##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527687_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 505141 Sequences flagged as poor quality 0 Sequence length 50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53205936560287 33.0 31.0 34.0 31.0 34.0 2 32.889308133768594 34.0 31.0 34.0 31.0 34.0 3 31.822803929991824 31.0 31.0 34.0 31.0 34.0 4 36.27592691941458 37.0 37.0 37.0 35.0 37.0 5 36.30030229183535 37.0 37.0 37.0 35.0 37.0 6 36.44518659146654 37.0 37.0 37.0 35.0 37.0 7 36.50090964700945 37.0 37.0 37.0 35.0 37.0 8 36.66814414193265 37.0 37.0 37.0 35.0 37.0 9 38.758558501487705 39.0 39.0 39.0 39.0 39.0 10 38.269889001288746 39.0 39.0 39.0 37.0 39.0 11 37.98555254869432 39.0 38.0 39.0 35.0 39.0 12 37.20169616008204 39.0 35.0 39.0 35.0 39.0 13 37.03051029316567 39.0 35.0 39.0 34.0 39.0 14 37.72902615309389 40.0 37.0 40.0 33.0 40.0 15 37.76397481099337 40.0 37.0 40.0 33.0 40.0 16 37.796201456623 40.0 36.0 40.0 33.0 40.0 17 37.63558887518534 40.0 36.0 40.0 33.0 40.0 18 37.50557567095128 40.0 36.0 40.0 33.0 40.0 19 37.37310176762528 40.0 36.0 40.0 32.0 40.0 20 37.28429883933397 40.0 36.0 40.0 32.0 40.0 21 37.22973189663876 39.0 35.0 40.0 32.0 40.0 22 37.348958013703104 40.0 35.0 40.0 33.0 40.0 23 37.34173824734084 39.0 35.0 40.0 33.0 40.0 24 37.28823833345541 39.0 35.0 40.0 33.0 40.0 25 37.31244345638149 39.0 35.0 40.0 33.0 40.0 26 37.21562296467719 39.0 35.0 40.0 33.0 40.0 27 37.03794584086423 39.0 35.0 40.0 33.0 40.0 28 36.85494545087411 39.0 35.0 40.0 32.0 40.0 29 37.03032024721811 39.0 35.0 40.0 33.0 40.0 30 37.200840953317986 40.0 35.0 40.0 33.0 40.0 31 37.26392433003854 40.0 35.0 40.0 33.0 40.0 32 37.23381590486617 40.0 35.0 40.0 33.0 40.0 33 37.088420856750886 39.0 35.0 40.0 33.0 40.0 34 36.755660300787305 39.0 35.0 40.0 32.0 40.0 35 36.71259509721048 39.0 35.0 40.0 32.0 40.0 36 36.705169447738356 39.0 35.0 40.0 32.0 40.0 37 36.654211398401635 39.0 35.0 40.0 32.0 40.0 38 36.63885133061858 39.0 35.0 40.0 32.0 40.0 39 36.505627141728745 38.0 35.0 40.0 32.0 40.0 40 36.304425892968496 38.0 35.0 40.0 32.0 40.0 41 36.125925236716085 38.0 35.0 40.0 31.0 40.0 42 36.09995822948444 38.0 35.0 40.0 31.0 40.0 43 35.98906641907903 37.0 35.0 40.0 31.0 40.0 44 35.72676539817596 37.0 35.0 40.0 31.0 40.0 45 35.643952876523585 37.0 35.0 40.0 31.0 40.0 46 35.505070861403055 36.0 35.0 40.0 30.0 40.0 47 35.38883796801289 36.0 34.0 40.0 30.0 40.0 48 35.3038240808012 36.0 34.0 40.0 30.0 40.0 49 35.20461019794473 35.0 34.0 40.0 30.0 40.0 50 34.68646179977472 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 11.0 16 26.0 17 60.0 18 84.0 19 120.0 20 234.0 21 375.0 22 570.0 23 872.0 24 1177.0 25 1642.0 26 2391.0 27 3095.0 28 4246.0 29 5642.0 30 7723.0 31 10176.0 32 13526.0 33 20051.0 34 47426.0 35 42821.0 36 49075.0 37 78769.0 38 154130.0 39 60896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.39482243571597 0.5190629942926827 0.058597500499860435 0.027517069491488518 8 99.65178039398901 0.20390346457721703 0.06117103937316511 0.08314510206061278 9 98.37134582225558 0.8385777436398946 0.2684399009385498 0.5216365331659872 10 60.928532825488325 29.22035629655878 3.310758778242114 6.540352099710773 11 40.94421161616262 23.30379042683132 19.520490318544724 16.23150763846134 12 35.56987059058758 14.995219156631515 23.73238363150091 25.702526621279997 13 27.503805868064564 15.538235858898803 28.242807453760438 28.715150819276204 14 26.149134598062716 17.48541496334687 30.997879799897454 25.36757063869296 15 29.582631384108595 17.92351046539481 28.838284756137394 23.6555733943592 16 34.102953432803915 18.912541250858673 23.720505759777964 23.263999556559455 17 32.90526803407366 20.666704939808884 22.93577436794875 23.49225265816871 18 33.04305134605981 20.59246824154048 21.998214359950985 24.366266052448722 19 30.30539987844978 22.68732888441049 22.899942788251202 24.10732844888853 20 32.96287571192993 22.408396863450005 22.456898172985365 22.17182925163469 21 31.827747104273858 22.588544584581335 23.755347516831936 21.828360794312875 22 30.073979344381073 20.709861207068915 25.272349700380687 23.943809748169322 23 30.394087987314432 22.30743495380498 24.351616677323758 22.94686038155683 24 31.07666968232632 20.034010306033366 23.594402354986034 25.29491765665428 25 29.99776300082551 21.52290152650448 22.25517231822402 26.224163154445986 26 27.59447362221637 20.842497441308467 23.867395440085044 27.695633496390116 27 24.89898859922279 20.157738136480706 23.99468663204927 30.94858663224723 28 27.001173929655288 23.123444741171276 21.808366376912584 28.067014952260855 29 28.739302491779522 22.70554162105234 22.004351260341174 26.550804626826963 30 29.303303434090676 20.414102201167594 24.584422963093473 25.698171401648253 31 32.66276148639687 20.39945282604263 22.509358773095038 24.428426914465465 32 34.63448819240568 20.043116674354287 22.888064916528254 22.43433021671177 33 33.17984483540239 19.58067153527431 24.031705998919115 23.207777630404184 34 29.769707863744976 21.902795457109995 27.33514008959875 20.992356589546286 35 27.89320209604843 26.194468475138628 25.736180591161677 20.17614883765127 36 27.458471990988652 27.229031102207106 22.672481544756813 22.64001536204743 37 30.896521961194995 27.062542933557165 19.880389831749948 22.160545273497895 38 31.515755007017844 27.181717579844044 19.921368489194105 21.381158923944007 39 31.8722891232349 23.938464705893995 20.310764717177975 23.878481453693126 40 29.09148138836483 23.972910533890538 19.986498819141584 26.949109258603045 41 26.09370453002231 25.24423873730305 21.9128916480745 26.74916508460014 42 24.724581849424222 22.248045595190256 22.197762604896454 30.829609950489072 43 24.310242090822168 21.13904830532465 25.444380875834664 29.106328728018514 44 25.68767928162632 20.06509073704174 23.88303463785359 30.364195343478357 45 27.785113463369633 21.684638546465244 22.808087246927094 27.722160743238028 46 26.92990669931762 22.38780855246357 23.064847240671416 27.6174375075474 47 25.25829421884187 22.469369938294456 25.20939698024908 27.0629388626146 48 28.138480147127236 21.703049247635807 25.090024369433483 25.06844623580347 49 27.189042267406528 20.988199334443255 24.81722924886319 27.00552914928703 50 25.63739629133252 21.182798466170834 26.436381129229265 26.743424113267384 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 4.5 6 9.0 7 5.5 8 2.0 9 2.0 10 2.0 11 71.5 12 141.0 13 438.0 14 735.0 15 917.0 16 1099.0 17 1041.0 18 983.0 19 793.0 20 603.0 21 635.5 22 668.0 23 855.5 24 1043.0 25 1243.0 26 1443.0 27 1658.0 28 1873.0 29 2247.0 30 2621.0 31 2986.0 32 3351.0 33 4396.5 34 5442.0 35 5838.0 36 6234.0 37 6866.5 38 7499.0 39 8530.0 40 9561.0 41 10240.0 42 10919.0 43 11393.0 44 11867.0 45 13094.0 46 14321.0 47 15189.0 48 16057.0 49 17747.0 50 19437.0 51 22383.0 52 25329.0 53 26954.0 54 28579.0 55 30835.5 56 33092.0 57 38095.5 58 43099.0 59 49228.0 60 55357.0 61 56363.5 62 57370.0 63 54280.5 64 51191.0 65 42447.5 66 33704.0 67 26660.5 68 19617.0 69 16806.5 70 13996.0 71 11785.5 72 9575.0 73 7952.5 74 6330.0 75 6852.5 76 7375.0 77 5188.5 78 3002.0 79 1946.0 80 890.0 81 739.0 82 588.0 83 332.0 84 76.0 85 57.0 86 38.0 87 26.5 88 15.0 89 10.5 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 505141.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.031537729069704 #Duplication Level Percentage of deduplicated Percentage of total 1 67.82911753101574 6.12601234110872 2 9.024155012932358 1.630039929445442 3 3.5596861163473763 0.9644831839031082 4 1.7842269080706679 0.6445725054984648 5 0.881153829292885 0.39790870271864687 6 0.6027793608346851 0.3266414723809788 7 0.3770110911402394 0.23834929257375664 8 0.3660514663977905 0.2644806103642349 9 0.315637192582526 0.2565620292156051 >10 8.693174345710403 23.178874809211685 >50 4.688527464819605 29.16136286700149 >100 1.7842269080706679 27.323856111461946 >500 0.061373898557713386 3.7543972870940987 >1k 0.03287887422734646 5.732458858021819 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGTCACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4985 0.9868531756479874 No Hit TGTCACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3734 0.7391995502245907 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3198 0.6330905628329515 No Hit TGTCACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2436 0.4822415919515541 No Hit TGTCACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2325 0.46026752926410647 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1580 0.31278395537087667 No Hit TGTCACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1491 0.29516511231517534 No Hit TGTCACGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 1281 0.25359256128486896 No Hit TGTCACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1247 0.24686176730853363 No Hit TGTCACGGGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCT 1213 0.24013097333219832 No Hit TGTCACGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 1176 0.23280628576971577 No Hit TGTCACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1151 0.22785717255182214 No Hit TGTCACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1070 0.21182204572584687 No Hit TGTCACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1065 0.2108322230822681 No Hit TGTCACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1005 0.19895435135932343 No Hit TGTCACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 983 0.19459913172757706 No Hit TGTCACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 879 0.1740108207411396 No Hit TGTCACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 872 0.1726250690401294 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCGACTGT 866 0.17143728186783494 No Hit TGTCACGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 855 0.16925967205196174 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 846 0.16747799129352003 No Hit TGTCACGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 835 0.16530038147764683 No Hit TGTCACGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 771 0.1526306516398392 No Hit TGTCACGGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTG 751 0.14867136106552428 No Hit TGTCACGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTG 730 0.14451410596249364 No Hit TGTCACGGGGGTTTTTCAGGACGCTTTGCAAGGGTAGCTGGGGTGAATTT 705 0.13956499274460002 No Hit TGTCACGGGGCGTTTCCGTTGCACGGAGTTGTGAAGAGTACTGCCTTGTC 673 0.13323012782569618 No Hit TGTCACGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 667 0.13204234065340173 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 650 0.12867694366523408 No Hit TGTCACGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAA 645 0.12768712102165533 No Hit TGTCACGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 620 0.12273800780376173 No Hit TGTCACGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 603 0.11937261081559405 No Hit TGTCACGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 591 0.11699703647100512 No Hit TGTCACGGGAAGGAAAGTATACCCCAAGTGGCCAGTCTGGAGCCGCAGCC 582 0.11521535571256342 No Hit TGTCACGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCT 570 0.11283978136797448 No Hit TGTCACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 569 0.11264181683925874 No Hit TGTCACGGGGGGCTGGTGAGATGGCTCAGCAGGCAAGAGCACCCGACTGC 562 0.11125606513824854 No Hit TGTCACGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 554 0.10967234890852257 No Hit TGTCACGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC 529 0.10472323569062897 No Hit TGTCACGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 528 0.10452527116191321 No Hit TGTCACGGGGGGCTGGCGAGATGGCTCAGTAGGTAAGAGCACCCGACGGC 520 0.10294155493218726 No Hit TGTCACGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 506 0.10017005153016682 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.009898226435787236 0.0 0.0 0.0 0.0 8 0.01346158795267064 0.0 0.0 0.0 0.0 9 0.01385751701010213 0.0 0.0 0.0 0.0 10 0.026131317790478302 0.0 0.0 0.0 0.0 11 0.032268218180666386 0.0 0.0 0.0 0.0 12 0.03820715404213873 0.0 0.0 0.0 0.0 13 0.04751148689177873 0.0 0.0 0.0 0.0 14 0.05325245822453533 0.0 0.0 0.0 0.0 15 0.06414050730390129 0.0 0.0 0.0 0.0 16 0.07245501750996257 0.0 0.0 0.0 0.0 17 0.07938377601501363 0.0 0.0 0.0 0.0 18 0.08750032169235916 0.0 0.0 0.0 0.0 19 0.0995761579440196 0.0 0.0 0.0 0.0 20 0.11244385231054299 0.0 0.0 0.0 0.0 21 0.1199665044017413 0.0 0.0 0.0 0.0 22 0.13045862442367576 0.0 0.0 0.0 0.0 23 0.1399609218020315 0.0 0.0 0.0 0.0 24 0.15381843881213364 0.0 0.0 0.0 0.0 25 0.1625288780756264 0.0 0.0 0.0 0.0 26 0.17203117545398217 0.0 0.0 0.0 0.0 27 0.18272126000463237 0.0 0.0 0.0 0.0 28 0.19420320267014557 0.0 0.0 0.0 0.0 29 0.20231974834749109 0.0 0.0 0.0 0.0 30 0.21182204572584684 0.0 0.0 0.0 0.0 31 0.22112637857548684 0.0 0.0 0.0 0.0 32 0.2306286759538426 0.0 0.0 0.0 0.0 33 0.24072486691834558 0.0 0.0 0.0 0.0 34 0.2488414125956911 0.0 0.0 0.0 0.0 35 0.26190707149093023 0.0 0.0 0.0 0.0 36 0.2743788368000222 0.0 0.0 0.0 0.0 37 0.28526688587938814 0.0 0.0 0.0 0.0 38 0.29635289948746985 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCAT 30 2.5248883E-6 44.000004 34 CGAACTA 30 2.5248883E-6 44.000004 40 ATTAACG 30 2.5248883E-6 44.000004 29 AGTGCGT 30 2.5248883E-6 44.000004 15 ATATACG 30 2.5248883E-6 44.000004 34 ACGTGGG 30 2.5248883E-6 44.000004 10 CCATAAC 30 2.5248883E-6 44.000004 34 TATTAAC 30 2.5248883E-6 44.000004 28 CGACTGA 30 2.5248883E-6 44.000004 44 TATACGG 30 2.5248883E-6 44.000004 35 ACGCGAA 20 7.852286E-4 44.0 25 CGGGTAT 55 1.8189894E-12 44.0 6 AAGTACG 20 7.852286E-4 44.0 38 AGCGTAC 25 4.439286E-5 44.0 36 AACCGAC 20 7.852286E-4 44.0 26 TCGCATA 20 7.852286E-4 44.0 25 CGTATTA 20 7.852286E-4 44.0 30 CATATAG 40 8.296411E-9 44.0 13 CGTATCG 25 4.439286E-5 44.0 28 GTATTAC 20 7.852286E-4 44.0 31 >>END_MODULE