##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527688_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2284717 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13059691856803 33.0 31.0 34.0 31.0 34.0 2 32.739756389959894 34.0 31.0 34.0 31.0 34.0 3 32.82433491762875 34.0 31.0 34.0 31.0 34.0 4 36.44691399416208 37.0 37.0 37.0 35.0 37.0 5 36.29703459990887 37.0 37.0 37.0 35.0 37.0 6 36.16390476369721 37.0 37.0 37.0 35.0 37.0 7 36.47106096728829 37.0 37.0 37.0 35.0 37.0 8 36.60469589887938 37.0 37.0 37.0 35.0 37.0 9 38.666746034629234 39.0 39.0 39.0 38.0 39.0 10 38.02792512157961 39.0 38.0 39.0 37.0 39.0 11 37.77903040070171 39.0 38.0 39.0 35.0 39.0 12 37.08884338848094 39.0 35.0 39.0 34.0 39.0 13 36.79083799000051 39.0 35.0 39.0 33.0 39.0 14 37.65781495038554 40.0 36.0 40.0 33.0 40.0 15 37.71597138726591 40.0 36.0 40.0 33.0 40.0 16 37.78348915861352 40.0 36.0 40.0 34.0 40.0 17 37.681766713339115 40.0 36.0 40.0 33.0 40.0 18 37.6958200950052 40.0 36.0 40.0 33.0 40.0 19 37.64800717112885 40.0 36.0 40.0 33.0 40.0 20 37.642489201069544 40.0 36.0 40.0 33.0 40.0 21 37.68491414910468 40.0 36.0 40.0 33.0 40.0 22 37.5875961880618 40.0 36.0 40.0 33.0 40.0 23 37.62358445269152 40.0 36.0 40.0 34.0 40.0 24 37.65093926293716 40.0 36.0 40.0 34.0 40.0 25 37.61439250462968 40.0 36.0 40.0 34.0 40.0 26 37.44371316009816 40.0 35.0 40.0 34.0 40.0 27 37.39001591882058 40.0 35.0 40.0 33.0 40.0 28 37.2742895509597 40.0 35.0 40.0 33.0 40.0 29 37.215821478108666 40.0 35.0 40.0 33.0 40.0 30 37.0640713926495 39.0 35.0 40.0 32.0 40.0 31 36.98215096224171 39.0 35.0 40.0 32.0 40.0 32 36.89451166161936 39.0 35.0 40.0 32.0 40.0 33 36.59167503021162 39.0 35.0 40.0 31.0 40.0 34 36.38665313909775 39.0 35.0 40.0 30.0 40.0 35 36.35658595791076 39.0 35.0 40.0 30.0 40.0 36 36.315355468532864 39.0 35.0 40.0 31.0 40.0 37 36.41269137490551 38.0 35.0 40.0 31.0 40.0 38 36.102066908067826 38.0 35.0 40.0 30.0 40.0 39 36.19811031300594 38.0 35.0 40.0 31.0 40.0 40 36.0830584269299 38.0 35.0 40.0 30.0 40.0 41 35.76765043548063 38.0 35.0 40.0 30.0 40.0 42 35.84026292971952 38.0 35.0 40.0 30.0 40.0 43 35.85255416754023 38.0 35.0 40.0 30.0 40.0 44 35.72003841175953 38.0 35.0 40.0 30.0 40.0 45 35.61368694678597 37.0 34.0 40.0 30.0 40.0 46 35.26963908440301 37.0 34.0 40.0 29.0 40.0 47 35.04014807960898 37.0 34.0 40.0 28.0 40.0 48 35.03416878326725 36.0 34.0 40.0 28.0 40.0 49 34.97431323004118 36.0 34.0 40.0 28.0 40.0 50 34.83092785671048 36.0 34.0 40.0 28.0 40.0 51 35.15860257528613 36.0 34.0 40.0 29.0 40.0 52 34.90291182671639 35.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 5.0 15 17.0 16 61.0 17 136.0 18 371.0 19 723.0 20 1216.0 21 2145.0 22 3147.0 23 4666.0 24 6862.0 25 9607.0 26 13055.0 27 17763.0 28 22632.0 29 29279.0 30 37062.0 31 48447.0 32 64397.0 33 95672.0 34 203452.0 35 209054.0 36 207760.0 37 337390.0 38 665453.0 39 304341.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.33151458145582 0.614824505617107 0.024423156128308234 0.02923775679876326 8 99.42469898897764 0.48820050798413983 0.051034767106823295 0.03606573593140857 9 98.75336857912818 0.7768139336294166 0.19162110668411012 0.2781963805582923 10 62.72273546351692 29.043947237228945 2.8782558189920238 5.355061480262107 11 40.338212566370366 23.277893936097993 20.349566270133238 16.034327227398403 12 36.99985599967086 15.000501156160698 24.2535071083202 23.74613573584825 13 27.476794718995833 15.91566920542019 27.496403274453684 29.11113280113029 14 25.82709368381292 17.660086566520057 30.183563215925645 26.32925653374138 15 27.756129096076233 18.50483013869989 28.46352524185709 25.27551552336679 16 34.16935226551034 19.772076804260657 24.366124994911843 21.692445935317153 17 33.79989731769843 19.785032456973884 23.131267461134136 23.283802764193553 18 31.45361110369468 20.41128069690907 23.396727034464224 24.738381164932026 19 30.099395242386695 23.014885432200135 22.402336919627245 24.483382405785925 20 30.80994276315185 24.30143426953973 21.472287377386344 23.416335589922078 21 30.748228336376016 23.83047878577522 23.538801523339654 21.882491354509114 22 29.45577067094087 21.66530909517459 25.068312618149207 23.81060761573534 23 30.561903290429406 21.083749103280624 25.045246304028023 23.309101302261944 24 32.34886421381729 20.291659754796765 22.676944234231197 24.68253179715475 25 29.941738954977794 20.514225613062802 21.240573777846446 28.30346165411296 26 26.963645825719336 21.191902541977846 23.582658158537797 28.261793473765024 27 25.074265215341768 19.622867952573557 24.256220792334453 31.046646039750218 28 26.824241251761162 22.797265481895572 21.689513405817877 28.688979860525393 29 31.005328012178314 22.693445183801757 21.07228159986554 25.228945204154385 30 29.78876596094834 20.31879659493933 23.851531721434206 26.040905722678126 31 32.11286124277098 20.703789572187713 22.675543623127066 24.507805561914235 32 35.34980481171191 20.12770071741927 21.960575423564492 22.561919047304325 33 34.66845127864852 19.692767200489165 22.641578803851857 22.997202717010463 34 29.519673552566907 21.29953075151102 27.912122157798976 21.268673538123103 35 27.152421941098176 25.546008542852356 27.030218622262623 20.271350893786845 36 27.110009686101165 28.038571079043926 22.815954886316337 22.03546434853857 37 29.951368156318704 27.73336916563408 19.80267140306655 22.512591274980664 38 30.77431471819048 26.32824984451028 20.789051773151773 22.108383664147464 39 31.359463776038783 24.602040427764138 20.637960850293492 23.400534945903583 40 29.125138912171618 22.917105269492897 20.180661324794276 27.777094493541217 41 25.907147362233484 24.77685420119866 22.034632735695492 27.281365700872364 42 24.15734640220211 23.697902190949687 22.255141446402334 29.889609960445867 43 24.361266625144385 21.20420165823601 23.76193637986674 30.672595336752867 44 25.05522565814497 20.265792218467322 23.880419325456938 30.798562797930774 45 28.303417885015957 20.989251622848695 23.38622245118323 27.32110804095212 46 27.371354964312864 24.70038958873243 22.221307934418135 25.706947512536566 47 25.31341956137237 22.52292078187364 24.37247151397744 27.791188142776548 48 26.310654667514623 21.205646038437145 26.43097591517899 26.052723378869242 49 28.985778107310445 19.849679413248992 24.929258196967062 26.235284282473497 50 25.932008209331837 21.04969674581141 25.27328329941958 27.745011745437182 51 24.441495379952965 20.987894780841565 26.735346215745757 27.83526362345971 52 24.628695807839655 21.31213625144821 26.119033560830513 27.94013437988162 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 28.0 4 56.0 5 38.0 6 20.0 7 25.5 8 31.0 9 192.5 10 354.0 11 955.0 12 1556.0 13 2314.5 14 2661.0 15 2249.0 16 2387.5 17 2526.0 18 3135.5 19 3745.0 20 3778.0 21 3811.0 22 4014.5 23 4218.0 24 5153.0 25 6088.0 26 8020.5 27 9953.0 28 11355.5 29 12758.0 30 16104.5 31 19451.0 32 20104.0 33 20757.0 34 27426.0 35 34095.0 36 34251.5 37 34408.0 38 39787.5 39 48617.5 40 52068.0 41 57864.5 42 63661.0 43 66462.0 44 69263.0 45 75957.0 46 82651.0 47 87420.0 48 92189.0 49 96822.5 50 101456.0 51 112268.5 52 123081.0 53 131531.5 54 139982.0 55 157041.5 56 174101.0 57 198551.5 58 223002.0 59 226791.5 60 230581.0 61 226989.5 62 223398.0 63 190332.5 64 139758.5 65 122250.0 66 99094.0 67 75938.0 68 63674.0 69 51410.0 70 45944.5 71 40479.0 72 35858.5 73 31238.0 74 22951.5 75 14665.0 76 10844.5 77 7024.0 78 4863.0 79 2702.0 80 2137.0 81 1572.0 82 927.5 83 283.0 84 170.0 85 57.0 86 42.0 87 27.0 88 28.5 89 26.5 90 23.0 91 13.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2284717.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.602689090229648 #Duplication Level Percentage of deduplicated Percentage of total 1 65.89722593895314 5.009961207224771 2 10.12884615633122 1.5401293633870772 3 4.5080315356595175 1.0281948652370942 4 2.289145033960516 0.6961463190257996 5 1.2408089507072204 0.47167423363005406 6 0.8038981356308856 0.36670725512501323 7 0.5339171293882824 0.28414441542809177 8 0.37982561962262906 0.23101568755957425 9 0.32341487424256515 0.22129404624197493 >10 6.378882802918293 14.000562872719149 >50 4.766570000487384 25.74891119091599 >100 2.6004408089219284 34.942969085094276 >500 0.09530727158656105 4.739379085275162 >1k 0.0482568463729423 6.372003092820794 >5k 0.004222474057632451 2.2406847299065173 >10k+ 0.0012064211593235577 2.106222550408658 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 26540 1.1616318344897858 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 19387 0.8485514836191966 No Hit AACCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 8673 0.3796093783168769 No Hit AACCTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8450 0.3698488696849544 No Hit AACCTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 7710 0.3374597379018933 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 7481 0.32743661468794605 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 6125 0.2680857191503368 No Hit AACCTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 5340 0.23372697800208955 No Hit AACCTAGGGGGGGCTGGTGAGATGGCTCAGAGGGTAAGAGTACCCCACCTGA 5080 0.22234701278101401 No Hit AACCTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4388 0.1920587976541515 No Hit AACCTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 4011 0.17555784808359198 No Hit AACCTAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 3537 0.1548112961036312 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 3505 0.15341068499949884 No Hit AACCTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3361 0.14710793503090316 No Hit AACCTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3179 0.13914195937615031 No Hit AACCTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2995 0.13108844552738919 No Hit AACCTAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2801 0.12259724070858666 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 2735 0.11970848030631366 No Hit AACCTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2683 0.11743248726209855 No Hit AACCTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2529 0.11069204632346151 No Hit AACCTAGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTGCTC 2519 0.11025435535342014 No Hit AACCTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2438 0.10670905849608507 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.03090098248492045 0.0 0.0 0.0 0.0 7 0.034314972051243106 0.0 0.0 0.0 0.0 8 0.03554050676735893 0.0 0.0 0.0 0.0 9 0.04600132095134758 0.0 0.0 0.0 0.0 10 0.07134362811674269 0.0 0.0 0.0 0.0 11 0.09134610544763312 0.0 0.0 0.0 0.0 12 0.09773639361023706 0.0 0.0 0.0 0.0 13 0.10487075642191133 0.0 0.0 0.0 0.0 14 0.11668841261302822 0.0 0.0 0.0 0.0 15 0.12618630666292588 0.0 0.0 0.0 0.0 16 0.1368659663319352 0.0 0.0 0.0 0.0 17 0.14671401315786595 0.0 0.0 0.0 0.0 18 0.15638698359578013 0.0 0.0 0.0 0.0036766041483474758 19 0.1661474922277026 0.0 0.0 0.0 0.0036766041483474758 20 0.17827153209784843 0.0 0.0 0.0 0.0036766041483474758 21 0.18811957892377917 0.0 0.0 0.0 0.0036766041483474758 22 0.197354858391652 0.0 0.0 0.0 0.0036766041483474758 23 0.2088223618067358 0.0 0.0 0.0 0.0036766041483474758 24 0.220421172512832 0.0 0.0 0.0 0.0036766041483474758 25 0.23101329398783307 0.0 0.0 0.0 0.0036766041483474758 26 0.24261210469392927 0.0 0.0 0.0 0.0036766041483474758 27 0.25132215499775246 0.0 0.0 0.0 0.0036766041483474758 28 0.26637872436717547 0.0 0.0 0.0 0.0036766041483474758 29 0.2761392329990979 0.0 0.0 0.0 0.0036766041483474758 30 0.28769427460818997 0.0 0.0 0.0 0.0036766041483474758 31 0.2963167867180049 0.0 0.0 0.0 0.0036766041483474758 32 0.30774052103608457 0.0 0.0 0.0 0.0036766041483474758 33 0.31815756612306906 0.0 0.0 0.0 0.0036766041483474758 34 0.32721776920292533 0.0 0.0 0.0 0.0036766041483474758 35 0.34406887154951793 0.0 0.0 0.0 0.0036766041483474758 36 0.3589503645309244 0.0 0.0 0.0 0.0036766041483474758 37 0.3724750155052026 0.0 0.0 0.0 0.0036766041483474758 38 0.3839425189202864 0.0 0.0 0.0 0.0036766041483474758 39 0.39330910567917166 0.0 0.0 0.0 0.0036766041483474758 40 0.4033322288931189 0.0 0.0 0.0 0.0036766041483474758 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTGAC 30 1.8622159E-6 46.0 15 CGCGAAT 25 3.418223E-5 46.0 40 TAACGCG 30 1.8622159E-6 46.0 34 CGACTAA 60 0.0 46.0 22 ACGGTAT 50 1.6370905E-11 46.0 12 TAGGGAT 23650 0.0 44.66765 5 CTAGGGA 67050 0.0 44.54899 4 AACCTAG 234610 0.0 44.473595 1 ACCTAGG 233455 0.0 44.45422 2 TAGGGAG 21610 0.0 44.446087 5 CCTAGGG 230835 0.0 44.434685 3 CTAGGGG 145465 0.0 44.35404 4 TAGGGGA 36195 0.0 44.328773 5 TAGGGGG 67255 0.0 44.272995 5 TAGGGGT 18915 0.0 44.030136 5 TAGGGGC 23640 0.0 43.86929 5 AGGGATT 8120 0.0 43.762314 6 TAGGGAC 11180 0.0 43.675312 5 CGATTAG 95 0.0 43.57895 42 AGGGGGG 36635 0.0 43.52641 6 >>END_MODULE