##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527689_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2270302 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1605099233494 33.0 31.0 34.0 31.0 34.0 2 32.75482821228189 34.0 31.0 34.0 31.0 34.0 3 32.83353051708539 34.0 31.0 34.0 31.0 34.0 4 36.45678416351657 37.0 37.0 37.0 35.0 37.0 5 36.285232977815284 37.0 37.0 37.0 35.0 37.0 6 36.22897746643398 37.0 37.0 37.0 35.0 37.0 7 36.510505210320034 37.0 37.0 37.0 35.0 37.0 8 36.6320176787053 37.0 37.0 37.0 35.0 37.0 9 38.71144279483522 39.0 39.0 39.0 39.0 39.0 10 38.12074120535506 39.0 38.0 39.0 37.0 39.0 11 37.813174194446376 39.0 38.0 39.0 35.0 39.0 12 37.1381155458613 39.0 35.0 39.0 34.0 39.0 13 36.98282739476951 39.0 35.0 39.0 34.0 39.0 14 37.71731293898345 40.0 36.0 40.0 33.0 40.0 15 37.760262291096076 40.0 36.0 40.0 33.0 40.0 16 37.79030631167131 40.0 36.0 40.0 34.0 40.0 17 37.661160057120156 40.0 36.0 40.0 33.0 40.0 18 37.6593889271119 40.0 36.0 40.0 33.0 40.0 19 37.6567602019467 40.0 36.0 40.0 33.0 40.0 20 37.640968470274 40.0 36.0 40.0 33.0 40.0 21 37.62651444609572 40.0 36.0 40.0 33.0 40.0 22 37.64261759008273 40.0 36.0 40.0 33.0 40.0 23 37.65002981982133 40.0 36.0 40.0 34.0 40.0 24 37.630327154713335 40.0 36.0 40.0 34.0 40.0 25 37.62565905328895 40.0 36.0 40.0 34.0 40.0 26 37.50018015224406 40.0 35.0 40.0 34.0 40.0 27 37.44456992946313 40.0 35.0 40.0 33.0 40.0 28 37.30783657856972 40.0 35.0 40.0 33.0 40.0 29 37.25260339813822 40.0 35.0 40.0 33.0 40.0 30 37.10673778202195 39.0 35.0 40.0 33.0 40.0 31 37.01092850202308 39.0 35.0 40.0 32.0 40.0 32 36.919178153391044 39.0 35.0 40.0 32.0 40.0 33 36.809750861339154 39.0 35.0 40.0 32.0 40.0 34 36.48007181423441 39.0 35.0 40.0 31.0 40.0 35 36.36632791584556 39.0 35.0 40.0 30.0 40.0 36 36.47338900287274 39.0 35.0 40.0 31.0 40.0 37 36.49409902294937 38.0 35.0 40.0 31.0 40.0 38 36.45648948906357 38.0 35.0 40.0 31.0 40.0 39 36.375002973172734 38.0 35.0 40.0 31.0 40.0 40 36.18099310135832 38.0 35.0 40.0 31.0 40.0 41 36.05840588608916 38.0 35.0 40.0 31.0 40.0 42 35.99573096442676 38.0 35.0 40.0 30.0 40.0 43 35.89731322088427 38.0 35.0 40.0 30.0 40.0 44 35.766636332963635 38.0 35.0 40.0 30.0 40.0 45 35.6621009011136 37.0 34.0 40.0 30.0 40.0 46 35.493155095665685 37.0 34.0 40.0 30.0 40.0 47 35.35003536974376 37.0 34.0 40.0 29.0 40.0 48 35.17720329718249 36.0 34.0 40.0 29.0 40.0 49 35.44695903892962 37.0 34.0 40.0 30.0 40.0 50 35.50606395096335 36.0 34.0 40.0 30.0 40.0 51 35.52340041104664 36.0 35.0 40.0 30.0 40.0 52 35.05979644998771 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 7.0 15 17.0 16 55.0 17 149.0 18 312.0 19 706.0 20 1155.0 21 2073.0 22 3107.0 23 4513.0 24 6542.0 25 9238.0 26 12588.0 27 16578.0 28 21956.0 29 27549.0 30 35733.0 31 46661.0 32 61094.0 33 87193.0 34 196367.0 35 210520.0 36 194200.0 37 314287.0 38 668740.0 39 348961.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.33947113643912 0.6115485957374833 0.02175921969852469 0.027221048124875014 8 99.42020929374154 0.4937228615400066 0.051490947019383324 0.03457689769907263 9 98.7712207450815 0.7769891406517724 0.17473446263977216 0.27705565162696416 10 62.77001914282769 29.043580986141933 2.835173470313641 5.351226400716732 11 40.3966961223661 23.260649904726332 20.330334906985943 16.012319065921627 12 37.05502615951534 14.965850358234277 24.188235750133682 23.790887732116698 13 27.255580975570652 15.912949026164803 27.54897806547323 29.28249193279132 14 25.878010943037534 17.648004538603235 30.209901590184916 26.264082928174314 15 27.832949096640007 18.472740630982134 28.43383831754542 25.260471954832443 16 34.10202695500422 19.800978019664345 24.376624783839333 21.720370241492102 17 33.885315698087744 19.694472365350514 23.14035753833631 23.27985439822543 18 31.529417672186344 20.34134665784552 23.384554125398296 24.74468154456984 19 30.155635681948922 22.992844123821413 22.40186547868962 24.44965471554005 20 30.797136240024454 24.330948041273803 21.439834876593512 23.43208084210823 21 30.800615953296077 23.772123708651975 23.53131874085474 21.8959415971972 22 29.385121450802583 21.653550937276187 25.069660335937687 23.891667275983547 23 30.607734125239727 21.068078167574182 25.04279166384032 23.281396043345776 24 32.41154701004536 20.229423222108778 22.65795475667995 24.701075011165916 25 29.999489054760115 20.44349165881896 21.25047680881222 28.306542477608705 26 26.82770838417092 21.17621356101523 23.557835036924605 28.43824301788925 27 25.033673934128586 19.63906123502512 24.27998565829568 31.047279172550613 28 26.803834908307355 22.81233950373122 21.681212455435446 28.702613132525983 29 30.996669165599993 22.666323687333225 21.13947836014768 25.1975287869191 30 29.821010596828085 20.203964054121435 23.93122148507115 26.04380386397933 31 32.14951138659086 20.66434333405864 22.67147718673551 24.51466809261499 32 35.410002722104814 20.066845732417978 21.93584818231231 22.5873033631649 33 34.80475284785901 19.589464309153584 22.638441934156777 22.96734090883063 34 29.53752408269913 21.313287835715247 27.896773204622114 21.252414876963506 35 27.15220265850094 25.581486515890838 26.99742148841872 20.268889337189503 36 26.907741789418328 28.08172657205958 22.81890250724353 22.19162913127857 37 29.948526671781995 27.756395404664225 19.743672868191105 22.55140505536268 38 30.754895163727113 26.349886490872137 20.842381321956285 22.052837023444457 39 31.38393041982961 24.571929197084792 20.633025914614002 23.411114468471595 40 29.103484910818032 22.853787733966673 20.220129304383295 27.822598050832003 41 25.625621613336026 24.834493384580554 22.05715362978141 27.48273137230201 42 24.17114551279962 23.735168272767236 22.222990597726646 29.8706956167065 43 24.31980414940391 21.165950609214104 23.748866890836553 30.765378350545436 44 25.113707339375996 20.235898131614206 23.861803407652374 30.788591121357424 45 28.233204216883923 21.02332641208086 23.423315488424006 27.320153882611216 46 27.242410921542596 24.687816863130983 22.253427077102515 25.8163451382239 47 25.108465745966836 22.401425008655238 24.484539942263186 28.00556930311474 48 26.33680453085096 21.16921008746854 26.430404413157373 26.06358096852313 49 28.931084939360492 19.811593347492977 24.955270268008398 26.302051445138137 50 25.96566447987977 21.001875521406404 25.30918794063521 27.723272058078617 51 24.483086391149726 20.982362698883232 26.69433405775972 27.840216852207327 52 24.535502325241314 21.43124571092304 26.06534284866066 27.967909115174987 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 24.5 4 49.0 5 34.5 6 20.0 7 22.5 8 25.0 9 221.0 10 417.0 11 981.0 12 1545.0 13 2354.5 14 2652.5 15 2141.0 16 2272.0 17 2403.0 18 3120.0 19 3837.0 20 3690.0 21 3543.0 22 3889.0 23 4235.0 24 5129.5 25 6024.0 26 7921.5 27 9819.0 28 11202.5 29 12586.0 30 16022.0 31 19458.0 32 19996.0 33 20534.0 34 27340.0 35 34146.0 36 34108.5 37 34071.0 38 39390.0 39 48246.5 40 51784.0 41 57633.0 42 63482.0 43 65891.0 44 68300.0 45 75076.0 46 81852.0 47 86821.0 48 91790.0 49 96364.0 50 100938.0 51 111759.0 52 122580.0 53 130387.0 54 138194.0 55 155279.0 56 172364.0 57 197293.5 58 222223.0 59 225473.5 60 228724.0 61 225626.5 62 222529.0 63 189285.0 64 139071.5 65 122102.0 66 98535.0 67 74968.0 68 63056.5 69 51145.0 70 45880.0 71 40615.0 72 35965.5 73 31316.0 74 22987.5 75 14659.0 76 10919.5 77 7180.0 78 4953.5 79 2727.0 80 2182.0 81 1637.0 82 968.5 83 300.0 84 179.5 85 59.0 86 42.5 87 26.0 88 24.5 89 19.0 90 15.0 91 9.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2270302.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.273715395934258 #Duplication Level Percentage of deduplicated Percentage of total 1 66.21699611956437 4.816435841473943 2 9.994570524786301 1.453953230037777 3 4.343213471673892 0.9477389609023039 4 2.3316097419623296 0.6783786270968679 5 1.2533341852892521 0.45581980798945754 6 0.758813840975516 0.3311637550650972 7 0.5005554636777878 0.25486285878704956 8 0.3768022665067125 0.2192601957690238 9 0.29596647427871825 0.19374983105773438 >10 6.054884424449521 12.73548858626546 >50 4.8623576401704565 25.28710050270986 >100 2.8480301754902007 36.5775865600506 >500 0.10655895214419119 5.094209953189836 >1k 0.05085768170518216 6.567213294542351 >5k 0.004238140142098513 2.241477041023689 >10k+ 0.001210897183456718 2.145560954038943 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 28072 1.2364874805202126 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 20648 0.9094825269942061 No Hit AACCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9097 0.4006955902782978 No Hit AACCTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8871 0.3907409675012399 No Hit AACCTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7961 0.35065819437237866 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 7775 0.34246545173285314 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 6464 0.28471983022522995 No Hit AACCTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 5492 0.24190614288319348 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGAGGGTAAGAGTACCCCACCTGA 5238 0.230718204009863 No Hit AACCTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4529 0.19948887857210185 No Hit AACCTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 4054 0.17856655193890505 No Hit AACCTAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 3634 0.16006681049481525 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 3615 0.15922991742948736 No Hit AACCTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3445 0.1517419268449748 No Hit AACCTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3441 0.1515657388312216 No Hit AACCTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3138 0.13821949678941392 No Hit AACCTAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2964 0.13055531819114813 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 2946 0.1297624721292586 No Hit AACCTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2776 0.12227448154474602 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTGCTC 2750 0.12112925945534998 No Hit AACCTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2704 0.11910309729718778 No Hit AACCTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2616 0.11522696099461657 No Hit AACCTAGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 2333 0.10276165902157511 No Hit AACCTAGGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTC 2294 0.10104382588748105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.031713842475582545 0.0 0.0 0.0 0.0 7 0.03484117971970249 0.0 0.0 0.0 0.0 8 0.035898307802221904 0.0 0.0 0.0 0.0 9 0.047967186744318595 0.0 0.0 0.0 0.0 10 0.07479181183824883 0.0 0.0 0.0 0.0 11 0.09716768958490984 0.0 0.0 0.0 0.0 12 0.10474377417629901 0.0 0.0 0.0 0.0 13 0.11157105970923692 0.0 0.0 0.0 0.0 14 0.12421254969603163 0.0 0.0 0.0 0.0 15 0.13650166365531988 0.0 0.0 0.0 0.0 16 0.14790983754584192 0.0 0.0 0.0 0.0 17 0.15856921237791272 0.0 0.0 0.0 0.0 18 0.1681714591274641 0.0 0.0 0.0 0.0036559012853796544 19 0.18054866709362896 0.0 0.0 0.0 0.0036559012853796544 20 0.1923973110185341 0.0 0.0 0.0 0.0036559012853796544 21 0.20266026281966013 0.0 0.0 0.0 0.0036559012853796544 22 0.21138156950044532 0.0 0.0 0.0 0.0036559012853796544 23 0.2223933203600226 0.0 0.0 0.0 0.0036559012853796544 24 0.23336102421616156 0.0 0.0 0.0 0.0036559012853796544 25 0.24256684793476815 0.0 0.0 0.0 0.0036559012853796544 26 0.2543273978527967 0.0 0.0 0.0 0.0036559012853796544 27 0.2648986786779909 0.0 0.0 0.0 0.0036559012853796544 28 0.2802710828779607 0.0 0.0 0.0 0.0036559012853796544 29 0.2903137996618952 0.0 0.0 0.0 0.0036559012853796544 30 0.30176602055585555 0.0 0.0 0.0 0.0036559012853796544 31 0.3112801732985303 0.0 0.0 0.0 0.0036559012853796544 32 0.32273239419249067 0.0 0.0 0.0 0.0036559012853796544 33 0.33334772202112317 0.0 0.0 0.0 0.0036559012853796544 34 0.34378686183600243 0.0 0.0 0.0 0.0036559012853796544 35 0.3602163941184917 0.0 0.0 0.0 0.0036559012853796544 36 0.3759411743459681 0.0 0.0 0.0 0.0036559012853796544 37 0.3895957454118439 0.0 0.0 0.0 0.0036559012853796544 38 0.40073963728173606 0.0 0.0 0.0 0.0036559012853796544 39 0.41135496511036856 0.0 0.0 0.0 0.0036559012853796544 40 0.4232036090352737 0.0 0.0 0.0 0.0036559012853796544 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCGT 30 1.8622104E-6 46.0 13 TACGACT 30 1.8622104E-6 46.0 23 CGAATAC 20 6.3127634E-4 46.0 40 ACGTATT 30 1.8622104E-6 46.0 39 ATACGAC 25 3.4182165E-5 46.0 46 ACGGTAT 55 1.8189894E-12 46.0 12 CGAAACG 35 1.020162E-7 45.999996 36 TAGGGAT 23375 0.0 44.730694 5 CTAGGGA 67700 0.0 44.498375 4 AACCTAG 233260 0.0 44.468704 1 ACCTAGG 231785 0.0 44.4669 2 CCTAGGG 229195 0.0 44.4295 3 CTAGGGG 144300 0.0 44.38538 4 TAGGGGA 36330 0.0 44.36031 5 TAGGGGG 66500 0.0 44.322556 5 TAGGGAG 21495 0.0 44.26657 5 TAGGGGT 18095 0.0 44.144238 5 TAGGGGC 23855 0.0 43.888496 5 AGGGATA 2810 0.0 43.708187 6 AGGGGGG 36130 0.0 43.542763 6 >>END_MODULE