00694878923522 35 28.993616083220157 25.26581539195928 25.33331407523443 20.407254449586134 36 29.00877468582009 25.819304594815556 22.649111670136225 22.522809049228133 37 30.493002088312014 25.178896536674024 21.360015524697154 22.968085850316807 38 30.376724165915768 24.61928669050381 21.938244711042 23.065744432538427 39 30.767115385137906 22.428554002307255 21.79277932835664 25.0115512841982 40 29.069137385418482 22.399366542018146 21.578985829423676 26.95251024313969 41 26.462015044484062 23.78313245086432 22.61714989955996 27.13770260509166 42 24.835725794607512 21.758500865684912 23.968038801446472 29.4377345382611 43 24.654980909456093 20.757003453158273 24.70215848490625 29.885857152479385 44 26.759338163970032 19.421530564104515 24.16042434934916 29.658706922576293 45 28.93642810982665 20.59537842807865 23.00133467205722 27.46685879003748 46 27.53756080065451 23.95877203306463 22.521722206022858 25.98194496025801 47 27.122100684868528 22.39523367772439 24.092468047882306 26.390197589524778 48 27.64023888241629 21.231095899755303 25.69448923303048 25.434175984797925 49 29.306841434867557 21.355768255855477 23.665567477303924 25.67182283197304 50 25.909970199045322 21.96544439231093 23.852890623960974 28.271694784682776 51 24.833695113881863 22.00016617260586 25.292814865269335 27.873323848242936 52 25.003700272096918 21.91690826285417 25.495239412252356 27.584152052796558 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 31.5 2 63.0 3 52.0 4 41.0 5 236.5 6 432.0 7 1902.0 8 3372.0 9 7774.5 10 12177.0 11 18191.0 12 24205.0 13 21678.0 14 19719.5 15 20288.0 16 21270.5 17 22253.0 18 21910.5 19 21568.0 20 23059.0 21 24550.0 22 27785.5 23 31021.0 24 35861.5 25 40702.0 26 44555.5 27 48409.0 28 55354.0 29 62299.0 30 67474.5 31 72650.0 32 79926.0 33 87202.0 34 99596.0 35 111990.0 36 123972.5 37 135955.0 38 137661.5 39 149905.5 40 160443.0 41 176764.5 42 193086.0 43 207594.0 44 222102.0 45 243183.5 46 264265.0 47 279807.0 48 295349.0 49 311362.5 50 327376.0 51 359999.5 52 392623.0 53 455642.5 54 518662.0 55 559276.5 56 599891.0 57 650993.0 58 702095.0 59 709596.5 60 717098.0 61 621467.5 62 525837.0 63 458253.0 64 325720.0 65 260771.0 66 225268.5 67 189766.0 68 165940.5 69 142115.0 70 126459.5 71 110804.0 72 86921.5 73 63039.0 74 43190.0 75 23341.0 76 16335.5 77 9330.0 78 7012.5 79 4695.0 80 2926.0 81 1157.0 82 728.0 83 299.0 84 229.5 85 160.0 86 100.5 87 41.0 88 28.0 89 9.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 6992729.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.067274499466768 #Duplication Level Percentage of deduplicated Percentage of total 1 69.38821283208001 5.597737599438119 2 9.8602174898915 1.5909016223079584 3 4.156900612986972 1.0060457493590274 4 2.168781232924602 0.6998461414117896 5 1.233038797049855 0.49736312221467377 6 0.8078867497827873 0.3910466504987862 7 0.5085071952987367 0.2871586990600206 8 0.35379392044468255 0.22833221379758095 9 0.3112708591736672 0.22599967181749528 >10 4.899853113596734 10.973120260320052 >50 3.610729536018626 20.91757358183314 >100 2.5422781302639157 36.869737409870304 >500 0.10259971949815605 5.5805811739358475 >1k 0.049633077302357075 7.568017603601683 >5k 0.0031483668438062325 1.7107246324424703 >10k+ 0.0031483668438062325 5.855813868091067 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 85289 1.2196811859861867 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 45742 0.6541366038924145 No Hit TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 34177 0.4887505292997913 No Hit TTAACTGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 25872 0.36998430798619536 No Hit TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 25582 0.3658371431239506 No Hit TTAACTGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT 21994 0.31452670338003946 No Hit TTAACTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 19757 0.28253633166679276 No Hit TTAACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 17182 0.2457123678037573 No Hit TTAACTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 15586 0.22288866049292058 No Hit TTAACTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 15424 0.2205719683974597 No Hit TTAACTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 13728 0.19631820423757304 No Hit TTAACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 13167 0.188295585314403 No Hit TTAACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 12422 0.1776416617889811 No Hit TTAACTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 12035 0.1721073417831579 No Hit TTAACTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 11987 0.17142091449561395 No Hit TTAACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 11482 0.16419912740791184 No Hit TTAACTGGGGCTTCCCAGCCCAGAGCTCGCCCAGACTTCCACACGCGCACGG 10518 0.15041337938307062 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 9394 0.1343395403997495 No Hit TTAACTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 9174 0.1311934153318397 No Hit TTAACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 8239 0.11782238379322293 No Hit TTAACTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 8156 0.1166354366085115 No Hit TTAACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 7885 0.11275998254758621 No Hit TTAACTGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 7432 0.10628182502139007 No Hit TTAACTGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACT 7425 0.10618172104195657 No Hit TTAACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7335 0.10489466987781165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.017332289010485034 0.0 0.0 0.0 0.0 8 0.021851268653482782 0.0 0.0 0.0 0.0 9 0.024411070413282138 0.0 0.0 0.0 0.0 10 0.03728158205473142 0.0 0.0 0.0 0.0 11 0.05085282155221516 0.0 0.0 0.0 0.0 12 0.06225037463914303 0.0 0.0 0.0 0.0 13 0.06975817309665511 0.0 0.0 0.0 0.0 14 0.0771801681432242 0.0 0.0 0.0 0.0 15 0.08551739957318523 0.0 0.0 0.0 0.0 16 0.09670044413275561 0.0 0.0 0.0 0.0 17 0.107626078459497 0.0 0.0 0.0 0.0 18 0.11733616446454596 0.0 0.0 0.0 0.0 19 0.13050698804429572 0.0 0.0 0.0 0.0 20 0.14121811384367963 0.0 0.0 0.0 0.0 21 0.1507708935953331 0.0 0.0 0.0 0.0 22 0.1597087489018951 0.0 0.0 0.0 0.0 23 0.17079168948203197 0.0 0.0 0.0 0.0 24 0.18094509311028642 0.0 0.0 0.0 0.0 25 0.19115569901250284 0.0 0.0 0.0 0.0 26 0.2022815412981112 0.0 0.0 0.0 0.0 27 0.21287826254957112 0.0 0.0 0.0 0.0 28 0.2263207969306404 0.0 0.0 0.0 0.0 29 0.23630259373700882 0.0 0.0 0.0 0.0 30 0.24795755705676567 0.0 0.0 0.0 0.0 31 0.2576819436303051 0.0 0.0 0.0 0.0 32 0.2673491279298826 0.0 0.0 0.0 0.0 33 0.27763123667455153 0.0 0.0 0.0 0.0 34 0.2876273340494105 0.0 0.0 0.0 0.0 35 0.3015560877591567 0.0 0.0 0.0 0.0 36 0.31439799826362497 0.0 0.0 0.0 0.0 37 0.3275831224118652 0.0 0.0 0.0 0.0 38 0.33942399312199856 0.0 0.0 0.0 0.0 39 0.3505641359760975 0.0 0.0 0.0 0.0 40 0.36184728451510134 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACTGG 720420 0.0 44.12053 2 TTAACTG 725845 0.0 44.103203 1 AACTGGG 703790 0.0 44.076447 3 ACTGGGA 187440 0.0 43.905407 4 ACTGGGG 400910 0.0 43.856102 4 ACTGGGC 76940 0.0 43.73707 4 CTGGGGG 163280 0.0 43.406727 5 ACTGGGT 42635 0.0 43.23795 4 TGGGGGG 82005 0.0 43.00457 6 CTGGGAT 53045 0.0 42.917145 5 CTGGGGA 104210 0.0 42.812973 5 CTGGGAC 36935 0.0 42.55638 5 CTGGGGC 82620 0.0 42.550835 5 TAACTAG 3015 0.0 42.109455 2 TGGGATA 6950 0.0 41.96259 6 TGGGGAG 47935 0.0 41.95035 6 CTGGGGT 60020 0.0 41.94952 5 TGGGGGC 38605 0.0 41.84743 6 TGGGGTC 17305 0.0 41.613987 6 TGGGGCT 45395 0.0 41.612293 6 >>END_MODULE